Rana temporaria (common frog): 120917984
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Entry
120917984 CDS
T07929
Symbol
FANCA
Name
(RefSeq) Fanconi anemia group A protein isoform X1
KO
K10888
fanconi anemia group A protein
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120917984 (FANCA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120917984 (FANCA)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
120917984 (FANCA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_A_N
FANCA_arcN
FANCA_helical
FANCA_CTD
Motif
Other DBs
NCBI-GeneID:
120917984
NCBI-ProteinID:
XP_040185573
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All DBs
Position
11:complement(163134221..163204718)
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AA seq
1422 aa
AA seq
DB search
MSAVTGSTPGGVKRSLAELLAGRASKAARRSEYSRRRGQEAAVYLLSCHQDVNGFLLEAE
DPPGKENSDSKPSPKSSRLPPSFIGSTIRDQASHLGVPDDVLGARSAVSNIQQLCHAPGN
NMEEAWLSQDQRDRLTAFLKTLKVLMKENCFRRSVFLKEIWEQPRPPVLEVVWHLHSMDI
VGIEDILESCTDTGRAGDWFCTGMRALCLHMENSSSDAEFLEQIISDLVAVLIGKAFCQP
ASSVKNSEQSKVSKISLSILDVMLSWLLDGVVEAGSGQSYKPGVERHWLLAYEVSRYRAR
VIPDSLEEFFLHTLSHTLTYKPKLKVSDAIRFQGNWSFVKTCPLLMELFRKVFVLLSAEK
LTSHVQNILDTQEVNWYHILSFFSCLVVCQSEAQHLVRDLLSRLLSQAFETYELEYLITA
FLIARQAALEGPAAFTSYTDWFKGTFGSSSSHQSSSKKSLVFLLKFLSDLVPFEAPQYLK
VHILHSPFVPTKFRSLLMEYITLAKTRLADMKVSIEDMGLYEDLSVGSDKDQTQSQAQQD
VEKAVKIFQNTGKIPASVMEASIFRRPYFTLRFLPALLTPRVLPKNPDSLLLLIDSLKRA
DKIPANMLSSYFNACELEKHRKLEGNEKMDVSMNEEPVARLQAALWELRPYVMDGKRYDE
ISSQVAVISDRLTAVMGSGDPNPVPGTSEALFSRNIEELEPQELTVSDLLLTSFCQCVMA
ASSTNPPDRQGPWPSLYVKMLFGHRRALFALLSRILQLLCHQSPLLKDSHVVGLAAFSVH
LHECRMSLVPPGSDASSLDKFWEVLLNPQCSGSLPVVLRFCTAAVSYACCRLSLLSLETP
SDSIPPLFMRKVQHLLPRLVLETRREGIMEEETDTPVVFGALSLPSAEWKEAARSLWRQT
RVQELFRKDLFQLSFRDWLLWEMSMTPDVDPLSDLERQDYQRWAVSQCFLPESSALDGCG
NHLEKACSAIVDAVLDFSTGSELVPGSAPSEGRTGLGDILSRLQELVCDLLLSRSGKNIQ
VNFLLDVFHGRLSKISDKMETGAQLRRQSQLSMCCRIILGLPSSLLIRPHTDDRGFTSLK
SDDFFQFVSKHLKNMSQRGSALPYDLTAHFFRGLLSSGAQCEDPEEAVNSVLAAAYTQCP
IVMTSAAMWWPQLDAAVGCQWKCLYEADLPQEIERLREMQGAVDRFLSQGSAFPLTGAVW
LSAAFLHFSIRRNKVQQKRLPALLGSLSAKSLQLLDCFLFFSIVDLIPLTLKEGAEHTMA
LEYCIQIIQCLEERGGDWLTTFQLKSEKHKCSLHQSVSEEFLKLLPLAFFSLATSLPGGI
ALSREEFLPVSLEMYTQIFQLFLDGSPLLHPPQNDPQTIFSRGRQFLLSCILKGQHPSAA
FRSRLPQIVIWWEEKDPELAGLLRNVVQSEEEDCMYDEPDLF
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgtgaccggctctaccccgggaggtgtgaagaggagcctggcggagctgctc
gcgggcagagccagcaaggcagccaggagatctgaatacagcaggaggcggggccaggag
gcggcggtgtatttgctgagctgtcaccaggatgtgaatggatttctgctggaggcggaa
gatcctcccggaaaggaaaattcagattcaaaaccttctccgaaatcttcccgacttcca
ccatcctttatcggttccaccataagagaccaggcctcacatctgggcgttcctgatgat
gtcctcggtgcgagatccgctgtctccaatatccaacagctctgccacgcccccgggaac
aacatggaggaggcgtggctcagccaagaccagcgggacagattgacggcttttctgaag
acgctgaaagtgctgatgaaggaaaattgtttccgacgttcggttttcctgaaggagatt
tgggaacagccgcgccctccggtgttagaagtcgtgtggcacttgcacagtatggatata
gtgggaatagaggacatactggaaagttgtacagacacgggccgcgctggtgattggttc
tgtacgggaatgcgggcgctgtgtctgcacatggaaaattcatcttccgatgccgagttt
ctggaacagataatatctgatctggtggccgtgttgattggcaaagctttttgtcagccg
gcttcttctgtgaagaattcagaacagtccaaagtctccaagatctcgctctccatcctg
gatgtgatgctttcatggctccttgatggcgttgtggaagcagggagtggtcagtcatac
aagcccggtgtcgaacgacattggttacttgcctatgaggtgtccaggtacagagcccgg
gtgattccggactctctagaggaattcttcctccacaccctcagtcacacgcttacctat
aaaccgaagctgaaagtttctgacgccattcgatttcaggggaactggagctttgtaaag
acgtgcccgctgctgatggaattgttccgcaaggtgtttgtgctgctgagtgctgagaag
ctgacctcccatgtacagaacatattggacacacaggaggtgaattggtatcatattctc
tcgtttttttcctgcctcgtcgtctgtcagtctgaagctcagcatctggtaagagatctc
ttgagccgtcttctgtctcaggcctttgagacctacgagttggaatatctcatcaccgcc
ttcctcatcgctcgccaggccgctctagagggtcccgccgcgtttacctcctacacagac
tggttcaagggaacattcggctcctccagctcccatcagagcagcagcaagaagtcttta
gtcttcctgttgaagtttctttctgatttggttccatttgaagctccacaatacttaaag
gtccatatcctgcattcgccatttgtacccacgaaattccgctctttgttgatggaatat
atcacactggctaagacccggcttgcggacatgaaggtgtctattgaagacatgggattg
tatgaggacctgtcagtcggatcggataaagatcagacacagtctcaggctcagcaggat
gtagagaaagctgtaaagatatttcagaataccggcaagattccagctagtgtaatggaa
gccagcattttccggaggccgtactttacattgcgcttcctgcctgcgctgctcacgccc
agagtgctgcctaagaatccagattcactcctgttactgatcgactcattaaaacgagcc
gataagattcctgcaaacatgctgagctcctatttcaatgcctgtgaactagagaagcat
cggaagctggaaggcaatgagaagatggatgtgtccatgaatgaggagcccgtggcgagg
ttacaggcggcactatgggagctgagaccatacgtcatggatggcaagcgatatgatgag
atctcatcacaagtggcggtgatttcggataggctgacagcagtgatgggatctggtgat
ccaaaccccgttcctgggacctcggaggcacttttttctcgtaatattgaagaactggaa
ccccaggaactgaccgtatcggacttactcctcacatccttttgtcagtgtgtcatggcg
gcctccagtaccaacccacctgaccgccaaggaccgtggccctccctgtatgtgaagatg
ctgtttggccatcgcagggccctctttgctttgctgagcagaatcttgcagctcttgtgt
catcagagtccgctcctgaaagattcgcatgtagtgggccttgctgctttctcagtccat
ttacatgagtgccggatgtcgctggtgcccccgggttctgatgcctcctcattggacaag
ttctgggaagttctgctaaacccgcaatgttcaggatctcttcctgtagtcctcaggttc
tgtacagcggccgtttcctatgcctgctgcaggctgtcgcttctttctctggagacgccc
tccgattccatccctccgctgttcatgcgcaaggtgcagcaccttttgcccagactggtc
ctggaaacaagaagggaaggtataatggaggaggagactgacaccccggttgtgttcggc
gccctctcccttccttctgcagagtggaaagaagcggcgcggtctctgtggcgtcagact
cgtgtccaggaactttttagaaaggatttatttcagctctcattcagggattggctgctg
tgggagatgtctatgaccccggatgtagatcctctgtctgacctggagagacaggactac
cagcgatgggcggtgagccaatgttttctcccagaatcctcggctcttgatggatgtgga
aaccatttggaaaaggcctgttcagcaatagttgatgccgtcttagattttagtactggg
tctgagcttgtccctggcagtgccccgtctgaaggccgcacgggactcggggacatcctc
agtcgcttacaggagttggtgtgcgatttgttactgagtcgctccgggaagaacatccaa
gtgaatttcctccttgacgtgttccatggaaggttgtcaaagatctccgacaagatggag
accggagcccaactccggagacaaagccaactctccatgtgctgcaggatcatcctggga
ctgccctcctccctcctcatcagaccgcacaccgacgacagaggcttcacctccctgaaa
tctgacgacttctttcaatttgtcagcaagcatttgaaaaacatgagtcagcgaggatct
gctctgccgtacgacctcaccgctcacttcttcagggggttgttgagctccggcgctcag
tgtgaggatcctgaagaagctgtgaattcggttctcgctgccgcttatacacagtgcccc
attgtgatgacgtcagctgcgatgtggtggcctcagctggatgccgccgtcgggtgtcag
tggaaatgtctgtatgaagccgatttgccccaagagattgaacgactgagggagatgcaa
ggcgctgtggacaggttcctctcccagggatcggcttttcccctcaccggcgccgtctgg
ctctctgccgccttcctgcatttctccatccgaaggaacaaagtgcagcagaagagactc
ccggctttacttggcagtttgagcgcaaagtctttgcagctgttggattgcttcctcttt
ttctccatcgtggatctcatccctctgacattgaaggaaggagctgaacacacgatggcg
ctagagtactgtatacaaatcatccagtgcctggaggagaggggaggggactggctgaca
accttccagctcaagtcagaaaaacataagtgttccctccatcagtccgtctctgaagag
ttcctgaagttgctccccttggcgttcttcagtttggcgacgtctcttccggggggaatt
gcgctcagtcgggaggaatttctccccgtttctctggagatgtacactcagatcttccag
ctcttcctggacggcagccctcttctccatcccccgcagaacgatccgcagacgatcttc
agcagggggcgccagtttcttctcagctgcattctgaagggccaacacccaagtgctgcg
ttcaggagtcgcctgccccagattgtgatctggtgggaagagaaggacccggagttggcg
ggattgctcaggaacgtcgtgcagagcgaggaggaggactgtatgtacgatgagcccgat
ctgttctga
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