Rana temporaria (common frog): 120918876
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Entry
120918876 CDS
T07929
Symbol
CHAD
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04510
Focal adhesion
rtem04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120918876 (CHAD)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120918876 (CHAD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtem00535
]
120918876 (CHAD)
Proteoglycans [BR:
rtem00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
120918876 (CHAD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_9
LRR_14
LRRCT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
120918876
NCBI-ProteinID:
XP_040186664
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Position
12:131907681..131919586
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AA seq
360 aa
AA seq
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MEHLRVLLLLAILAVACHSLAACPANCHCHGGELQHVICYSSGLTKIPKVSEQTRLVNLQ
KNSFPVLAPNSFKEMKGLVSLHMQYCGIREVATGAFRGLKRLVYLYLSHNDISAIGAGAF
DELPELTYLYMDHNKIIDIPKGLLSPLANLFIFQLSNNKVRELKAGTFAGAKDLRWLYLS
DNELTTLQPGSLDEVENLAIFHLDGNQLSTYPLAAVSKLRVVEDYKISRNPIKVIPDFAF
QSFGRYMETLSMDQMGIEKFSEKAFVGVTALKSLNIEGNKLSQLPANAPFSSLQNLTLAN
NPWHCSCQLAAVRRWIDGSRSRPDATCASPAQYRGQQLRDTGAFRGCKQPVKKSKKGERH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggaacacctccgcgttcttctcctgctcgccatcctagctgtcgcgtgccacagcctc
gcggcatgccccgcgaactgccactgccacgggggagaactgcagcatgttatctgctac
agctcggggttgactaagatccccaaagtgtccgagcaaactcgcctggttaacctgcaa
aagaactccttccctgtgctggctcccaactccttcaaggaaatgaaaggtttggtgtcc
ttgcacatgcagtactgcgggatccgagaagtggccaccggggctttccgaggtcttaag
aggttggtgtatctctacctgtcccacaacgacattagcgcgatcggcgctggagccttt
gatgagttgcctgagctcacttatctctacatggaccacaacaagatcatcgacataccc
aaggggctgctgtctccgctcgccaacctgttcatcttccagctcagcaacaacaaggtg
cgcgagctgaaagcggggaccttcgctggcgccaaggacctgcgctggctctacctgtcg
gataacgagctcaccacgctgcagccggggtccttggatgaagtggaaaacctggccatc
ttccacttagacggaaaccagctgagcacttacccgctggctgccgtcagcaagctgagg
gtggtggaagattataagatctcccgaaaccccatcaaagtcatccctgatttcgccttc
cagtcgtttggccgatacatggaaaccctctccatggaccaaatgggtatcgagaagttt
tcagaaaaagcttttgttggagtgacggccctgaagagtctgaacattgaaggaaataag
ttgagccagcttcctgccaatgccccattctcctccctgcagaacctgacactagcaaac
aacccttggcactgctcctgccaactggcagctgtgagaaggtggattgacggcagccgc
tctcgcccagacgccacttgtgcaagcccggctcaataccgcgggcaacagctgcgagac
acaggggccttccgtgggtgtaaacagccagtaaagaaatcaaaaaaaggagaacgacat
taa
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