Rana temporaria (common frog): 120918217
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Entry
120918217 CDS
T07929
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120918217 (SOX18)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120918217 (SOX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
120918217
NCBI-ProteinID:
XP_040185648
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All DBs
Position
12:complement(15082211..15090153)
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AA seq
364 aa
AA seq
DB search
MHRPEPSYCTEETTLGQRGAGSWVPPPPAAPEPGHAPSSPPVPDSPAPSPSPGYGYSHSE
DKPGEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLSVGEKRPFVEE
AERLRVQHLQDHPNYKYRPRRKKQAKKMKRADCSSILRSEGYSGGHRQTSLTHFRELQPL
ASGELETYGLPTPEMSPLDVLEQREPVFFPPHMQEDGEPVSFRSYQPGIDFRQEKALREL
SIPYSPSPTQMGNILRTPPSSAFFYTTQGGPPGCATLGQLSPPPEAHQLDPVEHLNPSEL
WGDVDRNEFDQYLNMSRTQVAIPGYHLSMSKLASARTMACEESSLISALSDASSAMYYSP
CITG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcatagacctgagccaagttactgcacagaggagactactctgggccaacgaggtgcc
ggttcatgggtaccccctccgcccgcagcccctgaacccggtcacgcccccagctccccg
ccagttccggacagcccagcgccgagcccctcgcccggctatggatacagccactcggag
gacaagccgggcgaaccccgaatccggcgccccatgaacgccttcatggtctgggccaaa
gacgagcgaaagagactggcgcagcagaacccagacctgcacaatgccgtactgagcaag
atgctaggtcagtcctggaagaacctgagcgttggggagaagcgcccctttgtggaggaa
gcggagcggctgcgtgtccagcacctccaggaccaccccaactacaagtaccgcccacga
aggaagaagcaggccaagaagatgaagagagcagactgcagctctattctgagaagtgag
ggctactccgggggtcaccgacagaccagtctcacccattttcgagaactgcagccgctg
gcgtctggtgaactggaaacgtatgggcttcccaccccggagatgtctcctttggatgtc
ctggagcagagggaacccgtgttctttccccctcacatgcaggaagatggtgagcccgtg
tcctttcgatcgtaccagcctggtatcgacttcagacaagagaaggcgctcagggagctc
tcaataccgtactctccctcacccacccagatgggcaacattcttaggactccaccgtcc
tctgctttcttctacaccacccagggtgggcctccaggctgcgccaccctcggtcaactt
tccccgccgcccgaagctcatcagttggaccccgtggagcacctgaacccgtccgagctg
tggggggatgttgaccgcaacgagtttgaccagtatttgaatatgagcaggactcaagtg
gccatcccagggtaccacttgtcgatgtccaagctggcgtccgctaggactatggcctgc
gaggaaagcagtctgatatctgctctctccgatgccagttccgccatgtactatagcccc
tgtatcactggctga
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