Rana temporaria (common frog): 120919103
Help
Entry
120919103 CDS
T07929
Symbol
CFAP52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtem03037
]
120919103 (CFAP52)
Cilium and associated proteins [BR:
rtem03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120919103 (CFAP52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
NBCH_WD40
WD40_like
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_LRRK2
WDR54
CFAP43_N
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
120919103
NCBI-ProteinID:
XP_040187051
LinkDB
All DBs
Position
12:complement(145533761..145557708)
Genome browser
AA seq
618 aa
AA seq
DB search
MESEGQEGDMQLELDSVIGFNGHVPSGLISHPDREHLIYPLGCTVVIENLNKHKQYFLHG
HTNNVSCVAISKNGRYLASGQVTYMGFKADIFLWDYAKRESCGKLTLHKVKVEALAFSPN
DQYLVSLGGQDDGSVVLWNVITKEPICGSPASSLSAGHAVGVSFSNNRDDVFITSGHGTL
RVWEVDLQNRKLRPTECQMGQLKRVVTCLVVAEDDSCFYCGTSTGDILKMNTKTKLLNSC
GPQKGRFTLGVTSLNLLKTGELLIGSGDGKLSLCKEPNYKAAKKVQLQGAITSITLRGQG
HQFFVGTSQAQIYRFNYSEFKEELVATCHSEAINDIVFPFGTSELFATCAKNDIRVWHTT
SHKELLRITIPNMTCNAIEFTRDGKSILSAWNDGKIRAFTPESGRPMYQIENAHSMGVTA
IAVTSDCKRIVSGGGEGQVRVWEIGRESQRLVESMKEHKSAVSCIKLKSNNRECVTASSD
GACIIWDLVRFIRKQMILSNTLFRCVCYHPEEFQIITSGTDRKIGYWEVFDGSPIRGLEG
SMSGAINGMDISDSGSHFVTGGNDKLVKVWDYNEGEVTQVGIGHSGSISRIKICPLSQYI
ISVSSDGAILRWKYPHPV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaggggcaggagggagacatgcagctggagctggactcagtcatcggcttt
aatggccacgtgccctctgggctgatctctcacccggaccgggagcacctcatctacccc
ttaggatgcaccgtcgtcattgagaatctcaacaaacacaagcagtactttcttcatggc
cacaccaacaatgtctcctgtgtggccatctccaaaaacggacggtacctggcatcaggg
caagtcacctacatgggattcaaggcggacattttcttgtgggattatgctaagagagag
tcttgcggcaaactgaccctgcacaaagtgaaagtggaggccctggcattctcaccaaac
gaccaatacctggtgtcactgggagggcaggatgatggcagcgtggtcctatggaatgtg
ataaccaaagaacctatctgcgggagcccagcgtcatcgctcagtgccggacatgccgtg
ggcgtctccttctccaacaacagggacgatgtcttcataactagtggacacggcacactc
cgtgtctgggaggtggacctccagaacaggaagctgcgtccaactgagtgtcagatgggt
cagctgaagagggtggtcacctgcctggttgtggcagaagatgacagctgcttctactgc
ggcacctccacaggagatatcctgaagatgaacacaaagaccaaactgctgaacagctgt
gggccccagaaaggcagattcaccctgggagtgacatctctgaatttgctgaaaacagga
gagcttctgattggctctggagatgggaaactgtcactctgcaaagaaccgaactataag
gcagctaagaaggtccagctgcagggggccatcacctccatcaccctccggggacagggc
caccagttctttgtgggaacctctcaggcgcagatctaccgtttcaactattcagaattt
aaggaggagcttgtagcgacgtgtcacagcgaagccatcaatgacatcgtcttccccttt
ggtacttcagagctgtttgcgacgtgtgccaaaaatgacatccgggtttggcacacaacc
agccacaaggaactgctgcggatcaccatacccaacatgacctgcaacgccatcgaattt
actagagacggcaagagcatcctatcagcctggaatgacggaaagatccgagcgttcaca
cccgaaagcgggcgacccatgtaccagatagaaaacgcccacagcatgggagtgaccgcc
atcgcagtgacgagcgactgcaagaggattgtgagcggaggaggggaaggacaggtgaga
gtgtgggagatcggaagggaaagccagcggctcgtagaatccatgaaggaacacaagtcg
gcggtgtcctgcatcaaactgaagagcaacaaccgggagtgtgttaccgccagctcagac
ggcgcctgcatcatatgggacctcgtgaggtttatacggaaacagatgatcttatccaat
acattgttccgctgcgtctgttaccaccccgaggagttccagatcatcaccagcggcacc
gacagaaagatcggctactgggaagtgtttgatggctcgccaataagaggtctcgaggga
tccatgtctggcgccatcaatggaatggacataagtgacagcggaagtcactttgtgaca
ggtgggaacgacaagctggtgaaggtttgggattacaacgagggcgaggtgacccaagtg
ggcattgggcacagcggaagtatcagccggataaagatctgccccctctcccaatacatc
atcagcgtcagcagtgacggggcgattctgcgctggaaatacccgcatcccgtctag
DBGET
integrated database retrieval system
