Rana temporaria (common frog): 120918467
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Entry
120918467 CDS
T07929
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120918467 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120918467 (NUP85)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120918467 (NUP85)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120918467 (NUP85)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120918467 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
CbiJ
Motif
Other DBs
NCBI-GeneID:
120918467
NCBI-ProteinID:
XP_040185996
LinkDB
All DBs
Position
12:complement(104597479..104676111)
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AA seq
663 aa
AA seq
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MEELDVEPAEISIPGFGKQNIGFSWGPGELLLYETPDKSKDAHSIFELKNVRRSIPNLCP
FMYIVSNDEDLYSHVLRKLFNESHSIFVNLQKSEEESSSRTRKAELVQVSKHYRSVLRAC
MLDMLSLRDSTRDVTQNAKYSEQLSILSAMELCWSLCEILFVEAATAGSLLILLLDWVRA
HVSEVDNIVQDVLQSESPPQHDRFWDAITGLVLQGRIDEARQLLAKEAAASLENRSMCRA
LDDLMKKMPVLNSTGSQTLTEFELKWQHWQEVCARHLQEGTFASCQHMETICQVLLGDEE
TLLLKKDLMATWYHFLVSRLLFNYPTVKPTELHAFAQVCLNLFSASESDPEPLDSILLAA
FELDIHQVIKEFSFVSNNWWFVAHLTDLLDHCQLFQTHSLYFGANMREYLLLEYASGLFS
HHSLWQLAVDYLDHCPELGRVYLELLIERIPLTTEKKALKALRICEQRQMTEQVRSICKT
MSMQALRNNRLGSALSWSIRAKDAAFATLISDRFLKDYCERGKFSDLDLIDNLGPAMLLS
DRLTFLGKYREFHRLYNEQEFHEAARLLLSLMTARIAPGYFWFSLLLDSLPLLEQQQVIF
SSEQTYQLMQCLEDKIAVMPGSVTLHEHQLQDGNTETTKIDMLRLALARNLARAIVKEGT
LQA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggacgtggagccggcagagataagcatacctggatttggaaagcaaaac
attggattcagctggggaccaggagaattgcttctatatgaaacgcctgacaagagtaaa
gatgcacacagcattttcgaattaaaaaatgtcagacgctctatcccgaacctgtgtcca
ttcatgtatattgttagtaatgatgaagatctctattctcatgtcctgcgtaaactgttt
aatgagtctcacagcatatttgtgaacctgcagaagagtgaagaagagtcatccagcagg
acacgtaaagcagagcttgtccaagtcagtaaacattatcgctcagttctgcgtgcctgc
atgcttgacatgctctcattgagggattctacacgtgatgtgactcaaaatgccaaatac
tctgagcagctctctatactgtctgccatggagctttgctggagcctgtgtgaaatactc
tttgttgaagctgctacagctggatccctcttgatactgttgctggattgggtacgagcc
catgtgtctgaagtagacaatatagttcaagatgtgctccaaagcgaaagtcccccacag
catgacaggttttgggatgcgattactggacttgttctgcaaggtcgtatagatgaagct
cgacagttgctagccaaagaagctgctgcttccttggaaaataggagcatgtgcagagcg
ctggatgatcttatgaagaaaatgccagttcttaattcaacgggttcgcagacgctgaca
gagtttgaactaaagtggcagcattggcaagaggtatgtgcacgccatctgcaggaggga
acctttgcatcttgtcaacatatggaaaccatatgtcaggtgttactgggtgatgaggaa
acgttgttactgaagaaggacctcatggctacgtggtatcattttctcgtttctcgattg
ctttttaattacccaacggtgaaaccgacagaattgcatgcatttgctcaggtctgttta
aaccttttttcggcaagtgaaagtgatccagaaccactagacagtatcctactggctgcg
tttgagctagacattcatcaagtcatcaaggaatttagctttgtgtccaacaattggtgg
tttgtggcccatctgactgacctgctggatcattgccaacttttccagacccacagttta
tattttggggccaacatgagagaataccttctgcttgagtatgcgtctggtcttttctcg
caccatagcctgtggcagctggcggttgattacttggatcattgtccagaacttggtaga
gtttaccttgaacttctcatagagcggattccactgactactgaaaagaaggcgttgaag
gcattgagaatttgtgagcagaggcagatgactgaacaagttcgaagtatctgtaagaca
atgtcaatgcaagctttgcgcaacaatcgtttgggttcagctttgtcctggagtattcga
gcgaaagatgcggcttttgcaacactcatatcggaccggttcttgaaggattactgtgaa
cgagggaaattttcagatttggacctaattgacaatcttggcccagcaatgctactgagc
gatcgtcttacattccttgggaaatacagagagtttcaccggttgtacaatgagcaggag
ttccatgaagcagctcgcctgcttctttcgctcatgactgcgcgcattgctccaggttac
ttttggttttccttattgttggattcgctaccccttcttgaacagcagcaggtgatattc
tcctcggagcagacatatcaattaatgcagtgccttgaggacaagatagctgtgatgcca
ggatcagttactttacatgagcaccaacttcaggatgggaatactgaaaccactaaaatt
gacatgctgcgtctggcacttgctcgaaatctagcacgtgccattgtaaaagaaggaaca
cttcaagcctag
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