Rana temporaria (common frog): 120919079
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Entry
120919079 CDS
T07929
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120919079 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120919079 (HDAC5)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120919079 (HDAC5)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
120919079 (HDAC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Ataxin_7
Motif
Other DBs
NCBI-GeneID:
120919079
NCBI-ProteinID:
XP_040186996
LinkDB
All DBs
Position
12:33779183..33938747
Genome browser
AA seq
1149 aa
AA seq
DB search
MRLTKTNPGETTDQDQPGETPHPESRDVSSPERTPLRHQPELRAAPAEGCAWRTEPPGSA
IFAPGLSVKSWALEIQEGGLSPLFMSVQPLDIRMNLPSQSVEVTPLLSAAVPSSSSLPPS
PGELRQEPRAASGPGAVMDPVNREQQLQQQLILLKQQQQLQKQLLFAEFQKQHENLTRQH
EVQLQKHLKQQQEILAAKRQQELEQQRKRERQRQEEAEKQRLEQQLLILRNKEKSKEILP
FVPVCHFVSHQGAIASTEVKLKLQEFLLSKSKEVPGIANHSILQHPKCWGTHHTSLDHGS
PPQAGSPATPPSYKMSLLGTCDGRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRK
DGTVISAFKKRAIEIQVSSVCNSAPGSGPSSPNSSNSAICENGLTGSVPNIASEMLPQQR
VLTLDGTGGPLGLYTSPSLPNICLQGSASSLSGQFTPQEGAERQTLRSGGPFLSTTTLPT
LDGGEISLGAPSLLQHVLLLEQARQQSALITVPLHGQSPLVGGERVSSSLRSVTKGPRHR
PLSRTQSSPLPQSPQALQQLVLQHQHYLDQQQLSKMQVVFYQTVEGLRPPPTHPEETEEE
LTEQDGGERCRAVFTLDGGTESEETQEEEEGGDDDDEDSEEGPTNGSESTFKKLFPDALP
LYQGSLPHSALSRTQSSPAAPLTSCSSESRRRVLSTTGLVYDTLMLKHQCTCGDTNNHPE
HAGRIQSIWSRLQETGLLGKCQRVRGRKATLDEIQTVHAEHHTLLYGTSPQSRHKLESKN
LLGEELTVQARDKSGEINEEWGPLSQKMYAVLPCGGIGVDSDTVWNELHSPAAVRTAVGS
LLELTFKVASGELKNGFAVIRPPGHHAEESVAMGFCFFNSVAIAAKLLRLKMNVGRILIV
DWDIHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGSPEEVGTGCGVGYNVNIAWTGG
VEPPIADAEYLAAFRTVVMPIAQEFSPDIVLVSAGFDAVEGHQSPLGGYSVTAKCFGHLT
AQLMSLAGGRVVMALEGGHDLTAICDASEACVSALLGLEPAPIENSVLQQRPNDNALSTL
ERVIAIQRKHWSSLNNMTVGHSLLEARRGEAEEAEAVTALASLSVDTEQSNTDCISRPLE
EPMEEEPAP
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaccaagaccaaccccggagagacgaccgaccaagaccaacccggagagacc
ccacaccccgaatcccgagacgtctcctcacctgaacggacgcctctgagacaccagcca
gagctcagggcagcgccagccgagggatgtgcatggagaactgagcctcctggaagcgcc
atctttgcccccggcctgtcagtcaagtcctgggctttggagatccaggaagggggtctt
agtcccctcttcatgtctgtccagccgttggacatcaggatgaaccttcctagccaatct
gtggaggtcacccctctcctttctgcagcagtgccctcttcaagcagcctccccccaagt
cccggggagttgaggcaagagccacgggcagctagtggtcccggagcggttatggacccg
gtgaaccgggagcagcagctccagcagcaactcatcctcctgaaacagcagcaacaactt
cagaaacagctactttttgccgagttccagaagcaacatgagaacctgacaaggcaacac
gaggtccagctccagaagcacctcaagcagcagcaagagattttggcagccaagaggcag
caggaattggaacagcaaaggaaacgagagaggcagagacaagaggaggccgagaaacag
agactggagcaacaactcctgatactcaggaacaaagagaaaagtaaagagattttacct
tttgtccccgtctgtcattttgtgtcccaccaaggtgccatagccagcacagaggtgaag
ctaaagcttcaggaattcctgctcagcaagtctaaagaggtgccaggaattgcaaaccat
tccatcctacagcaccccaaatgttggggaactcaccatacctcactagaccacggctcc
cctcctcaggcgggatctccagctactcctccttcttacaagatgtctctactgggaacc
tgcgatgggcgagatgactttcctcttcgcaaaactgcctctgaacctaatctaaaagtc
cgctcacggttaaagcagaaggttgcagagcgacgcagcagccccctcctccgcaggaag
gatggaacggtcattagcgctttcaagaagagagccattgagattcaagtgtcctcagta
tgtaatagcgcccccggatcaggacccagctccccaaacagctcaaatagtgccatctgt
gagaatggattgactgggagtgtgcccaatattgccagtgagatgttgcctcagcaaaga
gtccttacgttagacgggacaggagggcctttgggcctatacacttctccgtcactaccc
aacatctgcctacagggaagcgccagcagcctcagtggccagtttaccccccaggagggg
gctgaacgccaaaccttaaggtcgggtggtcctttcctcagcaccacaaccctccccacc
ctggatggaggggagatcagtttaggtgccccgtccctactgcagcatgtcctcctattg
gagcaagccaggcagcagagtgcccttataacagtcccgttacatggtcaatcgcccctg
gtggggggagaacgcgtgtccagttccttacggtcggtcacaaaaggcccacgacatcgt
ccgctgagccgcacacagtcctctccactcccgcaaagtccccaggcccttcagcaacta
gtacttcaacaccagcactacctagaccaacagcagctcagcaagatgcaggttgttttc
tatcagactgtggagggattacgcccgccacccacccaccccgaggaaacagaggaggaa
ctgactgagcaagatggcggagagcggtgtcgagctgtgttcaccttggatggaggcaca
gagagcgaggaaacgcaagaggaggaagagggaggagatgacgatgacgaagacagtgaa
gaggggccgaccaacggctcagagagcacattcaaaaagctgttcccagatgccctccct
ctctatcaaggctctcttcctcattcagccctaagtcggacccagtcctctccagcagct
ccactcacctcctgcagttcagaatcgcgacgacgtgtcctgagcactacaggcttagtc
tatgacactcttatgctgaagcatcagtgtacctgtggagacaccaataaccacccagag
catgctgggagaatacagagtatctggtcccgactgcaagaaactggtctcctcggcaag
tgccagcgcgtacgaggaaggaaagccacgctggatgaaattcagacggttcatgctgag
catcacaccctgttatatgggaccagcccacagagccgtcacaagctggagagcaagaac
ctgctgggtgaggagctgactgtacaggctcgtgataagtctggggaaataaatgaagaa
tggggacctctttctcagaagatgtatgcagttctgccctgtggagggattggggtggac
agtgacactgtgtggaacgaactacactccccagctgctgtccgaacagctgttggttcc
cttcttgagctgacattcaaagtggcatctggagagctgaaaaatggatttgcagttatc
cgacccccaggacaccacgctgaggaatcggttgccatgggtttctgtttttttaactct
gtagctatcgctgccaaattgctccgcctgaagatgaatgtgggccggatcctgatagtg
gattgggatattcaccatggtaatggaacacaacaagccttctacagtgaccccaatgtc
ctttacttgtctctccaccgttatgatgatggcaacttctttcccggtagtggctctcca
gaggaggttggcaccggttgtggcgtgggatacaatgtgaacattgcatggacaggaggt
gtggaaccccctattgcggatgctgaatatcttgctgctttcagaacggtggtcatgccc
atagctcaggagttctcccctgatattgtcctggtctccgcaggatttgatgcagtggag
gggcaccagagcccactcggaggatactctgttacagctaaatgttttggtcaccttacc
gcacagttgatgtctctggcgggtggaagagttgtcatggctttggaagggggtcatgac
ttaacagccatctgtgacgcctctgaggcgtgtgtatcggctcttctaggcttggagcct
gcgccaattgagaacagcgtcctgcagcaaaggcccaacgacaacgcactgagcacacta
gagagagtcattgctatccagagaaaacactggagctccttaaacaacatgactgtgggt
cattcccttttggaagcacggcgaggagaagcagaggaggcggaagccgttactgcattg
gcctcattatcagtagatacagaacagagcaatacagactgtatctctaggccattggaa
gagcccatggaggaagagccagctccttga
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integrated database retrieval system
