Rana temporaria (common frog): 120917087
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Entry
120917087 CDS
T07929
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120917087 (TFIP11)
Spliceosome [BR:
rtem03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120917087 (TFIP11)
Other components
Complex C specific factors
120917087 (TFIP11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
120917087
NCBI-ProteinID:
XP_040184032
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All DBs
Position
11:complement(18943942..18973055)
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AA seq
823 aa
AA seq
DB search
MSMSHLYGKDEDSDGVEMEKFEITDWDLENEFNPNRRKHYQTKEETTYGIWAERDSDDER
PSFGGKKSRDYTAPVNFISAGIRKPAAEEKANSDSDDEIPTKREELPKEFEPKKLRTGGN
FKPTQKTFAGGIKSNTDFGSWERHTKGIGQKLLQKMGYVQGRGLGKNAQGIIAPIEAKQR
KGKGAVGAYGSERTKQSLKHFPVVDSEDEEEQEFQKELSQWRKDPGGTKKKPKYAYKTVE
ELKAKGKGGKIISAPQREIAQVKVIDMTGREQKVYHSYSQFSHKHNVPGDSTAPGVKEEK
PQGFVLPELEHNLQLLIDMTEQEIIQNDRQLQYEKDMVVNLTHELEKLSEVLGREEKVIY
NLSQVLKTVEECEQRLQPGCENPLTLDECARVFQMLQDKYYEEYKMSEKSDLAVALVYPL
VKEYFKDWNPLRDPTYGIEVMTKWKDLLEEGHLSHSAQDAAMDPYHRLLWETWVPFLRNI
ISQWQPRNCPPMVDFLDSWVHLLPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHSWI
HPWLPLMQSRLEPLFSPIRNKLASALQKWHPSDSSAKLILQPWKDVFTPGSWDAFMVKNI
VPKLGMCMAEFVINPHQQHMDVFLWAMDWEGMISLSSLVGVLEKHFFSKWLQVLCSWLSN
NPNYEEITKWYLGWKSMFSDQVLAHPGIKERFNEALDIMNRAVASNVGPYMQPGARESIA
YLTQTERRKDFQYEAMQERREAESIAQRGIGVATVPMNFKDLIQSKAEEHNIVFMPLIGK
RHEGKQLYNFNRIVIYIDRGVVYVQGEKTWVPTSLQSLIDMAK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcacatctgtacggcaaagatgaggacagcgatggggtggagatggagaag
tttgaaatcactgactgggacttggagaacgaattcaaccccaaccggcggaagcattac
cagaccaaagaggagaccacctatggaatctgggcggagcgcgactctgacgacgagagg
cccagctttggtggcaagaagtcccgggactatacagcccctgtgaactttatcagcgcg
ggaatccgtaagcctgcggctgaggagaaagccaatagcgattctgatgatgaaatccca
acaaagagagaagaactgccaaaggagtttgaaccaaagaagctgcggacggggggaaat
tttaagccaacccagaaaacatttgctggaggaataaagtctaatactgattttggttcc
tgggagaggcacaccaaggggattggccagaaactccttcagaagatgggttatgtacaa
ggcagaggcctggggaaaaatgctcaaggtattattgcacctattgaggccaagcagaga
aaaggcaaaggggcggtgggtgcttacggatcggagagaactaagcagtctctgaagcat
tttcctgttgtggattctgaggatgaagaggaacaggaatttcagaaggagctgagtcaa
tggagaaaagaccccggtggaaccaagaagaagcccaagtatgcctacaagacagtggag
gagctgaaagccaaagggaaaggggggaaaatcatcagcgcccctcagagagaaattgct
caagtcaaggtgattgatatgaccggacgggaacagaaggtttaccacagctacagtcag
ttctcacacaagcacaacgtgccaggagacagcacagcaccgggagtgaaggaagagaag
cctcaagggtttgttctgccagaactagagcacaatcttcagctgctgattgacatgacg
gagcaggagatcatccagaacgaccggcagctgcagtatgagaaggacatggtggtgaac
ctgactcatgagctggagaagctgtctgaggtgctgggcagggaggagaaggtcatttac
aacttgagccaggtcctgaagacggtggaggagtgcgaacagaggctgcagcctggctgt
gaaaacccactcacactggacgagtgcgcgcgagttttccagatgctgcaagacaagtac
tacgaggagtacaagatgtctgagaagtccgacctggccgtggctcttgtttatcctttg
gtgaaagaatacttcaaagactggaaccctctaagggaccctacgtatggcattgaagtc
atgacaaagtggaaggatctcctggaagaaggtcatctttcccatagtgcacaggatgca
gccatggacccgtatcacagactcctgtgggagacgtgggttccctttttacgaaacatc
atctcccagtggcaacctagaaactgcccccccatggtggacttcttggacagctgggtc
cacttgcttccggtttggattctagacaatatattagaccaactgattttccccaaactg
cagaaagaggtggagaactggaatccgctgacagacaccgtacccatccactcatggatc
cacccctggctgccgctgatgcagtcccggctagagcccctgttctccccaatcaggaac
aagctggccagcgctctgcagaagtggcatcccagtgactcttctgctaaattaatccta
caaccctggaaggatgtcttcacaccaggctcctgggatgccttcatggtgaaaaacatt
gtgcccaagttaggcatgtgcatggcggaatttgtcattaatcctcatcaacaacacatg
gacgtcttcctgtgggcgatggattgggaggggatgatctccctgtccagcctcgtaggg
gttctggagaaacatttcttctctaagtggttgcaggtgttgtgttcctggctcagcaat
aaccccaactatgaggagatcaccaagtggtacctgggctggaagtcgatgttctcagat
caggtgttggctcatccaggtatcaaagagcgcttcaatgaggccttggacatcatgaac
agagctgtggcttccaatgttggcccatacatgcagcccggcgcccgtgaaagcattgca
tacctgactcagaccgagaggaggaaagacttccagtacgaggccatgcaggagcgacga
gaagcagagagcatcgcacaaagaggcatcggggtcgccacagtgcccatgaacttcaag
gaccttatccaatccaaagcagaggagcacaacattgtcttcatgccgctgatcggaaag
aggcacgagggcaaacaactctacaacttcaaccgtattgtgatttacatagaccggggc
gtggtgtatgtccagggagagaaaacatgggtgcccacctctctgcagagtcttatagac
atggccaagtag
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