Rana temporaria (common frog): 120918361
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Entry
120918361 CDS
T07929
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120918361
04121 Ubiquitin system [BR:
rtem04121
]
120918361
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
120918361
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120918361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
zf-C2H2_7th_ZNF462
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
120918361
NCBI-ProteinID:
XP_040185836
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All DBs
Position
12:87492783..87497574
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AA seq
688 aa
AA seq
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MASGGTEELERPASFKSPVWDHFGFPVKYDHEGKRMVDKTMTACRHCGTRKPYDSGNTSS
MATHLKRHHPGVPLTVTGVKTKAVQQPLITAAFKQPLIPQSDRAKAITKAIGVFMGADMR
PYSIVQNEGFKHMLKVLEPRYNIPSRIHFSEKVVPELYEQEKKKVVDELSQASSVALTTD
GWTSRGTESYITITAHFITADWEMRSPVLQTRPLYESHTSAHLAQVLTEAVDEWKLKRPS
TNIPVTTDNAKNQVNAVIEAGLGPQIGCFAHVVNLASQKGISVSRMDRLLGRIRKVVSYF
HRSTTAAHVLKTKQEMLKLPKHKLINDVPTRWNSTYDMLERYLEQQAAIYSALTDKTLKK
IVKDIITLSDDDVRVAEEVLQVLQPLKMVTSLLSTESSPSVSMIMPLKTRILQSMAPGVE
DSTITQDVKTAIREDLQPRYTSPPTLQDYLHRSTALDPRFKSLSHMDPALRQRTYSDLTT
EIVSSLGTKDCDEGQAQAAEPTGANLDSSSPPKKKSAMAELFGETFASKDNKTSADIIKE
EVESYLLAASGITVDGLSLLKVQISAILAFTQKKWAANLLMDHFLDQFSSKPSSYSDRRL
FFMGDLLKIGFSISHNFRGKCVDSKMFFPDRVVRRPLNHFVPKSASMFHLSSEWVLPAFP
AESDADLHKLDIPKVLKAYLGLLLHSES
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggaggaacggaggagcttgaacgccccgcgtcgtttaaatctcctgtatgg
gatcattttggcttccctgtgaaatatgatcatgagggaaagaggatggtagataaaacc
atgacggcgtgtaggcactgtggcacaagaaagccatacgatagtggaaacacgtcaagt
atggccacgcatttgaagcgtcatcaccccggtgttccactgacagtcacaggagtgaaa
acaaaagctgttcagcaaccactcatcaccgcagcatttaaacagcccctcattccacaa
tcggaccgggctaaagccattacaaaagcgatcggcgtgtttatgggtgcagatatgagg
ccatattccattgtgcagaacgagggctttaagcacatgcttaaagtgcttgagccacgt
tacaacatcccgtcgcgcatccacttcagcgaaaaggttgtgccagaactttatgaacag
gagaagaaaaaagtcgtggatgaactatcccaagcatcgtctgttgcgctcacgacagac
gggtggacgtccaggggaacagagagctatataacaataaccgctcacttcatcacggca
gactgggagatgagaagtccggtgctgcagacacgccccctctacgagagtcacacaagc
gctcatcttgcgcaggtgctgacagaagcggtggacgaatggaagctaaagaggcccagt
accaatatcccagtcacaactgacaatgccaaaaaccaagttaatgccgtgattgaggca
ggactgggcccacagatagggtgttttgcacatgtcgtaaatttggcatctcaaaaggga
atctctgtcagtaggatggaccgcctccttgggaggatcaggaaggtggtttcctatttc
caccgaagcacaacagctgcccatgtgcttaaaacaaagcaagaaatgctaaagctgcct
aaacacaagctcataaatgatgtgccaaccaggtggaactccacttatgatatgctggag
cgttatctggagcagcaggcagctatatactctgcactgactgacaagaccctaaagaaa
attgtcaaggacatcattaccctgtctgatgatgatgtgagagtggcagaggaggtcctc
caggtgcttcaacccctcaagatggtaacatctcttctgagcactgaaagttcaccatct
gtatcgatgatcatgcccctaaaaacaaggattctacaatccatggctccaggtgtggaa
gacagcaccatcacacaagatgtcaagactgccattagagaggacctgcagcccagatac
acttcaccccctactctacaggactaccttcacagatctactgccctggatccaaggttc
aagtccctgtctcacatggaccctgccctacgccagaggacatacagtgacctcaccacc
gagattgtgagcagtctgggcactaaagactgtgatgagggtcaagctcaagctgcagag
ccaacaggagcaaacttggactcatcatctcctccaaaaaagaagtcggcgatggcagag
ctttttggagagacctttgccagcaaagacaacaagacttctgctgacatcatcaaagag
gaggtggaatcctatctgctggcagcaagcggcattacagtggatgggctcagtttgctt
aaggtgcaaatttcagccatcttggcttttacccaaaagaaatgggcagcaaacctgctg
atggatcacttcttggatcagttttctagcaaaccatcatcgtattctgacagaagattg
ttctttatgggagatctccttaaaatcggcttttctattagccataatttcaggggaaag
tgtgtcgactccaaaatgttcttcccagacagggttgtgcggagaccattgaatcatttt
gttccaaagagtgcatccatgtttcatctttccagtgaatgggtgcttccagccttccca
gcggaatcagatgctgatctgcacaagttggacattccaaaagtcctcaaagcctatctc
gggctacttctacattcagaatcatga
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