Rana temporaria (common frog): 120919097
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Entry
120919097 CDS
T07929
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120919097 (CDRT1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120919097 (CDRT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SPT8
F-box-like
F-box
Beta-prop_Nup120_160
WDR90_beta-prop_4th
NBCH_WD40
WD40_like
Beta-prop_HPS5
Beta-prop_IFT140_1st
VPS8_N
Beta-prop_DCAF12
WD40_2
Beta-prop_WDR19_2nd
WDR54
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
120919097
NCBI-ProteinID:
XP_040187037
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All DBs
Position
12:complement(145255143..145273803)
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AA seq
1061 aa
AA seq
DB search
MEVSELDLRLAPDLRCENRTSKVPLCQACETCVLAAQVAAAKEWFPRAGDRSQRRFLFGV
VRRMKGADLLAFVEKALQPALGKDFTYSRSRINPSLARDLATAGSDRGLDRRRLRQFMVE
TWDWVKGGSYWSKANYALQLLQMCDPHLLHSAANLIHVLIVQQRQRGDSQKEPFGADEMG
HSEETDHTAQDDPSLMVVPTSFQSTSGVRKYKDFIRCLPVHLSKKILGYLKKKHLFSCLS
VSRHWCYVTKELFLDLEAETLVRNEAMILQGTSYKGVSVSYAKVQPVPVPKVGEDGNVLP
RLEKYYKDVKPGESVEAAYVETETETEFLEERNVFCGSYNVLILTGQGDPHRVIHFAGGQ
LVAAGSTDRRVKIYDMVEMAQVPPLIQGHSGSIRVVHLCEERGFVFSAGFDLSIRQWKLQ
TGVCLRIFHGHMKTITCLDVREDLLVSGAKDGHVKVWNITTGKCLRTFKHKDPVLAVKMK
DQTVISGCEKGLVKIWHNESAQLIKTLTGHQGAIKCLSFDPWHLVSGGADGYAIAWSMLG
SFQKRLMTFRHPKEVMCLEFLYLRVITGCADGKIRVFNFLNGDCLRVMRANSRADPVANM
CIRDNRMVINVLTSIMIFQFEEVSWDYSQTSERVDTLKERERFHSSPIRVRPYSYVRAQR
MKRVGSSNRKIYQMNEEEEEMKAKTQLSHHARSLSARSTKRAHDLHLKSLKPATWPELTN
YRRSFAYIDLQPEFFKKPPSARRPQTAGQSIADVYSRASTAPPARTKEDSDGESGYGSPG
RKSALSTSQSATLRRMKRRGPHTPMSPNQILLKVGTIQNLQKGDKVGTNLEYNSRIRDEW
GAPPSNDKDGKAVAQYSIESQQVDLSALLQYLKSSAAPIEMRTIMTAFETRKLSLKMNES
IHGPGVQSTIPAPTILRPQTSFTSRKKQRSLALQRRSTSAVETNAKKIGLYTSLETLQPL
RMVMGQRQEKAAPPKSRVTAQVASLDPYRERGGFRLLTVKQLKEFQAQKMLQHKEVEALT
QTMKTKESKKAWLMKIQGKNIDGFTKEGKIAVPEFGPDVYL
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggaagtctccgaactggatctgcgtttggccccggaccttcgctgcgagaaccggacc
tccaaggtgcccctctgccaggcctgcgagacctgcgtcctggccgcgcaagtggccgcc
gccaaagaatggttcccgcgggccggcgaccgatcccaaaggaggttcctgttcggggtg
gtgcggcggatgaagggcgccgacctgctggcgttcgtggagaaggcgctccagccggcg
ctggggaaggacttcacctacagccggtcccggatcaaccccagcctggcgcgcgacctc
gccaccgccggctcggaccgggggctggaccggcggcggctgcggcagttcatggtggag
acctgggactgggtgaagggcgggtcctactggagcaaagccaactacgccctgcagctg
ctgcagatgtgcgacccgcacctgctgcacagcgccgccaacctaatccacgtgctcatc
gtccagcagaggcagcgaggagactcccagaaggaaccattcggagctgatgaaatgggc
cattcggaagagactgaccacaccgcacaagacgacccgtctctaatggtggtccccact
tccttccagtccacatcgggagtcagaaagtacaaagacttcatccgctgcctcccggtg
cacctctccaagaagatcctggggtacctgaagaagaagcacctcttcagctgtttgtcc
gtgtcccgtcattggtgttatgtgacaaaggagcttttcctggatctagaagccgagacg
ttggtgcggaatgaagccatgatccttcaggggacgtcctacaaaggagtcagtgtctcc
tatgctaaagtgcaaccagtgcccgtgcccaaagtcggagaggatggcaacgttctacca
aggctggagaagtattacaaagatgtaaagcccggggaaagtgtggaagccgcgtatgtc
gagaccgagacggagacggagttcctggaggaaagaaacgtcttctgtggatcatacaat
gttctcattcttaccggacagggcgatccacaccgggtgatccattttgccggggggcag
ctggttgctgccggctctacggaccggagagtgaagatttacgatatggtggagatggcc
caggtcccgcctctcattcagggccacagcggaagtatccgcgtcgtccacttatgtgaa
gaaagaggcttcgtgttcagcgcgggattcgatctcagtatcaggcagtggaagctccag
accggggtgtgcctccgaatctttcatggccatatgaagaccataacgtgcctggatgta
cgagaggatctgctggtctccggagcgaaggacggccatgtcaaagtgtggaacatcacc
accgggaaatgcctgaggaccttcaagcacaaggaccccgtactggcggtgaaaatgaag
gatcagactgtgattagcggctgtgagaaggggctggtgaaaatctggcacaacgaatcg
gcacaattaatcaagacattaacaggccaccagggagcaataaagtgcctttcctttgat
ccatggcatttggtatcaggtggcgcagacggatacgccattgcctggagcatgctggga
agctttcagaagcgactgatgaccttcaggcatccaaaggaggtgatgtgtttggagttc
ctctacctcagagtcattacaggctgcgcagatggaaaaatccgcgtgtttaacttcctc
aatggggactgcctccgagttatgagggccaatagcagagcagaccccgtcgccaatatg
tgcattcgcgataacagaatggtcataaatgtcctgaccagcatcatgatcttccagttc
gaggaggtgtcgtgggattactcacagacatcggaaagagtggacaccctcaaagaacgg
gaaaggtttcactcctcccccatccgggtcaggccttacagttatgtccgagcccagaga
atgaaacgagttggatccagcaaccggaagatctaccagatgaatgaggaggaggaggag
atgaaggccaagactcaactgtcccaccacgctcgaagcttgtctgctagaagcactaaa
agagctcatgatctacatttgaagtctctaaagccggcgacgtggcctgagctgaccaat
taccgcaggagttttgcctacattgacttacagcccgagtttttcaagaagcccccatca
gcacgccggccacaaacagcggggcaaagcattgcagatgtctacagcagagcgagcacc
gcgccgcccgccaggactaaagaggattccgatggagagtcgggttatggttcccccggt
cgcaaatcagccctttccaccagccagagtgcgacccttcgtcgcatgaaaagacgcggt
cctcacacgccaatgagtcccaaccaaatcctcttaaaagttggcaccatacagaattta
cagaagggtgacaaggttgggaccaacctggagtacaactcaaggatccgggacgaatgg
ggagctccaccgtccaacgacaaagacggaaaggcggtcgcacaatactccatagaaagc
caacaagttgacctttccgcccttctccagtatctgaagtcttctgctgccccgatagag
atgaggacaatcatgaccgccttcgaaactagaaagctgagccttaaaatgaacgagtcc
attcacggaccgggcgtccagtccaccataccggcccccaccatcctgcggccccagacc
agttttacttctagaaagaaacaacgaagcttggctttgcagagaaggtccacctccgcc
gtggaaaccaacgcaaagaaaattggtttgtatacgagcctcgagaccctccaacctcta
cgaatggtcatgggccaacgccaagaaaaggccgctcccccgaagagccgagtgaccgcg
caggttgcatctttggacccgtacagggagcggggagggttccggctcctcaccgtcaag
cagttgaaggagttccaagcacagaagatgctgcagcataaagaagtggaggccttgacc
cagaccatgaaaaccaaggagagcaagaaggcctggctgatgaagatccaagggaagaac
atcgatggcttcaccaaggaaggaaaaattgcagtgcctgaatttgggccagatgtatat
ctatga
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integrated database retrieval system
