Rana temporaria (common frog): 120918619
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Entry
120918619 CDS
T07929
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120918619 (CHD6)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120918619 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
CHDCT2
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
120918619
NCBI-ProteinID:
XP_040186226
LinkDB
All DBs
Position
12:complement(115708455..115877521)
Genome browser
AA seq
2661 aa
AA seq
DB search
MIMKIQKQEQQLPNLKALSYSPMSSASISCERQVLAPFSESSLEDFHPVTLLDTPSRLLA
EDELFPEQETCELGSPNNLNGMEDSGGGGTGVKKKRKKKEQGEEKETKPKKKKEPKKVKE
PKKAKEPKEAKESKQPKSPKEPKSPKEPKSPKEPKKPRKPKEPKAPKEKKTNSETVVKTK
SKKTSKEQGPTPVEKKKKGKRKAESYEEGMESDLSILNSACPSTEESTESLDSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRASALSASTLAWQAEEPPEDDANIIEKILSS
KIVQKEITSGGLPMEVEEFYVKYRNFSYLHCKWATLEDLEKDPRIQQKIKRFRTKQAQMK
HIFTEPDEDMFNPDYVEVDRVLEVAHTKDSDTGEEVTHYLVKWCSLSYEESTWELEEDVD
PGKVKEFEVLQVLPEHIVTERPPSDLWQKLECSRTYKNNNQLREYQLEGMNWLLFNWYNR
KNCILADEMGLGKTIQSITFLSEICFMGIRGPFLIIAPLSTITNWEREFRTWTELNAVVY
HGSQISRQMIHQYEMCYRDTQGVPVPTIFKFHVVITTFEMILTDCPELKKIRWSCVIIDE
AHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPNQFPSESTFLEEF
GDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF
TFLAKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHNPDASDFQLQAMI
QAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQ
AAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQS
KAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGNTNGVQPLSKIEVEDLLRKG
AYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDD
PNFWQKWAKIAELDTDAKNEKDSLVIDRPRVRKQTKHYNSFEDDELMEFSELESDTEERP
TRSRRLNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTLGRFKWHLNEKDMEMICRALLV
YCVKHYKGDDKIKSFIWDLITPIKDGGSNQALQNHSGLSAPVPRGRKGKKIKNPMLLPEI
KNADWLASCNPEIVLHDESYKKHLKQHCNKVLLRVRMLYYLKAEVLGDAATKALEGENAR
DLDVMLPDIDYVEIPVDWWDSEADKSLLLGVFKHGYERYCAMRADPSLCFLEKVGKPDES
ALSADGVHDVSHDLVERSGTEKEDNNEDKQEGQQEVLQENTSVKENTEEQVDEESSTAQD
SPESDKLLWPVASALTARLRRLITVYQRCNRKELSRPEILAPTNHNYWLQDEMVRRVEMD
PIMKEMQKRWTRREQADFYRTVSSFGVIYDADKKCFDWTQFRALSRLDKKTDESLEKYFH
SFVAMCRNVCRLPLRKDDGSADPSIYLDPITEERAARTLYRIELLRKVREQVLRHPQLNE
RLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLSRTDYYIMNDTQLSFLDAYRNYSQHKR
SGSENMCCHYQMGSKMYEPATCLLERTFDSTKVETENEIKIEAVEEPIARPDCSPKNGGN
FSSRVGEMMTNNHDECSLPDALICMMYDKKSCNSSLLQASTSEQSSLAQERFLGLEEKSE
PNDYSLNKTKVDNLSQSEEPVSRDCFLGTSEQEDPLEVQESNLGKPFNSSENHISLSVEE
DEQPSIGQRGTKTLNDNHFCTDLGQTAEQSLGLDLEFLDKTFVHSTLSPSLNEDKDCILR
DGPDSPNCSHLPVEEKEEWGAELQEIKDDPIVKWQKELDDMKDLALEETSEEHKVKDLSV
HGEVLELDQDCVVHPLDSKDSLELGHKTSQMLSGLLKQSTEELRAKVSDEKLAEGSPSTS
DGKLKMEDCEVKKENVEEECTCKDLLDKYPDEEVKSCSISTAREVTQDFHDGRAPTIAQL
LQEKTLYSFSEWPKDRVIINRIDNICHSVLKGKWPSSSQQFEAQCMVPSVLHSNPPVRSN
YSTSEAQNYSNGSPSSHAHKEAITAPTFCNDERKPRKAFEFDGERSDIKPRVSQHLNSLH
GRSSAAINGWRETAMELCREQSTASSSAYSINSSTPKVAGIGGLQSSLGMDLSGILQAGL
IHPVTGQIVNGSLRREESALRRRRGRRKNVEGMDLVFLKDRGMHAGIVGMREDSSQLGST
HTEGPSPIQSVTTASKMHSEKVMPNKSLLEWLRQQSDCTIDIPTYGGSLSDKPKPRRQRY
KEPVKLDFSMLAGEERTSAVNKDAGRRGFLPEAKFGRVLSEPLLHDPGPRRRGRRPRTDL
LKPPGSDSSSSGLNPLFMNGLIAGMDIVGLQNMRNMQGIPLTGLLGFPTGFTAVSANEDV
KNTLSMLPMMLPGMTGMHQMFGVGGIINSPISSSVPTSLGSTIKGGVTSTENPAEDKDTS
QESPNDAAPVEKTSGAAFKEQTEPTVTTSSPVAFNPFLIPGMSPSLLYPSMFLSPGIGMA
IPGVQSNRTSEAGVHDTQRRRKKKVKGDPPTSEPESVSLTEATDQEQPSPSGQNFVDISE
TPASEREEDDSGLRETPDNTI
NT seq
7986 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaaacaagaacagcagctgcccaacctgaaagcacttagctat
tcaccaatgtccagtgcctctatatcctgcgaacgccaagtacttgccccgttctccgaa
tcaagtcttgaagatttccaccctgtaacacttttggacactccttcccgactcttggct
gaggatgaactcttccctgagcaggaaacttgtgagcttggctcaccaaacaatcttaac
gggatggaggacagtggagggggtgggactggcgtaaagaaaaaacggaaaaaaaaggaa
cagggggaggaaaaggaaactaaaccaaagaaaaagaaggagcccaagaaagttaaagag
cctaaaaaagcaaaagagcccaaagaggccaaggaatccaaacaacccaagagccctaag
gaacccaagagccctaaggaacccaagagccctaaggaacccaagaagccaagaaaaccc
aaggagccgaaagctcctaaagaaaagaaaacaaattcagaaacggttgttaaaaccaaa
tctaagaaaacaagcaaagaacagggaccaacaccagtagagaagaagaagaaagggaag
aggaaagcagaatcctatgaagaaggcatggagagtgacctgtctatactgaactcggca
tgtccgagcacagaggagtctacagagtcgcttgacagccagaaacggaggtctggtcgg
caggtgaaaagacgaaaatacaatgaagatcttgattttaaagtggtagatgatgatggg
gaaactattgctgttttgggagccgggagagcctctgcattgtctgcatccacgctggca
tggcaggctgaggagcctcctgaagacgatgccaatataatagaaaagatcttatcttca
aagattgttcaaaaagagatcacttctggaggattgccaatggaagtggaggaattttat
gtcaagtatagaaatttctcatatcttcactgtaaatgggcaactcttgaagatcttgag
aaagatccgaggatccagcagaaaatcaagcggtttcgtaccaaacaagctcagatgaaa
catatattcactgagccagatgaagatatgtttaatccagactatgtagaggtggacaga
gtactagaggtggctcatacaaaggactctgacacaggagaggaggtgacacattacctg
gtgaagtggtgctcgctgtcctatgaagaaagcacttgggagctggaggaagatgttgat
cctggcaaagtcaaggaatttgaagtgcttcaagttctgcctgagcacattgttacagag
cggccaccttctgatttgtggcagaagctggagtgttctcgcacgtataaaaataacaac
cagctaagggaataccagttagagggcatgaactggctgctcttcaattggtacaacaga
aaaaactgtatcctggcagacgagatgggtcttggtaaaaccatccagtcgatcactttt
ctctctgagatttgcttcatgggaattcgcgggccttttctgatcattgctccactgtcc
acgatcaccaactgggagcgagagtttcgaacatggacagagttgaatgctgtggtttac
catggaagtcagatcagtcggcagatgatccaccagtatgagatgtgctacagggatacc
caaggagtgccagttccgacaatcttcaagttccacgtggtcatcacaacttttgaaatg
attctgactgactgtccagagctgaaaaaaatcaggtggagttgtgttatcattgacgag
gcccatcggctgaagaacaggaactgcaagctccttgaaggcctgaaacttatggcactg
gaacacaaggtacttcttactggaacacctctacagaactcggtagaggagttgttcagc
ctgctcaacttcttggaaccaaatcagtttccttctgaaagcacttttttggaggagttt
ggagatcttaaaacggaagaacaagtaaagaagctgcagtcgattctgaagccgatgatg
ttgagaaggttaaaggatgatgtggaaaagaacctggcacctaagcaagaaaccatcatt
gaggtggaactgaccaatattcagaagaaatattaccgagccattctggagaagaacttt
acattcctggccaaaggggccaaccagcataacatgcccaatctaattaacaccatgatg
gagctccgaaagtgctgcaatcatccatacctcatcaacggtgctgaggaaaagatttta
gaagacttccgtaagacgcacaatcccgatgcctcggatttccagctccaagcaatgata
caggcagcaggaaaacttgtgctgattgataagctattgccgaaactcattgctggaggg
cacaaagttctcatcttttcccaaatggttcgctgcttggacatcctggaggactaccta
atccagagaagatacacttatgagcgaatagatggaagggtacgaggtaacctccggcag
gcagccattgacagattctgtaaaccagactctgatcgttttgtattcctgctctgcact
cgggctggaggtttgggaatcaacttgacagctgccgacacttgtattatctttgattct
gattggaaccctcagaatgatctgcaggcccaagcacgctgtcatcgtattggtcagagc
aaggcggtgaaagtgtaccgtctgataacgaggaactcttacgagcgagagatgttcgac
aaggcaagcttaaagctaggattggataaggcagttctacaggacatcaacagaaaagga
aacactaatggggtgcaaccgttgtccaaaattgaggttgaggatctcctccggaaggga
gcatatggtgctctgatggatgaagaggatgaaggttccaaattctgtgaagaggacatt
gatcagattctgcagcgcagaacacaaaccatcactatccagtctgaagggaaaggctca
acatttgccaaggccagttttgtgtcctctggtaacagaacagacatctctctggatgac
cccaacttctggcagaaatgggccaagattgcggagctggacacagatgccaagaatgaa
aaggatagtttggtcattgaccgccctcgtgtgaggaagcaaaccaaacattacaactcc
tttgaggacgacgagctgatggaattctcagagcttgagagtgacacagaggagcgacca
acaaggtcacggcgactgaatgagaaaacgcgtcgttatctacgggcagaatgcttcagg
gtggaaaagaacctgctcatatttggctggggacgctggaaggacatcctgactctggga
cgcttcaagtggcacttaaatgagaaagacatggagatgatctgcagggctttgctggtt
tattgtgtgaaacattacaaaggagatgacaagatcaaaagcttcatttgggaccttatc
actcccataaaagatggtggaagcaaccaggctctgcagaaccactcaggtttgtcagcc
cctgtcccacgtggaaggaaagggaagaaaattaagaatccaatgttattgccagagatc
aagaatgctgattggctggcaagctgtaaccctgagattgtcctgcatgacgagagctac
aagaagcacctcaaacaacactgtaacaaggtccttcttcgagtacgaatgttgtactac
ctgaaggcagaagttcttggggatgcagctaccaaagctctggaaggtgaaaatgcaagg
gacctggatgtaatgttacctgatatagactatgtagaaatacctgtggactggtgggat
tctgaagctgacaaatcactactgcttggtgtttttaagcatgggtatgagcgttactgt
gccatgagagcagatccatccctctgcttcttggagaaggtggggaagccggatgagagt
gccttgtctgctgatggagttcacgatgtcagtcatgacctagtagaaagatctggcaca
gagaaagaagacaataatgaggacaaacaggagggacagcaggaggttttgcaggaaaac
acaagtgtcaaggagaacacagaggagcaggtggacgaggaaagcagtacagcccaggat
agccctgaatcagacaaactcttgtggcccgtcgcctcagccttgactgcaagactgcga
agactaataactgtataccagcgctgcaaccgcaaggagttatctcggccagagattttg
gctcccaccaaccacaactattggctgcaagatgagatggtcaggagggtagagatggac
cctatcatgaaagaaatgcagaaaaggtggactagaagggagcaggctgacttctatcga
acagtgtcctcttttggagtcatctatgacgcagataagaagtgtttcgattggacacag
ttccgtgcactgtcccgtcttgataaaaagacagacgagagcttagaaaaatacttccac
agctttgtggccatgtgccgaaatgtgtgccgactccccctcagaaaagatgatggttct
gctgatccctccatttacttagacccaataacggaagaacgtgcagcaagaactttgtat
cgaatagaacttcttcgcaaagttcgagaacaggttctgaggcacccacagcttaatgag
cggcttaaactatgtaggcctagcctttaccttcctgtgtggtgggaatgtggtaaacac
gatagagaccttctaataggcacggccaagcatgggctaagccgtacggattactacatc
atgaatgatactcagctgtcttttttggatgcctataggaattactctcagcataagaga
agcggcagcgaaaatatgtgttgccattaccagatgggctccaagatgtatgaacctgct
acttgcctcttggagaggacatttgattctacaaaggtggagactgaaaatgagattaaa
attgaagctgtggaagagcccatcgcaaggcctgactgcagtcctaaaaatggtggcaat
ttctcctcccgagttggcgagatgatgaccaacaatcacgatgagtgctctttgcctgat
gcgctcatctgcatgatgtatgacaagaaatcttgcaacagctctcttcttcaagccagc
actagtgaacagagctcccttgctcaggaacgttttctaggcttagaggaaaagtctgag
ccaaatgactactctctcaataagaccaaggtggacaacctatcacaaagtgaggagcct
gtttctagagactgtttcctgggaaccagtgaacaggaggatcctttggaagtccaagaa
agcaacctgggcaaaccatttaacagcagcgaaaaccatatcagcttgtcggtagaggag
gatgaacagccaagtattgggcagaggggcacaaaaactttaaatgataatcatttttgt
actgatctcggccaaactgctgagcagtccctgggcctggatctggagtttttggacaaa
acatttgtacattcaactctgagccccagtctcaatgaggacaaagattgcatattgaga
gacggtcccgacagtccaaactgcagccatcttccagtcgaagaaaaagaggaatgggga
gccgagctgcaagaaattaaagatgaccccattgtaaaatggcagaaggaactagatgac
atgaaggatcttgctttggaagaaacttctgaagagcacaaagtaaaggacttgagtgtt
catggtgaggtcttggagctagaccaggattgtgttgttcatcccttggacagcaaagac
tccttggagttgggacacaaaacgagtcaaatgctttctggcctcctaaagcaaagcact
gaggagttgagagctaaagtctcagatgaaaaactggctgagggatccccatctacttct
gatggaaaattaaaaatggaagactgtgaagttaagaaggagaatgtggaggaggaatgc
acttgtaaagaccttcttgataaatatcctgatgaagaggtaaaaagctgctcgatatcc
actgcgagggaagtgacgcaggacttccatgatggccgagcacctaccattgctcagctt
ctgcaggaaaaaaccctatattccttctccgagtggccaaaggatcgagtgattattaac
cgaatagacaacatttgccactcggttctgaaggggaagtggccatcctcgagccagcag
tttgaagcacagtgcatggtaccgtcggtgttacacagcaatccaccagtaaggagcaac
tacagcacttcagaagcacaaaattacagcaatggctcccccagctcacatgcacacaag
gaagcgataactgctccaacattttgcaacgatgaacgtaagcctcgaaaagcatttgag
tttgacggtgagcggtcagacattaagccccgggtttcccagcatctcaattcactacat
ggaaggagctccgcagctattaatggctggagagagactgccatggagctttgcagagaa
caatctacagccagcagctcagcctactccatcaacagcagtacgcccaaggtggcagga
ataggcggtctgcagagctccctgggaatggacttgtcgggaatcctgcaggctggtctc
atccaccctgtgacagggcagattgtaaatggaagcctacgcagagaggaatctgccctc
cggagaagacgaggaaggagaaaaaatgttgaagggatggaccttgtgttcctaaaggac
aggggaatgcacgcaggaattgtgggaatgcgggaagattccagccagctgggctctacg
cacacagaaggcccatctcccatacagtctgtcactacagcttctaaaatgcactccgag
aaagtgatgcccaacaagagcctcctggaatggctgcgccagcagtcagactgcacaata
gacataccaacctatggaggtagtttatcagataaacctaagccaaggcgtcagcggtac
aaggaaccggtgaaactggatttcagcatgctagctggtgaagagaggacctcggctgta
aataaagatgcaggacgacggggatttctcccggaggcaaagtttggtagagtattgtct
gaacccctacttcatgaccctggccccaggagaagaggaaggaggcctcgaacagatcta
ctaaaaccccccggatccgattcttcttcatcaggcttgaatcctcttttcatgaacggc
ctaatagctggaatggatatagtgggattgcagaacatgaggaatatgcagggtattcct
ttaacaggactcttaggctttcctacaggattcacagctgtatctgccaatgaggatgta
aagaacacgttgagtatgttgcccatgatgctcccaggtatgactggcatgcatcaaatg
tttggcgttggtggaattatcaactctcccatctcttcttctgtgccaacgtctttagga
agcacaataaaaggtggcgtcacctcgacagagaatcctgccgaggacaaggacacatcc
caggagagtccaaacgatgccgcgcctgtggagaaaacgtcaggtgctgcttttaaagag
cagacagaacccacagtgactaccagtagccctgtagcttttaacccattccttatccct
ggcatgtccccaagtctgctttacccttccatgtttctgtcgccgggcatcggcatggca
ataccaggggttcagtctaaccgcacatcagaggcaggtgtccacgacacacaacggagg
aggaagaagaaggttaagggagaccccccgacttctgaacctgaatcggtgtccttaact
gaagccacagaccaggagcagccctctcccagtggtcagaactttgtagatataagcgag
accccagcatctgagagagaagaggacgattctggtttaagagagactccggacaatacc
atttag
DBGET
integrated database retrieval system
