Rana temporaria (common frog): 120917642
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Entry
120917642 CDS
T07929
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like isoform X1
KO
K04819
5-hydroxytryptamine receptor 3
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120917642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtem04040
]
120917642
Ion channels [BR:
rtem04040
]
Ligand-gated channels
Serotonin (5-HT3)
120917642
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2157
PycTM
Motif
Other DBs
NCBI-GeneID:
120917642
NCBI-ProteinID:
XP_040185022
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All DBs
Position
11:complement(126388994..126447035)
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AA seq
472 aa
AA seq
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MGKFWNYTNSSNKMSPHMLLISLLSSMVLEVWCQSDCSYQKLLKSLNLENASKVRPVRNW
KNASIVNIDLTLYTIVDLDMSTQTATTFVWFYMAWTDEYISWNPGDFCGIKKLFVNSDYF
WKPDLYIYEMTENDDNSPEIPYYILRNNGQIINAMPLRIISTCNLNIYKFPFDIQTCKLS
FGSFMYTVSDIVMWPKSNSSVVNQNAKDVFASKDEWELQSVAVYNTTHKTMGLEYSQVIY
SIYIKRVAVIYVLNLIIPACFLVFLDIASMFIHNYENRLDFKITVVLGFSVMLLILNALL
PNSDSTPMLGTFCCICMAMMILSVIGTIATSYMTEKSTTNSQVPVWVKVLVLKHLARIIL
FKKDFAKEELVTPVTADNNDPENAKKSETNEDVSDQRRALENDSNVKKEVKLLKRILSEI
LRIHRKLILDMQQKDEQTEWSLVAQIVDRLVLILYLSIVTLVFIIMICVWTI
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggggaaattctggaactatactaattcctctaataaaatgtctccacatatgctgctg
atctcgctgctttcttcgatggtcctagaagtctggtgtcagtctgactgtagttaccaa
aagctgctgaaatcattaaacctagaaaatgcttcgaaggtgcgtccagtgaggaattgg
aaaaatgcatccatagtgaacatcgacttgaccttatacaccatcgtagatttggatatg
agcacgcaaactgctacaacctttgtctggttctacatggcatggacagatgaatacatt
agctggaacccaggtgacttttgtggaataaagaaactgtttgttaacagtgattatttc
tggaaaccagacctttacatctacgaaatgacagaaaatgatgacaactctccagaaatt
ccatattatatactgcgtaacaatgggcaaatcattaatgcaatgccactacgcatcatc
agcacctgcaatttgaacatttacaagtttccttttgacatccagacatgcaagctctcc
tttggctcttttatgtacacagtttcagatattgttatgtggccaaaaagcaactcttca
gttgtcaaccaaaatgcaaaagatgtgtttgcctctaaagatgaatgggagctgcagtcg
gtagcagtgtacaacacgacacataagaccatgggcctggaatacagccaagtcatctac
agtatttatataaaaagagttgctgtgatatatgttttaaacctcattatacctgcctgt
ttcttggtattcctggatattgcaagtatgttcatccacaattacgaaaatagacttgat
ttcaagatcaccgttgttctgggattctccgtgatgctgctaattctgaatgccttgctg
cccaattctgatagcactcccatgttaggtactttctgttgtatttgtatggccatgatg
attctcagtgtcattggaacaatagctacttcctacatgacagaaaaatctacaaccaac
tcacaggtccctgtatgggtcaaggtcctggtcttgaagcatctggcacgtattatatta
tttaaaaaagattttgccaaagaagaactggtcacaccagtcacggcagacaataatgat
cctgaaaatgcaaaaaaatctgaaacaaacgaagatgtttcagaccagaggagagcacta
gagaatgattcaaatgttaagaaagaggttaagctgttaaaaagaatcttgtcagaaatt
ttaaggatccatcgtaaactgatacttgatatgcagcagaaggatgaacagacagaatgg
tcactagtagcccagattgtagaccgactagtccttattctgtatcttagcattgtaact
ttggtgtttatcattatgatttgtgtttggaccatttag
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