Rana temporaria (common frog): 120918813
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Entry
120918813 CDS
T07929
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120918813 (RBM39)
Spliceosome [BR:
rtem03041
]
Common components
Common spliceosomal components
General mRNP proteins
120918813 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
120918813
NCBI-ProteinID:
XP_040186555
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All DBs
Position
12:complement(127596109..127627276)
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AA seq
557 aa
AA seq
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MADDIDIEAMLEAPYRKDENKQNSANGHEERSKKKKKSKSRSRSREPKRSRSKTRKHSKE
REKKRSGSKEKKRSRSKERKRSRSKSRDRKFRGRYRSPYSGPKFGAPMRGKMGVPHGVKL
RRRSKSRSPQKREKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD
VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAALANN
LQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDS
ECAKKALEQLNGFELAGRPMKVGHVTERTDASNASSFLDSDELERTGIDLGTTGRLQLMA
RLAEGTGLQIPPAAQQALQMSGSLAFGAVQDLQTRITQQSEVPKPSPDRTEPWGQAAHAP
FALAAASAAAIQMTSATLPIPPAATQPLATQCFQLSNMFNPQTEDEQGWDTEIKDDVIEE
CNKHGGVVHIYVDKSSPQGNVYVKCPTIASAIAAVNALHGRWFAGKMITAAYVPLPTYHS
LFPDSMTSTQLLFPVRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacattgatatagaagcgatgctggaagctccttacaggaaggacgagaac
aaacagaacagtgccaatggacatgaggagcgtagcaagaagaaaaagaagagcaaaagt
aggagccgcagtcgcgagccgaaacgtagccgtagcaagactcgtaagcatagtaaggag
cgagagaaaaaaagaagcggaagcaaagagaagaaacgtagccgcagtaaggaacgaaaa
aggagccgttcaaaaagtagagatcgtaaattcagaggtcgatacagaagcccatactct
ggaccaaaatttggagcccccatgcgtggaaagatgggagtaccacatggtgtgaagcta
aggcgtaggtcaaagagcagaagtcctcaaaaaagagagaaaagccctgtaagagaacca
atagataatcttacaccggaggagagggatgcacgtactgtcttttgcatgcagctagcg
gccagaatccggccaagagatcttgaagagtttttctccactgtaggaaaggtccgtgat
gtacgaatgatttcagatagaaattccaggcgctctaagggcattgcttatgtggagttt
gttgatgtcagttcagtacctttagccattggcttaacaggacagagagtcttgggtgtt
cctattatagttcaagcttctcaggccgaaaagaacagagctgccgctttggccaataat
ttacagaaaggcactgcaggaccaatgaggctgtatgttggatctttgcactttaacata
acagaagacatgctacgtggaatatttgaaccatttggcagaatcgaaagcatccaactt
atgatggacagcgaaactggccgctccaagggatatggatttattactttctcagattcc
gaatgtgccaaaaaagctctagagcagttaaacggctttgagcttgctgggcgccctatg
aaggtcggtcatgtgacggagcgtactgatgcttcaaatgccagttcatttttggatagt
gatgagcttgagagaactggaatagaccttggaaccactggtagacttcagcttatggca
aggctggcagaaggtacgggtctacagattcccccagctgctcagcaagctttacagatg
agtgggtcattagcttttggagctgtacaagatctccagacaagaattacacaacaaagt
gaagtccccaaaccatctcctgatagaacagaaccttgggggcaagctgcacatgctcca
tttgctcttgctgctgcttctgctgctgcaatccagatgacttcagccacattacctata
ccaccagcagcaactcagccactcgctacccagtgcttccagttgtcgaatatgtttaac
cctcagacggaagatgagcaaggctgggacacagagataaaagatgatgtcattgaagaa
tgcaacaaacatggaggagttgtacacatttatgtagataaaagttcaccacagggaaat
gtttatgtgaaatgtccaactatagcatctgcaatagctgcagttaatgcactacatggg
aggtggtttgctggtaagatgataacagctgcgtacgtcccacttccaacttaccacagc
ctcttcccagactccatgacctcgactcagcttctgtttcctgttcgtcgatga
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