Rana temporaria (common frog): 120917879
Help
Entry
120917879 CDS
T07929
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120917879 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120917879 (VPS35)
Membrane trafficking [BR:
rtem04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
120917879 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
Motif
Other DBs
NCBI-GeneID:
120917879
NCBI-ProteinID:
XP_040185397
LinkDB
All DBs
Position
11:151652652..151815201
Genome browser
AA seq
804 aa
AA seq
DB search
MTGRRSSDIMPTTQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGE
LRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVSDLYELVQYAGNIIPRLYLLI
TVGVVYVKSFSQSRKDILKDMVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEELDEEV
TGDIADSMDFVLLNFAEMNKLWVRMQHQGHSRDKEKRERERQELRILVGTNLVRLSQLEG
VNNERYKQIVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQN
VNVKNIIIALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQV
SLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNI
LTVLKLKHFHPLFEYFDYESRKNMSCYVLSSGLEHNTEVGTQEQVDAIMNLVSTLIQDQP
DQPAEDPDPEDFAEEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPL
VFAAYQLAFRYKENSKVDDKWDKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAG
EIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAIVLIIGTFEKMKCFSEENHEPLRTQ
CALAASKLLKKPDQCRAVSTSAHLFWSARNTDKNGEEIHSGKRVMECLKKALKIANQCMD
PSLQVQLFIEILNKYIYFYEKENDVVTIQVLNQLIQKIREDLPNLEACEETEQINKHFHN
TLEHLRVRKDSPESEGPVYEGLVL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgactggaaggagaagctcagatatcatgcccacgacacagtccccccaggatgagcag
gagaagcttctggatgaagctgtccaggccgtgaaggtgcagtcgttccagatgaagaga
tgtctggacaagaacaaactgatggatgctctgaaacacgcctccaacatgctgggagaa
ctccggacctccatgttgtccccaaagagttactacgagctttacatggcgatctccgat
gagctgcattatctggaagtttatttgacggacgagtttgcaaaaggaaggaaagtttcc
gatctctatgagctggtccagtatgccgggaacatcatccccaggctgtacctgctgatc
actgtcggcgttgtctacgtgaaatccttttcccagtcgcggaaagacatcctgaaagac
atggtggagatgtgccgcggagtgcagcatccactgagggggcttttccttcgcaattat
ctcctgcagtgcacccgcaacatcctgcccgatgagggagaagagctagacgaggaagtc
acaggagacatcgcagactcaatggatttcgtccttttaaattttgccgaaatgaacaag
ctgtgggtccgcatgcagcaccagggacacagccgggacaaagagaagcgagagcgcgag
cggcaagaactgcggatcctggtgggaaccaacttggtgcggctcagtcagctggaggga
gtcaacaatgaaagatacaagcaaattgttctgcctgggatactggaacaagtggtgaac
tgcagagatgcacttgcccaggaatacctcatggagtgtatcatacaggtctttcccgat
gaatttcacctccaaactctgaatccttttctccgctcttgtgccgaacttcaccaaaac
gtgaatgtaaaaaacatcatcatcgctttaattgacagactagcgctatttgcgcacaga
gaagatggacccggcatcccagcagatataaaactgtttgacattttctctcagcaagtg
gccacagtcattcagtctcggcaggacatgccgtccgaagatgttgtgtccttgcaagta
tccctcattaatctggctatgaagtgttatcctgaccgggtggattatgtggataaagtg
ttggagactactgttgaaatatttaacaagctgaaccttgaacacattgccaccagcagc
gctgtctcaaaggagctcacccgacttctgaagattccggtggacacgtacaacaatatt
ctgaccgtgctaaagctcaaacacttccatccgctcttcgagtactttgactacgagtcc
agaaagaatatgagttgctatgtgctgagcagtggcttggagcacaacacagaggtcggc
actcaggaacaggtggacgctattatgaacttggtatcgactctgatacaagaccaacca
gaccagccagctgaagacccagacccagaggactttgcagaagagcagagccttgtgggc
cgctttattcacctattgcggtctgatgatcccgatcaacagtacctgatcctgaatacg
gctcggaagcactttggcgctggcgggaaccagcgcatccgctacacgctacccccttta
gtgtttgcagcctatcagctcgctttccgatacaaggagaattccaaagtggatgacaag
tgggataaaaagtgtcagaagatcttctcgtttgcgcaccagaccatcagcgccttaatt
aaagccgaattggccgagctgcccctccgactcttcctccaaggggccctggcagccggg
gaaattggattcgagaaccacgagacggtagcctacgaattcatgtctcaggccttttcc
ctgtatgaggacgagatcagcgactccaaggctcagctggcagccattgtcctcatcatc
ggaacctttgagaagatgaaatgtttcagcgaggagaaccatgaaccactgagaacgcaa
tgcgccctcgccgcctccaaacttttgaagaagccagatcagtgcagagctgtaagcacg
tcggcccacctcttctggtccgcgcgcaacacagacaagaacggcgaggagattcacagc
ggcaaacgtgtcatggagtgtctgaagaaggctctgaagattgctaatcagtgcatggac
ccttcccttcaagtgcagctcttcatagaaattctcaacaaatacatctacttctacgag
aaggaaaacgatgtggtcaccatccaggtcctgaaccagctcatccagaagattcgagaa
gatctcccgaacctggaggcctgcgaagagacagagcagatcaacaaacactttcacaac
accctggagcacctgcgtgtacggaaagactccccggaatcggaagggccggtttatgag
ggtcttgttctttaa
DBGET
integrated database retrieval system
