KEGG   Rana temporaria (common frog): 120917075
Entry
120917075         CDS       T07929                                 
Symbol
CD44
Name
(RefSeq) CD44 antigen isoform X1
  KO
K06256  CD44 antigen
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120917075 (CD44)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtem04147]
    120917075 (CD44)
   04090 CD molecules [BR:rtem04090]
    120917075 (CD44)
   00535 Proteoglycans [BR:rtem00535]
    120917075 (CD44)
   00536 Glycosaminoglycan binding proteins [BR:rtem00536]
    120917075 (CD44)
Exosome [BR:rtem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120917075 (CD44)
  Exosomal proteins of other body fluids (saliva and urine)
   120917075 (CD44)
  Exosomal proteins of colorectal cancer cells
   120917075 (CD44)
  Exosomal proteins of bladder cancer cells
   120917075 (CD44)
CD molecules [BR:rtem04090]
 Proteins
  120917075 (CD44)
Proteoglycans [BR:rtem00535]
 Cell surface proteoglycans
  Others
   120917075 (CD44)
Glycosaminoglycan binding proteins [BR:rtem00536]
 Hyaluronan
  Cell surface receptors
   120917075 (CD44)
SSDB
Motif
Pfam: Xlink
Other DBs
NCBI-GeneID: 120917075
NCBI-ProteinID: XP_040184020
LinkDB
Position
11:complement(18128309..18219069)
AA seq 400 aa
MSKLMWMVCFGLCCWIGVSQAQYDISCRFKGVFHVEKGPRYNQTAEEARKTCAELDAVIA
TEEQMEIAMESGFEICRYGWIENNTLAIPRITPNKKCANNFVGLYVQHPNLTSMWDVFCY
NASDQTERNCEKYDFKNESFVSRDPTLEGDYTDSESSKVSPTHPGLDVGPSYNDQWTASE
DVTTEPGMSTEQSEHSGDHSVLPEDGDIKNNENGEDCCATDGDDLIAVGSGEKYKNREEG
SSPGTDPSSHRNTGSNNEFPDAHDGHHSDDNAESVDPPIEDLATGDKSGSKQNRQKRMAA
IPDWLIVCVSLVCLGLIFSVCIALNARRICGQKKKLVINGNNKGCPEDGVIMEQNGDTIK
SQEMVQLVSKEQTNELGDQDEPLNQENMRNTKDVDMKIGV
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgtccaagttgatgtggatggtctgttttggattatgctgctggatcggtgtttcccag
gcacaatatgatatcagctgccggttcaagggtgttttccatgtggagaaaggcccccga
tacaatcagactgccgaggaggccaggaaaacctgcgctgagttggatgccgtcatcgca
actgaggagcagatggagattgctatggagtctggatttgagatctgcaggtatggttgg
atagagaacaacacgttggccattcctcgtatcacgccaaataaaaaatgcgctaataac
tttgtcggactctatgtgcaacaccccaaccttacttctatgtgggatgtcttttgctac
aatgcctcagaccaaactgaaaggaactgtgaaaaatatgacttcaagaacgaaagtttt
gtatcgcgtgatccaaccctggaaggagactacactgattctgagtccagtaaggtgagt
ccaactcaccctggacttgacgtaggtcccagctacaatgatcaatggactgcttcagag
gatgttacgactgaacctgggatgtctactgagcagtccgagcactcaggagatcacagt
gtactaccagaggatggagatattaaaaataatgaaaatggggaagactgttgcgctacc
gatggagatgatctgatcgcagttggctctggtgaaaaatacaagaatcgagaagaaggc
agttccccgggaacagacccatctagtcacaggaacacaggatcaaataatgagttccca
gacgcacatgatggccaccattcagatgataacgctgagagtgtggatcctcccatcgag
gatttagctaccggtgacaagtcaggatccaagcagaacagacagaagagaatggcggct
attccagattggctgatcgtgtgtgtatccctggtgtgtttgggtctgatcttctcggtc
tgcattgcactcaacgcccgcagaatatgtggccagaaaaagaaattggtgatcaatggc
aacaacaaaggatgtccagaagatggagttatcatggagcagaatggagacacaattaaa
tctcaggagatggtgcagctagtatctaaagagcagaccaatgaattaggagaccaggac
gagcctctgaaccaagagaacatgcgtaatacaaaggacgtggacatgaaaatcggagtc
tag

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