Rana temporaria (common frog): 120917755
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Entry
120917755 CDS
T07929
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtem04812
]
120917755 (KATNB1)
Cytoskeleton proteins [BR:
rtem04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120917755 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Katanin_con80
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_HPS5
RMC1_N
Beta-prop_WDR19_1st
WD40_RFWD3
eIF2A
Beta-prop_RIG_1st
Beta-prop_DCAF12
WDR54
Beta-prop_IP5PC_F
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WD_LRWD1
PD40
Motif
Other DBs
NCBI-GeneID:
120917755
NCBI-ProteinID:
XP_040185191
LinkDB
All DBs
Position
11:142347015..142372800
Genome browser
AA seq
655 aa
AA seq
DB search
MAAPGMTKTSWKLQEFVAHASNVSAVALGKSSGRLLATGGEDCRVNLWSVNKPNCIMSLT
GHTSPVESVRFNPSEKLIVAGSQSGSLRIWNMEEAKIQRTLMGHKASICSLDFHPYGEFV
ASGSLDTNIKLWDVRRKGCVFRYKGHTQAVRCLRFSPDGKWLASSSDDNSVKLWDLSAGK
IIAELTEHRGPVQIVEFHPNEYLLASASSDRTLRFWDLEKFQLVGCVEGEATSFRTILFS
GDGGCLFCGGRDALRVYGWEPERCFDTVPVSWGKVSDLSLCNNQLIGVSIAQTNVSSFVV
DLNRVKLIGSEPQGSLPAEIPIRQPAPSASSLRRIYERPSTTCSKPKRASPCSEEDEKES
SAEIQNPEDYKEIFQPKTAISRTPPRESEPFPAPPEDECVPVKESVPPAAEVVTPVAAMN
KNREQLNRPPVASSTPTVCPDPPAAPSTPSHPPVISAARKEPIGLKVADFLPVVKGSSPT
EVGDEEAVGQIRKGHDTMCKVLISRMRNLDTVRAVWSTGDIKTSMDSAVSVNDMSVVVDM
LNIINQKASLWKLDLCLTILPQIDKLLQSKYESYMQTGCITLKLVLQRFLPLITEMLAAP
PSMGVDISREERLTKCKTCYKQLRSLSSLVKSRASQSGRYGSAFRELHLLMSALE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccagggatgacgaaaacttcatggaagctgcaggagtttgttgctcacgcc
agcaatgtgtcagctgtggcattggggaagagttcaggccgtctcttggccacaggtgga
gaggactgccgagttaacctgtggtcagtgaataaaccgaactgcatcatgagtctgact
ggtcacacatccccagtagagagcgtgcggttcaacccgtcggagaagctgattgttgcc
ggatcacagtcgggatctttgcggatttggaatatggaagaagccaaaatacagagaaca
ttaatgggtcacaaggccagcatttgcagtttggattttcatccctatggcgagtttgtt
gcgtccggatctctggacacaaatataaagctctgggatgtgcggaggaaaggttgtgtg
tttcgatataagggtcacacacaagctgtgcgctgcctgcgcttcagcccggatggcaag
tggctggcatcctcttcagacgacaacagtgtaaagctctgggatttgagtgccgggaag
attatagcagagttgacggaacatcgaggacccgtccagattgtggagtttcatcccaat
gagtatttgctggcctcggcgagttcggacaggacgctaaggttctgggatctggagaag
ttccagctggttggctgtgtggaaggagaagcaacttctttcaggacgatcctgttcagt
ggtgatggtggttgtctcttctgtggaggccgcgatgctcttcgagtctatggctgggaa
cctgagcgatgctttgacaccgtccctgtgtcatggggcaaagtctccgacctgtccctc
tgtaacaaccagctgattggtgtctctatcgcccagacgaatgtctcttcctttgtggta
gacctaaaccgtgtaaaactgattggatcagagccacaggggtctcttccagctgagatc
cccatccgtcagccagcaccctctgcgtcctcattgagaagaatctacgagagaccgtct
accacctgcagcaaaccaaagagggcaagtccatgcagtgaggaggatgagaaggagtcc
agtgctgagatccagaatccagaagactataaagaaatcttccaaccaaagactgcaatc
tcacggactcctccacgtgaaagcgagccgttcccagcccccccagaagacgaatgtgtc
cctgtaaaggagtctgtcccgccagcagcagaagtagtcacacctgtcgcggccatgaat
aaaaatcgtgaacagctgaacagaccccctgtggcatcttctacccccacagtgtgccct
gatccccctgctgccccttccacccccagccaccccccggttatctctgctgccagaaag
gagcccatcgggttgaaagtggccgacttccttccagtggtaaagggctcgtctccaaca
gaagttggggatgaggaagccgtgggtcagatccggaaggggcatgacacaatgtgtaag
gtgctgatcagccgaatgcgcaatctggacacggtgagagctgtatggagcaccggggac
atcaagacctctatggactccgctgtgtcagtaaatgacatgtcggtggttgtggacatg
ttaaatatcatcaaccagaaagcgtcgctgtggaaactggatctgtgtttgaccatcctc
ccacagatagacaaactgctacagagcaaatacgaaagctacatgcagactggctgcatt
accctgaagttggtgctgcagaggttcctcccgctgatcacagagatgctggcggctcca
ccctcaatgggtgtggacatttcccgtgaggagagactgacaaagtgtaagacgtgctac
aagcagctccgaagcctctcgtcgttggtgaagagcagagcgtctcagagcggccggtat
ggaagtgccttccgagagctacacctcctaatgtctgcgctggaataa
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