Rana temporaria (common frog): 120917131
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Entry
120917131 CDS
T07929
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04136
Autophagy - other
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120917131 (ATG13)
04136 Autophagy - other
120917131 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120917131 (ATG13)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120917131 (ATG13)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120917131 (ATG13)
Atg1 complex
120917131 (ATG13)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120917131 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
120917131
NCBI-ProteinID:
XP_040184129
LinkDB
All DBs
Position
11:24553301..24598848
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AA seq
544 aa
AA seq
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MDSDLSPQDRKDLDKFVKFFALKTVQVIVQARLGDKICTRSSSSPTGSDWFNLAIKDIPE
VTQEAKKALSGQLPAVGRSMCVEISLKTSEGDSMELEVWCLEMNEKCDREIKVSYTVYNR
LSLLLKSLLAVTRVTPAYRLSRKQGHEYVILYRIYFGDVQLLGLKEGFQAVRVGTVGTPI
GTLTLTCAYRTNLAFMSTRQFERTQPIMGIIIDHFVDRPFPSTSHMHPCNYRVSEEQGTV
YPSVEDSQDVCATSFSTSPPSQCVFTFSKARGQTANTVVTDSHRVPTMALAASHQLYSSR
LSYQPTVLGAGSSEPCYPVALAAGGSATLPHQMMVPGKEGGLPNITAQPAHGTQAERDRV
LLTSPPNVTGTTSSSEEADTPSGSNTAGRSGSPNKTPHILFTRKVGAFVDKSSPQVTYAS
TDIPFAVFAPKLAELEENDPMVMCPDSPEEVSPDARSLQSSCSSSEVPQDDFVMVDFRPA
FSKDDLPMDVGTFYREFQNPPQLSSLSIDIAVQSMAEDLDSLPEKLAMHEKNMEEFDAFV
ESLQ
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggactcggacctcagcccacaagaccggaaggacttggacaagtttgtcaaatttttt
gccttgaagactgtccaggtgattgtccaggctcgacttggggacaagatatgtacccgt
tcttcctcctctccaactggttcagattggtttaacttggcaatcaaagacatccctgag
gttacccaggaagccaagaaagccctatctggtcagctgcctgcagttggacgctccatg
tgtgtcgaaatttctttaaagacctcagagggtgattccatggaacttgaagtgtggtgt
ctggaaatgaatgaaaaatgtgaccgggaaataaaggtttcctatactgtgtataaccgg
ctgtcgctgctactgaaatccttgctggcagtcaccagggtaacgccggcctacaggctg
tccaggaagcaggggcatgaatatgtcattctctacaggatatattttggagatgttcag
cttttgggtcttaaagaaggtttccaggcggtgcgagttggaacagtggggactcctata
gggacgcttaccctgacctgtgcctacagaactaatctggctttcatgtctactcggcag
tttgagaggactcagcccatcatggggattattattgatcactttgttgaccgacctttc
cccagcacctcacacatgcatccctgcaactacagggtgtctgaggagcagggcaccgta
tacccgtctgtggaggattcccaggatgtctgcgccacgtccttttctacttctccgcca
tcgcagtgtgtgtttactttcagcaaggcacggggtcagacagctaatactgtggtgaca
gattctcacagggtcccgacaatggcactggccgcctcacaccaactgtacagttctcgc
ctttcctatcagccgactgtccttggagctggatcctctgagccgtgctacccagtggcc
ttggctgctggagggagcgctacccttccacaccagatgatggtaccaggaaaagagggt
ggcttacccaacatcactgcccagcctgcacatggtactcaagctgaacgtgatcgggtt
ctcctgacctcaccacctaatgtaacgggcaccacttccagcagcgaagaagcagacacc
ccatcaggaagcaacactgctggacgaagcggctcaccaaacaagacccctcacatcctc
ttcacccgcaaagtaggggcctttgtggacaagtcctccccgcaggtcacctatgccagc
accgatattccttttgctgtgtttgcacccaagcttgctgaacttgaggagaatgacccc
atggtgatgtgtcctgacagtcccgaggaggtgtcaccagatgctcgaagcttgcagagt
tcctgctccagcagtgaggttcctcaggatgactttgtgatggtggactttcgaccagcc
ttctccaaagatgatctgcccatggatgttgggactttctaccgggagtttcagaacccg
ccgcagctgagtagcctctccatagacatcgctgtgcagtcaatggcagaagatctggat
tccttgccagagaagttggctatgcatgaaaagaacatggaagagtttgatgcttttgtt
gaatctttacagtaa
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integrated database retrieval system
