Rana temporaria (common frog): 120917780 Help Entry 120917780         CDS       T07929                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism rtem  Rana temporaria (common frog) Pathway rtem03040   Spliceosome Brite KEGG Orthology (KO) [BR:rtem00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     120917780 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rtem03021]     120917780 (SF3B3)    03041 Spliceosome [BR:rtem03041]     120917780 (SF3B3)    03036 Chromosome and associated proteins [BR:rtem03036]     120917780 (SF3B3) Transcription machinery [BR:rtem03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      120917780 (SF3B3) Spliceosome [BR:rtem03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     120917780 (SF3B3)  Complex B     120917780 (SF3B3)  Complex C    U2 SnRNP specific factors     120917780 (SF3B3) Chromosome and associated proteins [BR:rtem03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      120917780 (SF3B3)     TFTC complex      120917780 (SF3B3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Motif Other DBs NCBI-GeneID:  120917780 NCBI-ProteinID:  XP_040185252 LinkDB All DBs Position 11:complement(143384691..143420003) Genome browser AA seq 1217 aa AA seqDB search MFLYNITLQRATGISFAIHGNFSGTKLQEIVVSRGKIVELLRPDANTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIIILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVASAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQDSLSPIMTCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEYDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG KKIIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPQGEQ RSRFLAVGLIDNTVRIISLDPSDCLQPLSMQALPAQPEALCIVEMGGAERQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESSNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVLNPIQGNTLDLVQLEQNEAAFSVTVCRFSNTG DDWYVLVGVAKDLILNPRSVAGGLVYTYKLINNGEKLEFVHKTPVEEVPAAIAPYQGRVL IGVGKLLRIYDLGKKKLLRKCENKHVPNFIVGIQTIGHRVIVSDVQESLFWVRYKRNENQ LIIFADDTHPRWVTTSSLLDYETVAGADKFGNICVVRLPTNTNDDVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPICGRDHLSYRSYYFPVKNVIDGDLCEQFNSMEPIKQKSVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgttcctgtacaatataacgctgcagagggccactggcatcagctttgccatccatgga aatttctcaggaaccaaactacaagagattgttgtttcccgggggaagattgtggagtta ctccgacccgatgccaacacaggaaaagtccacaccttgctgacggtggaagtgtttggg gtgattcgctctctcatggctttccgcctgactggaggcacgaaggattacattgtggtg ggcagtgactcaggccgtatcatcattctggagtatcacccctccaagaacatgttcgag aagatccaccaagaaaccttcggaaagagcggctgtcgtaggatcgtccccgggcagttc ctggctgtggaccccaagggccgagctgtcatgatcagtgccatcgagaagcagaaactg gtgtacatcctgaacagagatgcagctgcccgtctgaccatctcctccccgctcgaggct cataaggcgaacactctggtgtaccatgtggtgggggtagatgtgggctttgaaaatccc atgtttgcctgtctggagatggactatgaggaagcagataatgacccaactggagaggca gctgctaacacccaacagacactgaccttctatgagctggatctgggcctgaaccacgta gtgcgcaaatatagcgagcctttggaggagcatggcaacttcctgatcacagttcctgga ggatcagatggtcccagtggagtgctcatttgctctgaaaactacattacctacaagaac tttggagaccagccagatattcgctgtcccatcccaagaaggcggaatgatttagacgat ccagagcggggaatgatctttgtctgctccgctacacacaaaaccaaatccatgtttttc ttcctggctcagacagagcagggcgacatctttaaaatcacactggagactgatgaagac atggtcacagaaatccgtctgaaatactttgataccgttccagtggcttcggcaatgtgt gttttaaagaccggttttctctttgtagcttcagaattcgggaaccattatctctaccag attgcccatctgggtgacgatgatgaggaaccggagttctcctcagcgatgcccttagaa gagggagacacctttttcttccagccccgacccctgaagaacctggtgctggtagatgag caggacagtctctctcccatcatgacatgccagattgctgacttggccaatgaagacact cctcagctgtacgtggcctgtggccgaggtccccgctcttctctcagggtcttgagacac ggtcttgaggtgtctgaaatggccgtctcagagctgcccggtaaccccaatgctgtgtgg acagttagacgacacattgaagatgagtacgatgcgtacatcatagtgtccttcgtgaac gccaccctggtactctctatcggtgagactgtagaggaagtgacagactctggatttctt gggacaaccccaactctgtcttgctctctgctaggagaagatgccctagtgcaggtgtat cctgatggaatccgtcatattcgtgcagacaagagagtcaatgagtggaagactccaggg aaaaagatcattgtgaagtgtgcggtcaaccagcgtcaggtggtgatcgctctgactgga ggggagctcgtctactttgagatggacccttcagggcagctaaatgagtacacggagagg aaggaaatgtctgccgatgtggtgtgtatgagtctggccaatgtaccacaaggggagcag cgatcgcgcttcttggctgttggtcttatagataacacagtccggataatttctctggac ccttcggactgtctacagcctctcagtatgcaggccctccctgcccagcccgaggccctc tgtatagtggagatgggaggggcagaaagacaagatgagctgggagaacgaggctccatt ggcttcctctaccttaacataggacttcagaacggagtactgctaagaactgtgttagac ccggtaacaggagacttgtctgataccagaacccggtacttggggtcacggcctgtcaaa cttttcagagtccggatgcaaggtcaggaggcggtgcttgctatgtccagtcgctcctgg ctcagctattcttaccagtcccgctttcacctgacaccgttgtcctatgaaacactggaa tacgcgtctggctttgcgtctgaacaatgtccggagggtattgtagcaatctcaactaac acactgagaattttggcgttggagaagttgggtgcagtgtttaatcaggtggccttccct cttcagtacaccccacgcaagtttgtcatccaccccgaaagtagcaatttgatcattata gaaactgatcacaatgcttacacggaagccaccaaggctcagcgcaagcagcagatggca gaggaaatggtcgaagctgcaggagaggatgaacgagaactggcagcagaaatggcggca gcattcctgaatgagaacttgcctgaatcgatctttggagctcccaaagcaggcaatggg cagtgggcgtcggtcatcagggttttgaatcccatccagggaaacacattggacctggta cagctggagcagaatgaggcggcattcagcgtgaccgtgtgtcggttcagtaacactggg gatgattggtatgtcttggtaggcgtggccaaagatcttatactgaacccgcgttcggtt gctggaggattggtgtatacctacaagttgataaacaatggggagaaactggaatttgta cacaagaccccagtagaggaagttccagccgctattgcaccctaccaggggcgagtcctg ataggggtgggcaaattgctgaggatctatgacctgggaaagaagaagcttctgaggaag tgtgaaaacaagcatgttccaaacttcatcgtggggatccaaactattggacacagagtg atcgtgtcagatgtccaggagagcttgttctgggtgcggtataagcgaaatgagaaccaa ctgatcatatttgctgatgacacacacccccgctgggtgaccacctcttctttgctggac tatgaaacggttgctggggcagacaagtttgggaatatctgtgtggttcgtctccctacc aacacaaatgacgatgtggatgaagatcctactggtaacaaggcactgtgggacagggga cttcttaatggagcttctcagaaggcggaggtgatcatgaactatcatgtaggagagact gtgctatcgctgcaaaagaccaccctgattcctggaggatcagagtccctggtctacact actctgtcaggcgggattggaatccttgtcccgtttacttctcatgaggatcacgacttc ttccagcatgtagagatgcacttgcgttcggagcaccccccaatctgtggccgcgatcac ctcagctatcgatcttattacttccctgtcaagaatgtgattgatggagatctgtgtgag cagttcaactctatggagccgattaaacagaagagtgtagcagaagaattggacaggacg cctcctgaagtctccaagaaacttgaagatattcgaacccgttatgctttttaa

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