Rana temporaria (common frog): 120918314
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Entry
120918314 CDS
T07929
Name
(RefSeq) integrin alpha-IIb-like
KO
K06476
integrin alpha 2B
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04510
Focal adhesion
rtem04512
ECM-receptor interaction
rtem04810
Regulation of actin cytoskeleton
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120918314
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120918314
09142 Cell motility
04820 Cytoskeleton in muscle cells
120918314
04810 Regulation of actin cytoskeleton
120918314
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120918314
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120918314
04515 Cell adhesion molecules [BR:
rtem04515
]
120918314
04090 CD molecules [BR:
rtem04090
]
120918314
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120918314
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120918314
Cell adhesion molecules [BR:
rtem04515
]
Integrins
Integrin alpha subunits
120918314
CD molecules [BR:
rtem04090
]
Proteins
120918314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
120918314
NCBI-ProteinID:
XP_040185770
LinkDB
All DBs
Position
12:complement(30986048..31058086)
Genome browser
AA seq
933 aa
AA seq
DB search
MSIDRSDQWLGATVRAWNTSIVACAPFQRYNFVNRNDNSDESGKTPTGACYFTGNLKNFH
EFAPCRDTKTERYHFFEDSAQDNRFCEIGFSADISKKGVLLAGAPGGYYFEGLYATIPLS
NIPQVSDSIIQKYPSLRISREIFVNDSYKGFAVAYGEFTEDGIPEIIVSAPNFENKGLVE
IYSGPITLFRILGNQIAAYFGHSVAVADINGDNLDDLLVGAPLFIERKAGGKLLEVGQVY
VYKQNSLTILDKDPQILSGTYVYGQFGASIASLGDLDQDGYNDVAVGSPFGGQSGAGCVY
IYKGERTGLSTQPSQILEGQPETSFRLGFSLRGGEDIDQNGYPDLIVGAFEADAVYVYRA
QPVLLLQTSMRFLPDSLNPDLTLCELPPLGYFTCFTVSICIQALGKSLPETLPFSMEIQL
DSQKSRFLRRSFFPSLQPNCTITVDVQSNSQLTCTDTKAFLKDDTEFKDKLSPIAVTVNF
SLETEQLLSVLPPLIQGNTFLQQQIHISLGCGEDNICIPDLQLSASWSEEPLIIGIDNYV
QVNFSAMNFGERAYEAELHAWLPSGAHYMHVLGETKEKILCSPRKENRSEHVVCELGNPM
KNGTRIHAWLQLSISYLEDSEGNFSFPMQILSHSSHNFSSPMVWINLNVSVQVSAELHGS
AQPTEVFLPLPKWKPREESSKPEDKGKIVTHVYELYNVGPGTLNGKLVVQSPENYEGDVF
LYPLRVKNDNMQCTMVSDLNYLQLDIMEATKPPVSFSKSDGRRLNKREEPNKDQDVGNTG
SDNSTSSGDGSQYNQSITLNCDNANCWEMECYIQGIAKGQSAVVKLDSILWVSSIMKRPQ
KPFILRSRGYFLMTDSPYRIQPVNLLAQETYAETVIQWVTPDSQKDIPVWWIILGVFGGL
LILALFVFVMWKLGFFMRRRPPTDEGEELTADK
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcattgataggtctgatcaatggcttggagcaactgttagagcttggaacaccagc
attgtggcctgtgctccattccagcgttataactttgtgaatcgcaacgataattctgat
gaatcagggaaaacacccactggggcctgttacttcactggcaacctgaagaacttccat
gaatttgctccttgccgtgacacaaagacagaaagatatcacttctttgaggactcagcg
caagataaccggttctgcgagattggattcagcgcagatataagcaagaagggtgtacta
ctagcaggagcacccggaggctactatttcgaagggctatatgcaacaatacctctctca
aacatcccacaagtgtcagactccataatacagaagtatcccagcttgcgtatatcaaga
gaaatatttgtgaatgactcgtataaaggttttgcagtagcttatggagaatttacagag
gatggaattccagaaatcatcgtcagtgctccaaactttgaaaacaaaggattggttgaa
atatacagtggtccaattacacttttcagaatcctaggaaatcagattgctgcatatttt
ggtcactcggtggctgttgcagacatcaatggtgataaccttgatgatttgctggtggga
gctcctcttttcattgagcgcaaggcaggcggaaagctcctggaagttggacaagtctac
gtttataaacagaacagcctcacaattcttgacaaagaccctcagatccttagcgggaca
tatgtttatgggcagtttggtgcatccattgcttccctaggagacctggatcaagacgga
tacaatgatgtggctgtaggctctccttttggaggacagtctggagcaggctgtgtatac
atatataagggtgaaagaaccggtttgtctacacagccatcacagattctggagggccaa
ccagagacctcattcaggttgggcttttctctgagaggaggggaagacattgatcagaat
ggatatccagatctaattgttggagcatttgaagctgacgcagtctatgtgtacagggcc
cagccagtactccttctccaaacctctatgagatttttaccagactccctgaacccagat
ctgacgctctgtgaactgcctcctttgggttattttacctgtttcaccgtgagcatttgc
atccaggccttggggaaaagtcttccagagacactgcccttttccatggaaatccagctg
gacagtcagaaaagcagatttctgcgcagatccttctttccctcactccaaccaaactgt
acaatcactgtggatgttcaaagcaactcacaactgacctgcactgacaccaaagcgttt
ctaaaggatgacactgagtttaaagacaagctgagccccatagctgtaacagtgaacttt
agcttggagactgaacaattattgagtgttttaccacctctgatacaagggaacaccttc
ctgcaacaacagattcatatttcgttgggttgtggagaggataatatctgtattcctgac
ctacaactgagtgccagctggagtgaagaaccgctcatcattggtattgataattatgta
caagttaactttagtgctatgaattttggagaacgggcctatgaagcagagctgcatgcc
tggcttccatctggggctcattacatgcacgtcttgggagaaactaaggagaagattctg
tgcagcccaagaaaagaaaaccgcagtgagcatgtggtgtgtgagcttgggaatcccatg
aaaaatggaacacggattcatgcatggctacagctgagcatcagttacctggaggacagc
gagggcaacttctcctttcccatgcagatcctaagccatagcagtcataatttcagcagt
ccaatggtctggataaatttgaatgtgtccgtacaagtgtcagcagagctccatgggagt
gcccaaccaactgaggtctttcttccattacctaagtggaaaccccgagaggaatccagt
aaaccggaggataaggggaagatagtgactcatgtctatgagctatacaatgttggacca
ggtacactcaatggcaagttagttgttcaaagcccagaaaattatgagggagacgtcttc
ctgtacccattacgtgtgaagaatgataacatgcaatgtactatggtctccgacctcaat
tatttacagctggatatcatggaggcaactaaaccacctgtaagcttcagcaagtcagat
ggccgtagactaaataaacgggaggaaccaaataaggaccaggatgttggtaacaccgga
agtgacaacagtaccagctcaggagatgggtctcaatacaatcaatccattacactgaac
tgtgacaatgctaactgctgggaaatggaatgctatattcagggcattgctaagggacaa
agcgcagtggtgaaacttgactccatactatgggtgtccagcatcatgaaaagaccccag
aagccgttcattctgcgctcccgaggttactttcttatgactgattccccctacaggatt
caacctgtcaatttgttggctcaagaaacatatgctgagacggtgattcagtgggtgact
ccggacagccagaaagacattcctgtgtggtggataatcctgggagtattcggggggctg
ctaatcttggctttgtttgtatttgtcatgtggaagctcggatttttcatgagaaggcga
ccaccgacagacgagggggaagagctgactgcggacaaataa
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