Rana temporaria (common frog): 120917686
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Entry
120917686 CDS
T07929
Symbol
NUDT21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120917686 (NUDT21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120917686 (NUDT21)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
120917686 (NUDT21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
120917686
NCBI-ProteinID:
XP_040185088
LinkDB
All DBs
Position
11:130491297..130508781
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AA seq
227 aa
AA seq
DB search
MSVIPPNRSSTGWPRGVNQFGNKYLPQTKPLTLERTINLYPLTNYTFGTKEPLYEKDSSV
AARFQRMREEFDKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVEG
LKRLMTEILGRQDGVQQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQ
EKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgatcccgccgaaccgctcgtctacaggctggcccagaggggtgaaccagttc
gggaacaagtacctgcctcagaccaagccactcaccctggagcggaccatcaacctatat
cctcttacaaattacacatttggtacaaaggagcctttatatgagaaggacagctctgtg
gcggcccgcttccagcggatgcgggaagagtttgataagattggaatgagacgcactgtg
gaaggggttctgatcgttcatgaacatcggctaccccatgtcctcctactgcaactggga
accacgttttttaagctgccgggaggtgaactgaatccaggggaagatgaagtggaaggg
ctgaaacgactcatgacagaaattcttggcaggcaggacggggtgcagcaggactgggta
atagatgactgcattggcaattggtggaggccaaactttgaacccccacagtatccatat
attcctgcacacatcacaaaacccaaagaacacaagaagttgtttctggtacagctgcag
gagaaagcactgtttgcagtcccgaaaaactacaaacttgttgccgcccctttatttgaa
ttgtatgacaatgcaccaggctatggccccatcatttccagccttccacagcttctcagt
aggttcaactttatttacaactga
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