KEGG   Rana temporaria (common frog): 120919224
Entry
120919224         CDS       T07929                                 
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    120919224 (CDH4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rtem04515]
    120919224 (CDH4)
Cell adhesion molecules [BR:rtem04515]
 Cadherins
  Major cadherins
   120919224 (CDH4)
SSDB
Motif
Pfam: Cadherin Cadherin_pro CADH_Y-type_LIR Cadherin_FAT4_N He_PIG Stevor DUF5527
Other DBs
NCBI-GeneID: 120919224
NCBI-ProteinID: XP_040187214
LinkDB
Position
12:complement(20078518..20915299)
AA seq 925 aa
MKMSRLGAKMPKGSGSALLLLLALPGALGAYIGNGTAQQSCTPGFSEQGYTAHVSPNIKE
GQRLLKVKFNGCSSGTQGIWYETSNPDFKVGTDGAVYTARKVQIPSKQAIFVVAAWDQQT
PEKWEAAIRLLVEDKPLNHSHHQRVLQVRPSEHPHIQSRTLLPWRQHRVANGLRRQKRDW
VIPPVNVPENSRGPFPEMLVRIRSDKDRESMIRYSITGIGADQPPMEIFNIDPISGKMYV
TRPLDREERSSYHLRAHAVDMNGNKVENPIDLSIYVIDMNDNRPDFSSLVFNGSVDEASK
PGTYVMTVTAHDADDINTSNGIVMYRIMTQSPQSPSQDMFVIHSETGVINTVAAGLDREK
VQQYTVVIQATDMEGNLNHGLSNTATAIITVADVNDNAPEFTTKVFTGEVPENRIEAAVA
NLTVVDRDQPYTPNWNAIYKIISGDPVGHFAVRTDPVTNEGIVTVVKPVDFEMNKGFLLN
IMVTNQAPLASGIQMSLQSTSAVTISIVDVNEAPYFPNRNDPVRQLEGEPAGKLLTTFSA
VDPDRSLQQALRYSKLYDPANWLTINATNGQVFTTAVLDRESPFVKDDIYEAKFLATDNG
VPPASGTGTLQIQLIDINDNAPELVPKEAQICERLNSNGINITATDVDRKPSGDPFVFEL
PTVPSTIRRNWTITRINGNYARLSLQIGYLESGVYEVPIIVTDSGNPPLYNTSMIRVKVC
PCDENGDCTTIGAVAATRLGTGAIIAILICIIILLSMVLLFVMWMKRREKERHTKQLLID
PEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPETLDHVLNKVAGVRRVDERPVGAEPQYP
IRPVIPHPGDIADFISEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSEDQ
DFEYLNDWGPRFKKLADLYGGGEED
NT seq 2778 nt   +upstreamnt  +downstreamnt
atgaagatgtcccgtctgggtgcaaagatgccaaaggggtcggggagcgctctgctgctg
ctgttggccctgcccggggcactgggggcatacattgggaatggtactgcacagcaaagt
tgtacaccgggcttctcagaacaaggctacaccgctcacgtatcaccaaacatcaaagag
ggacagagactactaaaagttaaattcaatgggtgcagtagtggaacgcagggcatctgg
tacgaaaccagcaatccagattttaaggttggcacagatggggcggtgtacacagcccgc
aaggtccagatcccctcaaaacaagccatttttgtggtggctgcctgggaccaacagacc
cctgagaaatgggaagccgccatccgactgctagtggaagacaagccactcaaccacagc
catcaccagcgagtcctgcaggtccgaccatccgagcatcctcatatccaaagccggacc
ctgctaccatggcgacagcatcgtgtggctaatggcctgcggagacagaagagagattgg
gtgattcctccggtcaatgtaccagagaattcgaggggaccatttcctgaaatgttggtg
cggatccgctcagacaaggaccgggagagcatgatccggtacagcatcacgggtattgga
gctgatcaacccccaatggaaattttcaatatagaccccatttctggcaagatgtatgta
acaagaccgctggacagagaagagagatcatcgtaccatctcagggcacacgctgtggac
atgaatgggaacaaggtggaaaatcccatcgatctctccatctacgtcatcgacatgaat
gacaaccggccggatttctctagcttggtgttcaatggctcagtggatgaagcttcaaaa
ccaggtacctatgtgatgacagtgactgcacacgatgctgatgatatcaacacgtcaaat
gggatcgtcatgtaccgcatcatgacacagagtccgcagagcccctcccaggatatgttt
gtgatccacagcgaaacaggagtcattaatacagtggcggcaggtctggacagagagaaa
gtccagcagtacactgttgtcattcaagccacagatatggagggaaacttaaaccatgga
ttatccaacacagccacggccatcataactgttgcagatgtcaatgacaacgcaccggag
tttaccactaaagtgttcaccggtgaggttccagaaaatcgcatcgaagccgctgtggcc
aacctgaccgtggtagaccgggatcagccatatacgcccaactggaacgccatatacaaa
ataatcagcggtgatcctgttggccactttgctgtcagaactgaccccgtcaccaatgag
ggcatcgtcactgtggtgaagccagtggactttgagatgaacaagggctttttactaaac
attatggtgacaaatcaggcacctctggccagtgggatccaaatgtctctacaatctaca
tctgcggtgaccatctccattgtggacgtaaacgaagccccttactttcccaaccgaaat
gacccagtcagacaactggagggagagccggctgggaaactgctgaccaccttttctgcc
gtggatcctgaccgctccttgcagcaagctctacggtactctaagctgtacgacccagca
aactggctcaccatcaacgccacaaatgggcaagtgtttactaccgctgtgctggaccgc
gaatcgccctttgtgaaagatgacatttatgaagccaaattcctagccacagacaacgga
gtgccccctgccagtggcactggaacattgcagatccagctgattgacattaatgacaac
gctcctgagttggttcccaaagaggcccagatctgcgagagactgaattcaaacggcatc
aacattactgccactgacgtggaccgaaaacccagcggagatccatttgtgtttgaactg
ccaaccgtgccctccaccattaggaggaactggaccattaccaggatcaatggtaattac
gcaaggctgagtctacagattggttacttggagtcgggagtgtatgaagttcccataatt
gtgacggactcaggaaacccccctctctataacacgtcaatgatccgagtgaaagtttgt
ccctgcgatgagaatggagattgtactacaatcggagccgtggctgcaacgcgactgggg
acgggagccattatagccatcctcatctgtattatcatcctgctatccatggttcttctg
tttgtcatgtggatgaagcgtcgggagaaggagaggcacaccaagcagctgctcattgac
ccagaggacgatgtgagagacaatatactcaagtatgatgaggaaggaggaggagaagag
gaccaggactacgatttaagccaactacagcagccagagaccttggaccacgtcctaaac
aaagtggccggtgtcaggcgggtggatgagaggccagtaggagccgaacctcagtatcca
atcagacctgtcataccacacccaggagacattgccgacttcatcagcgagggcctgaga
gcggcagacaacgaccccaccgcgccaccttacgactcgctgctggtttttgactatgag
gggagcggatccaccgcgggttccgtcagctccctcaactcctccagctctgaggatcag
gactttgagtacttgaacgactggggcccccgctttaaaaaactggctgacttgtacggc
ggtggagaggaggattga

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