Rana temporaria (common frog): 120919224
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Entry
120919224 CDS
T07929
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120919224 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtem04515
]
120919224 (CDH4)
Cell adhesion molecules [BR:
rtem04515
]
Cadherins
Major cadherins
120919224 (CDH4)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_FAT4_N
He_PIG
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
120919224
NCBI-ProteinID:
XP_040187214
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Position
12:complement(20078518..20915299)
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AA seq
925 aa
AA seq
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MKMSRLGAKMPKGSGSALLLLLALPGALGAYIGNGTAQQSCTPGFSEQGYTAHVSPNIKE
GQRLLKVKFNGCSSGTQGIWYETSNPDFKVGTDGAVYTARKVQIPSKQAIFVVAAWDQQT
PEKWEAAIRLLVEDKPLNHSHHQRVLQVRPSEHPHIQSRTLLPWRQHRVANGLRRQKRDW
VIPPVNVPENSRGPFPEMLVRIRSDKDRESMIRYSITGIGADQPPMEIFNIDPISGKMYV
TRPLDREERSSYHLRAHAVDMNGNKVENPIDLSIYVIDMNDNRPDFSSLVFNGSVDEASK
PGTYVMTVTAHDADDINTSNGIVMYRIMTQSPQSPSQDMFVIHSETGVINTVAAGLDREK
VQQYTVVIQATDMEGNLNHGLSNTATAIITVADVNDNAPEFTTKVFTGEVPENRIEAAVA
NLTVVDRDQPYTPNWNAIYKIISGDPVGHFAVRTDPVTNEGIVTVVKPVDFEMNKGFLLN
IMVTNQAPLASGIQMSLQSTSAVTISIVDVNEAPYFPNRNDPVRQLEGEPAGKLLTTFSA
VDPDRSLQQALRYSKLYDPANWLTINATNGQVFTTAVLDRESPFVKDDIYEAKFLATDNG
VPPASGTGTLQIQLIDINDNAPELVPKEAQICERLNSNGINITATDVDRKPSGDPFVFEL
PTVPSTIRRNWTITRINGNYARLSLQIGYLESGVYEVPIIVTDSGNPPLYNTSMIRVKVC
PCDENGDCTTIGAVAATRLGTGAIIAILICIIILLSMVLLFVMWMKRREKERHTKQLLID
PEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPETLDHVLNKVAGVRRVDERPVGAEPQYP
IRPVIPHPGDIADFISEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSEDQ
DFEYLNDWGPRFKKLADLYGGGEED
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtcccgtctgggtgcaaagatgccaaaggggtcggggagcgctctgctgctg
ctgttggccctgcccggggcactgggggcatacattgggaatggtactgcacagcaaagt
tgtacaccgggcttctcagaacaaggctacaccgctcacgtatcaccaaacatcaaagag
ggacagagactactaaaagttaaattcaatgggtgcagtagtggaacgcagggcatctgg
tacgaaaccagcaatccagattttaaggttggcacagatggggcggtgtacacagcccgc
aaggtccagatcccctcaaaacaagccatttttgtggtggctgcctgggaccaacagacc
cctgagaaatgggaagccgccatccgactgctagtggaagacaagccactcaaccacagc
catcaccagcgagtcctgcaggtccgaccatccgagcatcctcatatccaaagccggacc
ctgctaccatggcgacagcatcgtgtggctaatggcctgcggagacagaagagagattgg
gtgattcctccggtcaatgtaccagagaattcgaggggaccatttcctgaaatgttggtg
cggatccgctcagacaaggaccgggagagcatgatccggtacagcatcacgggtattgga
gctgatcaacccccaatggaaattttcaatatagaccccatttctggcaagatgtatgta
acaagaccgctggacagagaagagagatcatcgtaccatctcagggcacacgctgtggac
atgaatgggaacaaggtggaaaatcccatcgatctctccatctacgtcatcgacatgaat
gacaaccggccggatttctctagcttggtgttcaatggctcagtggatgaagcttcaaaa
ccaggtacctatgtgatgacagtgactgcacacgatgctgatgatatcaacacgtcaaat
gggatcgtcatgtaccgcatcatgacacagagtccgcagagcccctcccaggatatgttt
gtgatccacagcgaaacaggagtcattaatacagtggcggcaggtctggacagagagaaa
gtccagcagtacactgttgtcattcaagccacagatatggagggaaacttaaaccatgga
ttatccaacacagccacggccatcataactgttgcagatgtcaatgacaacgcaccggag
tttaccactaaagtgttcaccggtgaggttccagaaaatcgcatcgaagccgctgtggcc
aacctgaccgtggtagaccgggatcagccatatacgcccaactggaacgccatatacaaa
ataatcagcggtgatcctgttggccactttgctgtcagaactgaccccgtcaccaatgag
ggcatcgtcactgtggtgaagccagtggactttgagatgaacaagggctttttactaaac
attatggtgacaaatcaggcacctctggccagtgggatccaaatgtctctacaatctaca
tctgcggtgaccatctccattgtggacgtaaacgaagccccttactttcccaaccgaaat
gacccagtcagacaactggagggagagccggctgggaaactgctgaccaccttttctgcc
gtggatcctgaccgctccttgcagcaagctctacggtactctaagctgtacgacccagca
aactggctcaccatcaacgccacaaatgggcaagtgtttactaccgctgtgctggaccgc
gaatcgccctttgtgaaagatgacatttatgaagccaaattcctagccacagacaacgga
gtgccccctgccagtggcactggaacattgcagatccagctgattgacattaatgacaac
gctcctgagttggttcccaaagaggcccagatctgcgagagactgaattcaaacggcatc
aacattactgccactgacgtggaccgaaaacccagcggagatccatttgtgtttgaactg
ccaaccgtgccctccaccattaggaggaactggaccattaccaggatcaatggtaattac
gcaaggctgagtctacagattggttacttggagtcgggagtgtatgaagttcccataatt
gtgacggactcaggaaacccccctctctataacacgtcaatgatccgagtgaaagtttgt
ccctgcgatgagaatggagattgtactacaatcggagccgtggctgcaacgcgactgggg
acgggagccattatagccatcctcatctgtattatcatcctgctatccatggttcttctg
tttgtcatgtggatgaagcgtcgggagaaggagaggcacaccaagcagctgctcattgac
ccagaggacgatgtgagagacaatatactcaagtatgatgaggaaggaggaggagaagag
gaccaggactacgatttaagccaactacagcagccagagaccttggaccacgtcctaaac
aaagtggccggtgtcaggcgggtggatgagaggccagtaggagccgaacctcagtatcca
atcagacctgtcataccacacccaggagacattgccgacttcatcagcgagggcctgaga
gcggcagacaacgaccccaccgcgccaccttacgactcgctgctggtttttgactatgag
gggagcggatccaccgcgggttccgtcagctccctcaactcctccagctctgaggatcag
gactttgagtacttgaacgactggggcccccgctttaaaaaactggctgacttgtacggc
ggtggagaggaggattga
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