Rana temporaria (common frog): 120919004
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Entry
120919004 CDS
T07929
Symbol
NPTX1
Name
(RefSeq) neuronal pentraxin-1
KO
K25709
neuronal pentraxin
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
120919004 (NPTX1)
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Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
Laminin_G_2
HEAT_ULK4
PCI
Hrs_helical
Apolipoprotein
SlyX
Motif
Other DBs
NCBI-GeneID:
120919004
NCBI-ProteinID:
XP_040186874
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Position
12:complement(137972983..137993125)
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AA seq
436 aa
AA seq
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MITGACWRSLLLCFFFLRGSAQNFPQTRFICTSVPLDMDMCTSSMQNSGPTEDLKTTILQ
LRETVLQQKETIINQKDTIRDLTGKLARCEGQTVLEVPSNEPKTGAAPGSKKKETGTPKN
TMGDLSRTPTAETLTQLGQTLQSLKTRLENLEQYSRGNSSVQASSLKDLLQTKIDDLEKQ
VLSRVNNLEEGKVNVKNETELRGKIENALTSLQQRITDLEKGQKENRPADKFQLTFPLRT
NYMYAKVKKSLPEMYAFTVCMWLKSNASPGVGTPFSYAVPGQANELVLIEWGNNPMEILI
NDKVAKLPFVINDGKWHHICIAWTTRDGVWEAYQDGVLRGNGENLAPYHPIKHQGVLVLG
QEQDTLGGGFDATQAFVGELAHFNMWDRKLTVGEVYNLATCSNKALTGNVISWAETNIEI
FGGATKWTFDACRQIN
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggagcctgctggaggagcctcctcctctgcttcttcttcctgcgaggatct
gcccagaatttcccccagaccaggttcatctgcacctcagtgcctctagacatggacatg
tgcacctcctccatgcagaacagtggtcccaccgaggacctgaagaccaccatcctgcag
ctgcgagagacggtcctccagcagaaggagaccatcatcaatcagaaggacaccatcagg
gacttgactggcaagctggccaggtgtgaggggcagacagtgctggaggtgccctccaat
gagcccaagacaggggcagcccctggatccaagaagaaggagactgggacccccaaaaac
accatgggagacctgtccaggacccccactgctgagacccttacccagctgggacagacc
ctacaaagcctgaagaccaggctggagaacctggagcaatacagcagagggaactcgtcg
gttcaagccagcagtctgaaagatttgttgcagaccaaaatagacgacttggagaagcaa
gtcctgtccagagtcaacaacctagaagaagggaaggtcaacgtgaagaacgagacagag
ctgaggggcaaaatagagaatgccctcacctctctacagcagaggatcaccgacctggaa
aaaggtcaaaaggagaaccggcctgccgacaaattccagctcactttccccttgaggaca
aactacatgtatgccaaagtaaagaagagcctcccggaaatgtacgccttcactgtgtgc
atgtggctcaaatccaacgcctccccgggggtggggactccgttttcatatgcggtgcca
ggccaagccaacgagctggtgctcattgagtgggggaataatccaatggaaatattaatc
aacgacaaggtagcaaaattaccttttgtaattaatgatggcaaatggcatcatatctgc
attgcctggacaacacgtgacggtgtgtgggaagcataccaagatggcgtacttcgagga
aatggggaaaacttggcaccctaccaccctatcaaacatcagggagtgctggtgctggga
caggaacaggacacgctaggaggcgggttcgatgccacccaggctttcgttggcgagctc
gctcatttcaacatgtgggacagaaagctgacggtgggagaagtctacaacctggcgacg
tgcagtaacaaagcgctgaccggtaacgtcatcagctgggcagaaaccaacattgagatc
ttcggcggggccaccaagtggacattcgatgcatgtcgccaaatcaactga
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