Rana temporaria (common frog): 120918364
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Entry
120918364 CDS
T07929
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04210
Apoptosis
rtem04218
Cellular senescence
rtem04620
Toll-like receptor signaling pathway
rtem04621
NOD-like receptor signaling pathway
rtem04622
RIG-I-like receptor signaling pathway
rtem04623
Cytosolic DNA-sensing pathway
rtem04625
C-type lectin receptor signaling pathway
rtem04920
Adipocytokine signaling pathway
rtem05132
Salmonella infection
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120918364 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120918364 (NFKB1)
04218 Cellular senescence
120918364 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120918364 (NFKB1)
04621 NOD-like receptor signaling pathway
120918364 (NFKB1)
04622 RIG-I-like receptor signaling pathway
120918364 (NFKB1)
04623 Cytosolic DNA-sensing pathway
120918364 (NFKB1)
04625 C-type lectin receptor signaling pathway
120918364 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120918364 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120918364 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
120918364 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120918364 (NFKB1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120918364 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120918364
NCBI-ProteinID:
XP_040185838
LinkDB
All DBs
Position
1:complement(483070633..483246159)
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AA seq
948 aa
AA seq
DB search
MARQMFDLDEPQTLENYFRTNTMGVYDEQILMPHEHHIRPVDGPYLEVTEQPKQRGFRFR
YVCEGPSHGGLPGASSEKNKKSYPQIKIYNYNGHAKIIVQLVTNGKDVRLHAHSLVGRHC
EDGVCSINMGPKDMVIGFPNLGILHVTKKKVIEILERRMIDAFKKGYNAGLLVHPELNYQ
YLGDRTLTEREKEIIRQAAYQQSKDIDLSVVRLMFTAFLPDSNGSFTRRLEPVISVPIYD
SKAPNASNLKIVRMDRTSGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGHIWEGFGDFS
PTDVHRQFAIVFKTPKYRDPNILKPVSVFVQLRRKSDFETSEPKPFLYYPEIKDKEEVLR
KRLKLMPNFSDGFGGSGAGSGGSGSGGGGGGSMYGGAGASGSGGGYNYSTFNYTNNYGGL
NFQVGTMNSNTVLQPQCEGVQEETEALCSKHKQKCLEALITEGDVQTELTLEEICKVPGC
HFLEKAMQVAKYHADSLFDYAVTGDVKMLLAVQRHLAAAQDENGDNVLHLSIIHLHAALV
KIFLEITSGVICEEIINVRNDLHQTPLHLAVITCQSDVVEVILKAGGDPLMLDRNGNSVL
HLACKEGDATTLSILLKHPKLTEIINLPNNDGLSAVHTAVIANSMGCLRQLILVRADVDA
QERKSGRTPLHFAVEQDNISLAGCIILEGDACVDSTTYDGSTPLHIAAGRGSTKLTALLK
AAGADSFIENCEPLYNPEDMDENDIDEGIVPGTKPTDMAINDEVLEILNGKPYTTEFSSA
CPQGDLKDLSEETKQKLYTLLQSEDTDKNWSTLAQNLGLGILNNAFRLSPQPPKTLLDNF
EVSGGTISELLAALKVMSFTEAIEIIEESQPSHSDVSQEDDPSAEISQEQGDCDHHRGPS
DEYTQQYNDSLCDSGVETSFKKLSLSYCELQKAENEHLAPLSELICNN
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacaaatgtttgatttggatgagccacagacgctcgaaaattatttcaggact
aatacgatgggtgtatatgatgaacaaattttgatgccccatgaacatcatattcgacca
gtagatgggccataccttgaagtaactgagcagcctaaacagagagggtttcgcttccga
tatgtgtgtgaaggaccatcccatggaggcctgcctggagcttccagtgagaaaaacaag
aaatcctatccacagattaagatctacaattacaatggccatgctaaaatcattgtccag
ctagtaaccaatggcaaagatgtccggctacatgcccacagcctggtagggaggcattgt
gaagatggagtttgttcaataaatatgggtcctaaagacatggtaattgggttccccaat
ctaggaattcttcatgtcacaaagaaaaaagtgattgagatactggaaaggcgtatgatt
gacgcttttaagaagggatacaacgctggtcttttggttcatcctgagttaaattaccag
tatttgggagataggacactcactgagcgagaaaaagagattattcgtcaagcagcttat
cagcaatcgaaagacatagacctgagcgtggtacgacttatgttcactgctttcctacct
gatagcaatggaagcttcacaagaagattggaacctgttatatcagtccctatctatgat
agcaaagctccaaatgcttctaatttgaaaattgtgagaatggataggacctctggctgt
gtgacgggaggtgaagagatttatcttctatgtgacaaagttcaaaaggatgacattcaa
atacgtttttatgaagaagatgagaatggccatatttgggaaggatttggggacttttca
cctacagatgttcacaggcagtttgccattgtatttaaaactcctaaatacagagatccc
aatattttaaaacctgtttctgtgtttgttcaactccggagaaagtcagattttgagacc
agtgagcccaaaccatttctgtattatccagaaattaaagacaaagaggaagttcttcga
aagcgtctaaaacttatgcctaacttttctgatgggtttggtggaagtggagctggatct
ggaggcagcggcagcggtggaggaggtggtggcagtatgtacggtggtgcaggagcatcc
ggatctggtggtggttataattattccacattcaactacaccaataattatggaggactg
aattttcaagtcggcacaatgaactccaacacagttttacagccccagtgcgaaggagtc
caggaagagactgaagccttgtgctccaagcataaacagaaatgcttggaggctttgatc
acagaaggtgatgtgcaaacagaacttacactagaagaaatctgcaaagtaccaggttgt
cacttcctggagaaggccatgcaagttgctaagtaccatgctgactcccttttcgactat
gctgtgacaggagatgtaaaaatgctactggcagtacagcgccacctagctgcagctcaa
gatgaaaatggggataatgtccttcatctttctattattcaccttcatgctgcactggtt
aagatctttctggaaataacgtctggggtcatatgtgaagagattatcaatgtgcgaaat
gatcttcatcagactcctttgcatttggctgtcatcacttgtcaatctgatgtagttgaa
gttattctgaaagcaggaggagatccattaatgttagatcgtaatgggaattctgtcctg
caccttgcatgtaaggaaggggatgcaaccactcttagcattcttcttaaacaccccaaa
ttaactgagattatcaatcttcccaacaacgacggcttaagcgcagtgcacactgcagtg
attgcaaacagcatgggctgtcttcgacaattaatattagtgagggcagatgtggatgcc
caggagcggaagtcagggagaacccctttgcattttgctgttgaacaggacaacatctct
ctggcgggctgtattattcttgagggagatgcctgtgtagatagtacaacgtatgatggg
agcaccccgcttcatatagctgctggcagaggttctacaaaactcacagctctcttgaaa
gcagcaggtgcggactcattcattgaaaactgtgaaccactatataaccctgaggacatg
gatgagaatgatatagatgaaggcattgttcctggaacaaaaccaacagacatggcaatc
aatgacgaggtgctggaaatactgaatggaaagccatacacaacagagttttcgtccgct
tgcccacaaggagacttgaaagacctcagtgaggagacgaaacagaagctgtataccttg
ttacaaagtgaagacacggacaagaactggtccactttggcacaaaaccttggcctggga
atactgaacaatgctttcaggttaagtcctcagcctcccaaaaccttactggacaatttt
gaggtatctggaggaacgatctccgaacttttagctgccttaaaagtgatgtcattcaca
gaagctattgaaatcattgaagagtcacagccaagccattctgatgtatcccaagaggat
gatccttctgctgaaatctctcaggaacaaggtgattgtgatcatcatagaggaccatct
gatgagtacacgcaacagtataatgacagtttgtgtgacagcggagtagagacatccttc
aaaaagctgagcctttcatattgtgaactgcagaaagcagagaatgaacacttggcccct
ctttctgaactcatctgcaacaactga
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