Rana temporaria (common frog): 120917067
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Entry
120917067 CDS
T07929
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
120917067 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120917067 (RAG1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120917067 (RAG1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120917067 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
zf-RING_2
zf-RING_10
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120917067
NCBI-ProteinID:
XP_040184008
LinkDB
All DBs
Position
11:complement(17022242..17031274)
Genome browser
AA seq
1046 aa
AA seq
DB search
MDFTLVSVPWDPVSTKMHQPYRKFSDWKFKLFRVKSLEKSPSQEEEDDTGVSSISSQETS
PYFDVSSDDLSQETLSQSPSECIRQEESMMDNDSELIRIEEDAHMATLQHLCRICGVSFK
MDQQSRQYPVHGPVDDETQEVLRRREKKATSWPELISKVFKVDVRGDLDTIHPTRFCHNC
WTIMHQKFTNTSSEVYFPRNKVVEWKSHSTPCEVCNSSKTRGKRKGGFLHNSTLPKKRKI
SIENGKKNKNGNTTSFWKNSKALNQIKTICKKIHLDANLLVVDYPSDFVKSVTCQVCEHI
LSDPVQTACKHLFCRNCILKYIKIMGCYCPACRYTCFPTDLTTPVKSYLNVLNSLVLKCT
VAGCDEEVSLGKYSHHISKHKEIKGKEAYAHINKGGRPRQHLLSLTRRAQKHRLRELKMQ
VKTFSDKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMEGRGAGLHPAVCLAIRVNT
FLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKALLPGYHPFEWKPPLKNVSTSTDVGI
MDGLSGLNRSVDEYPVEAVSKRFRYDVALVSTLKDMEEDILEGLKSQDLEEYLSGPFTVV
IKESCDGMGDVSEKHGSGPPVPEKAVRFSFTIMTISIPNNSGSVRIFEESKPNSELCCKP
LCLMLADESDHETLTAILSPLIAEREAMKSSELMLEIGGILRNFKFVFRGTGYDEKLVRE
VEGLEASGSIYICTLCDATRLEASQNLVFHSITRSHSENLQRYETWRANPHNESADELRD
RVKGVSAKPFIETLPSIDALHCDIGNAAEFYRIFQLEIGEVYRSPNATKEERKKWQTILD
KHLRKKMNLKPIMRMNGNFARKLMSKETIEAVCELVQCEERQLALKELMDLYLKMKPVWR
SSCPAKECPDLLCQYSYHSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIG
AWASEGNESGNKLFRRFRKMNARQSKIYEMEDVLKHHWLYTSKYLQKFMNAHINLKNQGF
TVDIDPQATQEEAVDCSIDNLDSMEF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggattttaccttggtctctgtgccatgggatccagtatccaccaaaatgcaccaacca
tataggaaattctctgactggaagtttaagctgtttcgagtgaaatctttggaaaagtcc
ccctctcaagaggaagaagatgatactggagtgtcctcaatcagctcccaggagacatca
ccttattttgatgtcagttcagatgaccttagtcaggagactttatcgcaatcaccttca
gaatgcataaggcaggaagaaagtatgatggacaatgactcagagttgataagaattgag
gaagatgctcacatggccactttacaacacctgtgccgtatttgtggtgtttcttttaaa
atggatcaacagagcagacaatatccagtccacgggcctgtggacgatgagactcaagaa
gtcctaagacggagagagaagaaagccacctcttggcctgaacttatctccaaggttttc
aaagttgacgtcaggggtgacttggacactattcacccaacgcgtttctgtcataactgc
tggactatcatgcatcagaagttcacaaatacctccagcgaggtttatttcccccgcaat
aaagttgtggagtggaagtctcactcgaccccgtgtgaggtttgcaattcctccaaaacc
cgggggaaaagaaaaggaggatttctccacaattcgacccttcccaaaaaacgcaaaatc
agcatcgagaatggaaaaaagaacaaaaatggaaataccacatccttctggaagaacagt
aaagctctaaatcagataaagactatctgcaaaaaaatccaccttgatgccaatctcctg
gttgtggactatccttctgactttgtcaagtcggtgacttgccaagtgtgtgaacatatt
ctttccgatccagtgcaaactgcctgcaagcacctgttctgcaggaactgcattcttaag
tatatcaagatcatgggctgttactgcccagcctgcagatacacgtgcttcccaactgac
cttacaacgccagtgaaatcttatctgaatgttttaaattccttggtgctaaaatgtaca
gtggctgggtgtgatgaagaggtctctcttggaaaatactctcaccacatctctaaacat
aaggagattaaaggtaaagaagcctatgctcatatcaacaaaggtggtcgccccagacaa
cacctgctgtcgctgacaaggagagctcaaaaacatcgtctaagagagctaaagatgcaa
gtaaagaccttttctgacaaagaagaagggggagatgttaaatcagtttgcttgactctc
tttctgctggccctaagagcaaggaatgagcacaggcaagcagatgagttagaggccatc
atggaaggcagaggagcaggtcttcatcctgctgtttgtcttgcaataagagtaaacacc
ttcctgagctgcagccagtaccacaaaatgtacagaacagtaaaagccataactggtcgt
caaatctttcagccactccatgctctcagaaatgcagagaaggccttgctgccagggtat
catccatttgaatggaagcctcctctgaagaatgtctctaccagtacagatgttggtatc
atggatgggctttcaggactgaatcgttcagttgatgaatacccagtggaggctgtttct
aaaaggtttaggtatgatgtagccttagtttcaactctaaaagacatggaagaggatatt
ctcgaaggcttaaaatctcaggatttggaggaatacctaagcggtccttttactgtggtg
atcaaagagtcttgtgatggaatgggagatgtcagcgagaagcatggcagtggtccacca
gttcctgagaaagcagtacgtttctcattcacaatcatgaccatcagcattcccaacaac
agtgggtctgttagaatctttgaagagtccaaaccaaactctgaactttgctgcaaaccc
ctttgtctaatgcttgctgatgaatcagaccacgaaactctaacagccatcttgagccct
ttaatagctgagagagaagccatgaaatccagtgaactaatgttggaaattggtggaatc
ctcagaaatttcaaatttgtcttccgtggcacagggtatgatgagaagcttgttagagaa
gtagaaggactggaagcctcaggctctatctatatttgtaccctctgtgatgctactcgg
ctggaagcttctcagaacttagtcttccattctattaccagaagtcattctgagaactta
cagcgctatgagacatggagagccaaccctcacaatgaatctgctgacgagcttcgtgac
agagtaaaaggagtttcagcaaagccatttattgaaacccttccgtccattgatgcctta
cattgtgatattggaaatgcagctgaattttacaggatatttcagctagaaataggggag
gtctacagaagtcccaatgcaaccaaagaagagagaaagaaatggcaaactatacttgac
aaacaccttagaaagaagatgaacttaaaacccataatgagaatgaatggaaactttgcc
cggaagcttatgagtaaagagactatagaagcagtgtgcgaattagtgcaatgtgaagag
agacaactggcgctcaaagaactaatggacttgtacctcaaaatgaagccagtctggcgc
tcttcatgccctgccaaagaatgccctgatctgctatgccaatatagttatcactctcaa
cgttttgcagaacttttatccacaaagttcaagtacagatacgagggcaagattaccaac
tattttcacaaaacccttgcccacgttccagagatcattgaacgcgatggctccattgga
gcctgggccagtgaaggaaacgagtctggcaacaagttattcagacgtttcagaaaaatg
aatgctcgtcagtccaagatatacgagatggaagatgtgttgaagcatcactggctgtac
acctccaaatatctacagaagtttatgaatgcccatattaatctaaaaaatcaaggtttt
acggtagatatagatcctcaagcaacacaagaggaagctgtagattgttctattgataat
ttagattcaatggaattctga
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