Rana temporaria (common frog): 120917475
Help
Entry
120917475 CDS
T07929
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120917475 (CTCF)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120917475 (CTCF)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120917475 (CTCF)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120917475 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
LIM
zf-C2H2_15
zf-C2H2_ZN142
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
120917475
NCBI-ProteinID:
XP_040184716
LinkDB
All DBs
Position
11:103457979..103718128
Genome browser
AA seq
733 aa
AA seq
DB search
MEGDMAEAIVEDSETFMKRKETKTYQRRRDGVADDDGCVLVHSQADGSEVPHDVNSNVQM
VMMEHLDPAILQMKTEVMEGVVSQEGEAIVDDTQIITLQVVNMEEQPINLGELQLVQVPV
PVAATSVGELHAAYENEMAKEGLPEGEPMICHTLPLPEGFQVVKVGANGEVETLEQAELQ
PQEESTWQKDPDYAPPVKKIKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSDVNAEK
VVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFR
TVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVS
KLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKM
HILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEQGKKCRYCDTVFHERYALIQ
HQKSHKNEKRFKCDQCEYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKR
YHDPSFVPAAFVCSKCGKTFTRRNTMSRHSDNCTGPDGTEGENGGDGEAMHKKGKRGRKR
KMRSKKEGSTDSDDNAEPDLDDEDEDDEEEDELPVEIEGEHEHNAEQSLTPMPPPAKKRR
GRPPGKANQHKHTATVIEVEDQSTGDIENIIVQVKKETDMEAVGVIAGPPPPPTVEAPNG
DLTPEMILSMMDR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgatatggcagaagccattgttgaagactctgagacattcatgaaaagaaag
gaaacaaagacttatcagaggcggcgagatggtgttgctgatgatgatgggtgtgttcta
gtgcatagccaggcagatggaagtgaagtaccccatgatgttaatagcaatgttcaaatg
gttatgatggagcatcttgatcctgcaattcttcaaatgaaaacagaagtaatggaaggt
gtagtgtctcaggaaggggaagctattgtagatgatacacaaattataactttgcaagtt
gtaaatatggaggaacaaccaataaatctaggagaacttcagcttgtgcaggtacctgtt
cccgttgctgccacatctgttggggaacttcatgcagcttatgaaaatgagatggctaaa
gaaggccttccagaaggagaacctatgatctgtcacacgttgcctcttccagagggtttc
caagttgttaaggttggggcaaatggtgaggtggaaactcttgaacaggctgagcttcag
ccacaagaagaatctacctggcagaaggatccagattatgcaccacctgtcaaaaagatc
aagaaaacaaagaaaagtaaacttcgatatacagaagaaggaaaggatgttgatgtgtct
gtttatgattttgaagaagaacaacaggagggtttgctctcagatgtaaatgctgaaaaa
gtggttggcaacatgaaacctccgaaaccaacaaaaattaaaaagaaaggtgtaaagaaa
accttccagtgtgagctgtgtagctatacttgccccagacggtcaaatcttgatcgccac
atgaagagtcacaccgatgaacgacctcataagtgccacctgtgtggaagagctttcagg
actgttactttgcttagaaaccacctgaatactcacacaggtaccaggccccataaatgc
ccagactgtgatatggcctttgtaaccagtggtgaattagtcagacatcgccgttataaa
catacacacgagaagccatttaagtgttccatgtgtgattatgccagtgttgaggtaagc
aagctgaaaagacatatccgttcacacactggggagcgtccttttcaatgcagcctgtgc
agctatgctagcagggacacctacaaactgaagaggcacatgagaactcattctggtgag
aagccatatgaatgctacatttgtcatgctcggtttacgcagagtggaacaatgaaaatg
catatattgcagaaacatactgagaatgtagccaaatttcactgtcctcattgtgataca
gttattgcaagaaaaagtgatttaggggttcacttaagaaaacagcattcttttattgag
caaggcaagaagtgtcgctactgtgatacagtctttcatgagagatatgccctgattcaa
caccagaagtctcacaaaaatgaaaagcgattcaaatgcgaccagtgtgaatatgcttgc
agacaggagcgtcatatgatcatgcataaacgaacacacactggagagaaaccttatgct
tgtagtcattgcgataaaaccttccgccagaaacagctcctggacatgcacttcaaaaga
tatcatgaccccagctttgttcctgctgcgtttgtttgttccaagtgtggtaaaacattt
acacgtaggaatacaatgtcgagacattcagataattgcactggtcctgatggtactgaa
ggtgaaaatggaggagatggggaggcaatgcacaagaaaggcaaacgtgggcgaaaaagg
aaaatgcgttccaagaaggaaggttcaactgatagtgacgacaatgctgaaccagatctt
gatgacgaggatgaagatgatgaggaagaggatgagcttccagttgagatagaaggtgaa
cacgagcataatgcagaacagtctcttactccaatgcctccacctgcaaaaaaacgtaga
ggaagaccacctggaaaagctaaccaacacaaacacactgcaaccgtaattgaagtggag
gatcaatcaacaggggacattgaaaacatcatagttcaagtgaagaaggagaccgatatg
gaggcagttggtgtgatagcgggtcctccacctcctcccacagtggaagctccaaacggc
gaccttactccagagatgattttgagcatgatggatcggtga
DBGET
integrated database retrieval system
