Rana temporaria (common frog): 120917526
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Entry
120917526 CDS
T07929
Symbol
NPAS4
Name
(RefSeq) neuronal PAS domain-containing protein 4 isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120917526 (NPAS4)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120917526 (NPAS4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
120917526
NCBI-ProteinID:
XP_040184818
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All DBs
Position
11:115836992..115842849
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AA seq
741 aa
AA seq
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MYRSTKGASKARRDQINAEIRNLKDLLPISEGDKVRLSYLHIMSLACIYTRKSVFFSRAQ
QMHELEGLLSNQDIQDFVHNLPGFLLTYTSEGKLIYVSENVTDHLGHSMVDLVAQGDSIY
DIIDPSDHFVMRNQLALPSSLDSERMFRCRFNTSKTARRQSASNKLVLIRGRFQPSPPGT
YWSSNPVFTAFCIPLDPKPRVTNNYFLMDFFESRHAKNLSLLDVSESSELHLGYDKNDMI
CKSWYNIIHPEDLTQLSTQHYKLLNDTSECRAEVVLRLQRKDLQWIWVYSLMLLENTEAP
ITSYNYIISEAEAWCLKQQLTTEESPLSFSVSGPPSYQETLLSPGDLSSPDQVFTPLANT
PTSISQTFEFSEPVPVSPEDPVLCQNTAPIMEDSVATDSQVENQSLFSLYQSTPYDQSFR
SEQAGTTLPKDFTCTPPYTPHQNCSFLFGVPESAPQTSSEQDSTTLNPEVYYSYCSSLYE
KLPPTPDSPGEGGDCTVMTVPEIPGPLFVDLPMLPEGLVTPETSPINQVIFRYSEQEKNE
IDLLVKQIGSLANVFSNVANKELPCSESMILSGHGLAYRSISLPASLPEADSTPNFPRSW
KSIDLSLFLTCQEQPLSTANHTVCSLFKDFPDSPPFAPMGSPCSPLEEDEIQGDLSVSPS
MISNATTDLSPEECNFLEELMSYKTDLEAGASEIQCDRYNDELYQLQLQLQDGFQQGMLL
MIVLKKIDGQLMHANQTQLKA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggtctacgaaaggtgcttcaaaagccagaagggaccagattaatgcagagatt
cgaaacttgaaagatcttcttcctatctctgaaggagacaaagtgcgactatcttatctc
cacattatgtcacttgcctgcatttacaccaggaagtctgttttcttctcaagagctcaa
cagatgcatgagttagaaggtcttctgtccaaccaagacatacaagattttgtccacaac
cttccaggatttctactaacctatacaagtgaaggaaagctgatatacgtgtcagaaaac
gtgactgatcacctaggacattcaatggttgatctggttgctcaaggagacagcatatat
gacataattgacccctcagatcattttgttatgaggaatcagctggctctcccatcatct
cttgatagtgagagaatgttcaggtgtagattcaatacctcaaagacagccagaaggcag
agtgcaagtaacaagctcgtcttgatacgaggaagatttcagccatccccacctggcacc
tactggtcttcaaatcctgtctttacagccttctgcattcctcttgacccaaagcccaga
gtaacaaataactatttcttaatggacttttttgagagccgccatgccaagaatctttcc
ctgctggatgtttcagagagttcagagctgcacttaggctatgacaagaatgatatgatc
tgcaagtcgtggtacaacatcattcatcctgaagacctcacccagctgtctacacaacat
tacaagctattaaatgacacaagtgaatgcagagcagaagtggtgttacgtctgcagaga
aaagatcttcagtggatatgggtgtattctcttatgcttcttgaaaacacagaggctcca
atcacatcctataattatattataagtgaggcagaagcctggtgcctgaaacaacagcta
actacagaggagtctccactttccttctcagtgagtggccctccatcatatcaagagacc
ctcctctccccaggagacctttccagccctgatcaagtgttcactccccttgcgaacaca
cctacaagtattagtcaaacctttgagttttcagagcctgttccagtcagtcctgaagac
cctgttttgtgccagaatactgcaccaattatggaagactctgttgcgactgacagccaa
gtagaaaatcaatctctttttagcctttatcagtcaacaccatatgatcaaagctttaga
agtgaacaagctggaacaacacttcccaaagactttacctgtactcctccatatacccca
catcagaactgtagtttcctatttggggttccagaaagtgctccacaaacatcttctgaa
caggactcaactaccttaaatccagaagtgtactactcctactgcagctccctctatgag
aagctgcccccaactccagatagtcctggggaaggtggagactgcacagttatgacagta
ccagaaatcccaggccctctttttgtggatctgccaatgcttcctgaggggttagtgact
cctgaaacttcaccaattaatcaagtcatcttcaggtattcagagcaagagaagaatgag
atagacttgttggtcaaacagattggctccttagccaatgtgttcagtaatgtggctaat
aaggaactcccgtgctctgagagcatgattttgagtggccatggactggcataccgaagt
atttctctccctgccagtcttccagaagctgattctactcctaactttcctcgatcctgg
aagagcatagacctctctcttttcttgacatgtcaagaacaacctctctctactgctaat
catacagtttgcagccttttcaaagactttcctgactctccaccctttgcacccatgggg
tctccttgcagccccttggaggaggatgaaatacaaggggacctctctgtatctccatcc
atgatttcaaacgcgacaactgatctgtcgccagaagaatgtaacttcttagaggaactg
atgtcctacaaaacagaccttgaggcaggtgcctcagagattcaatgtgaccggtataat
gatgagttgtatcaactccagcttcagctacaagacggcttccagcaaggtatgttacta
atgatagtgctaaagaaaattgatggacaattaatgcatgcaaaccaaacacagttaaaa
gcctaa
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