Rana temporaria (common frog): 120917061
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Entry
120917061 CDS
T07929
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120917061 (LRRC4C)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
LRR_14
ig
LRR_9
V-set
Ig_2
LRRNT
LRR_LRWD1
LRR_NXF1-5
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
120917061
NCBI-ProteinID:
XP_040184000
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All DBs
Position
11:14703016..15059209
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AA seq
639 aa
AA seq
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MLNKMTLHPQQMMIGPRFNRALFDPLFIVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICTRRNLREVPDGISTNTRQLNLHENQIQIIKVDSFKHLRHLEVLQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
EMKRLSYISEGAFEGLSNLRYLNLGMCNLREIPNLTPLVKLDELDLSGNHLSVLRPGSFQ
GLTNLQKLWIMHSQIQVIERNAFDDLQSLVELNLAHNNLTTLPHDLFTPLHNLQRIQLHH
NPWNCNCDILWLSWWLKEIVTTGSTCCARCSTPPSLKGTHIAELDQNYFTCYAPVILEPP
TDLNVTEGMAAELKCRASTSLTYVSWITPNGSIMTHGAYKVRIAVLNDGTLNFTSVTMRD
TGLYTCIVSNSAGNTTASATLNVTAIDNGYTYFSTVTVETMEPSQDEARTTEHHVGPTPV
LDWETTNATTSLMSQSTRSTEKPFTIPVTDANGGMPGIDEVMKTTKIIIGCFVAITLMAA
VMLVIFYKMRKQHHRKNHHAPTRTVEIINVDDELTADTPIESHLPMPAIEHEHLNHYNSY
KSPFNHTTTVNTINSIHSSVHEPLLIRANSKDNVQETQI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacattacatccacagcagatgatgataggtcctaggttcaacagg
gccttatttgaccccctttttattgtgctgttggctcttcaacttctcgtggtggccggg
ttggttagggctcagacctgcccttctgtatgttcctgcagtaaccagtttagcaaagtc
atttgcaccagacggaacctgcgagaagtcccggatggtatctccaccaacacgaggcaa
cttaacctccacgaaaaccagatccaaataatcaaagtggacagttttaagcatttgcga
cacttagaagttttacagttgagtaggaatcacattaggacgattgaaatcggggccttt
aacggcttggcgaacctgaacactttggagctgtttgacaatcgtctgactaccattcca
aatggagcttttgaatatttgtcaaaactaaaggagctttggctgaggaacaacccgatt
gaaagcattccttcctatgcttttaatcgcatcccttctctgcgcagactggatttgggg
gagatgaaaagattgtcctatatttcggaaggagcttttgaagggctttcaaaccttaga
tatctgaaccttgggatgtgcaacctaagagaaattcccaatcttactcctcttgtaaag
ctagatgaactagacctttctgggaaccatctttcagttctgaggccagggtcatttcaa
ggattaaccaatttacaaaaactttggatcatgcattcccaaattcaggtgattgagagg
aatgcctttgatgaccttcagtcacttgtggagctaaatttggcacataataatctaact
acgctgcctcatgacctttttacacctttacataatttgcaaaggattcagttgcaccac
aacccttggaactgcaattgcgacattctttggcttagttggtggttaaaggaaatagtc
actacaggcagcacatgctgtgctcgttgtagcacgcctcccagtttaaaaggtacccac
attgctgagttggaccagaactattttacatgctatgccccagtgattttggagccaccc
actgatctgaatgttacagaagggatggctgctgaactcaaatgtcgggcatcaacatca
ttgacttatgttagctggattacaccaaatggatccataatgactcacggggcttacaaa
gtgcgaattgctgtgctcaatgatggcacactaaactttacatctgtaacgatgcgagat
acaggattgtacacatgtatcgtcagtaactccgcagggaacaccactgcctcggcgaca
ctgaatgtgactgcgattgataatggctatacgtacttttccactgtcactgtagagact
atggaaccatctcaggacgaggccagaaccacagaacatcatgtgggtcctacaccagtc
cttgactgggaaaccacaaatgcaaccacctctctaatgtcgcagagcacaaggtccact
gagaaacccttcaccatcccggttacggatgcaaatggtggaatgccagggatagacgaa
gttatgaagaccaccaaaattatcattggctgttttgtggccatcacccttatggcagct
gttatgttggtaattttctataagatgaggaaacagcaccatcggaaaaaccatcatgct
cctacgcggactgttgagattattaacgtggatgacgaactcacagctgacacgcccatt
gagagccacttacccatgcccgcaatagaacatgagcatttaaaccattataactcttat
aagtccccttttaatcacacgacaaccgtgaacacaataaattcaatacacagctcagtg
catgaacctttattgattcgcgcaaactctaaggacaatgtacaggagacgcagatctaa
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