Rana temporaria (common frog): 120919347
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Entry
120919347 CDS
T07929
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtem01002
]
120919347 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120919347 (USP38)
Enzymes [BR:
rtem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120919347 (USP38)
Peptidases and inhibitors [BR:
rtem01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120919347 (USP38)
Ubiquitin system [BR:
rtem04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120919347 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120919347
NCBI-ProteinID:
XP_040187399
LinkDB
All DBs
Position
1:516319780..516367197
Genome browser
AA seq
1034 aa
AA seq
DB search
MDKILEGLVTSNHPLNLKKVIVKKVVESAENSINEEQCKAMFSLTTRLILEGDDYFQKQV
GHQVLEAYARYHRAEFEIFFNRTFVLNLLQEGFGSLDRKDVAIIDYIHSGLKLIMSCPSV
LDIFAVLQVEVLRIVCERPEPLLCARLSELLSDFVQCVPKGKMSIAFCQQLVRTIGHFQC
ISTLEKVLREYVSQVTKVGGLLQNIWKAEPCTLLPSLQEVFAIISSTDVSFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTRALCRMIDWLSWPLAQHVETWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHMIVPHVVNLVQ
SFKSDGLPSSSAFLVQFSELMHCMIYHYSGFPDLYEPILEALKDLPKPPEEKVKLILNQS
AWTSQSNALASCLPRLSGKSETGKTGLINLGNTCYMNSVLQALFMATDFRRHVLSLNLNG
CNLLMKKLQHLFAFLAHTQREAYAPQIFFESSRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KSFRALSSSMPAADQMVTDGGLQSSQSGGTDTLPRVQNTGWGLEEKTLIEGMFGGKLQTT
ICCLNCRSTSQKMEAFTDLSLAFCPSSDKPVQSMICSPKEKDDDDCIEIDDAPSGEEQRV
FVLSAQDDCGKSTELQSAVSGLQSSSNNTTVDAPACDDALSSNSDLCRKTDKDETLSVTD
LLNYFLAPEILDGENQYHCEKCASLQNAEKTMHIIEEPEYLILTLLRFSYDPKCHVRRKI
LDNVSIPLALELPVERSTSVACSEDRTQDADVTDVSENLAKKLKPSGIEDLCCTKLVPYV
LSSIVVHSGTSSESGHYYSYARNVTSTSRYLCHEKPYQGPLVSKDTSNSVVENDTACNDM
SKEWFLFNDSRVTFTSFQSVLNITNRFPKDTAYVLLYKKHSCSDTSNVHPSAVNGLWVNG
EPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPSGG
GGDGGFSTISRLVF
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattttggaaggcttggtgacttctaaccatcctctgaatttgaagaaagtt
attgttaaaaaagttgttgagtctgctgaaaattctatcaatgaggaacaatgcaaagct
atgttcagtctcaccactcgcttgatactagaaggagatgactactttcaaaagcaagtc
gggcaccaagttttggaagcctatgcaagatatcaccgtgctgaatttgaaatttttttc
aacagaaccttcgttctaaacctcttgcaagaaggctttggatctttagaccggaaagat
gtagctattattgactatattcacagtgggctgaagttgattatgagttgtccatctgtt
ttagacatttttgctgttttgcaagtagaagtattaagaatagtatgtgaaaggccagag
cctttgttatgtgctaggttaagtgaactactaagtgactttgtgcaatgtgtgcccaaa
ggtaaaatgtccattgcattttgccagcagcttgttagaacaattggacattttcagtgc
atctctacgctagaaaaggtgttaagggagtatgtttctcaagttaccaaagttggtggt
ttgctgcaaaatatctggaaagctgagccatgcacattacttccatctttgcaagaagtg
tttgcaattatttcttccacagatgtttcatttgaaccatctgttgctttggcgagtctt
gtgcagcacattcccttacagatgattactgttctcatcagaagtttgaccaccgatcct
aatgtgaaagatgcaagcatgactcgggctctctgcaggatgattgactggctttcctgg
cctttagcacagcatgtggagacatgggtgatcgctctgctgaagggactggcagcagtc
cagaaatttactattctaattgacgttactttgctaaaaattgaactggtattcaacaga
ctgtggtttccactggtaagacctggagcattggctgtgctttctcacatgctgcttagc
tttcagcattctccagaggctttccatatgattgtgccacatgttgtaaatctggtccag
tcttttaaaagtgatggcctcccatccagttcagcattccttgttcagttttccgaactg
atgcactgcatgatctatcactattctggattcccagacctttatgaacctatcttggaa
gcacttaaggacttgccaaagccccctgaagagaaagtaaaactcatattaaaccaaagt
gcctggacatcccaatccaatgctttggcatcatgtctacccaggctatcggggaaatcc
gaaactggaaaaactggtctcattaatctagggaatacctgttatatgaatagtgtacta
caagcactttttatggctacagatttcaggaggcatgtgttgtcactgaatttgaatggg
tgcaatttactaatgaaaaaactgcaacatctctttgcttttttggcacacactcagagg
gaagcttatgctcctcagattttctttgagtcttctaggccaccttggttcacaccacga
tcccagcaagactgctcagagtacctccgctttctattagacagactacatgaagaagag
aaatccttcagagctctgtcgtcctcaatgcctgctgctgatcaaatggttactgatggt
ggtttgcaatcatcacaatctggcgggacagacacccttcctcgagtgcagaacactggg
tggggtcttgaagagaagactttaatagagggtatgtttggagggaagctacaaactacc
atttgctgcctgaactgtagaagcacttctcagaagatggaagccttcactgacctttct
ctggccttttgtccatcatctgataaacctgtccaaagtatgatctgctccccgaaagag
aaagatgatgatgattgcatagaaatagatgatgcaccatctggcgaagagcagagagtt
tttgttctttctgcacaagatgattgtggaaagtccactgaactacagtctgctgtcagc
ggtcttcagtccagtagtaataacaccactgtggatgcaccagcatgtgatgacgcattg
tcatctaacagtgacctgtgtagaaagactgataaggatgaaacactttctgttacggac
ttgttgaactatttcctagcaccagagatacttgatggagaaaatcaatatcattgtgaa
aaatgtgcttccctccagaacgctgaaaagactatgcatataatagaagaaccagaatac
ctcattttaactctgttaaggttttcatatgaccctaaatgtcacgtgagacggaaaatc
ctggataatgtgtccattccactggcacttgaattgccagttgaaaggtctacctcagtg
gcttgttctgaagatagaactcaagatgcagatgttactgatgtcagtgagaacctggct
aaaaagctgaaaccatctggtattgaagatctatgctgcacaaagcttgtcccttatgtt
cttagctccattgtggtccattctggtacctcatcagaaagcggccattactattcatat
gcaagaaatgtcaccagtacatcacgctatctctgccatgagaaaccttaccaaggtcct
ttagtgagcaaagacacctcaaactcggttgttgaaaatgacactgcatgtaatgacatg
tctaaagaatggtttctgtttaatgatagtcgagtgacatttacttcatttcagtctgtt
ttaaatatcaccaatcggtttccaaaagacacagcttatgtgctgttatataaaaagcac
agttgtagtgataccagtaatgtgcatcctagtgcagtaaacggactttgggtaaatggg
gaaccaccacttcagaaggagctgatggatgccattaccaaggacaataagctctactta
caggaacaggaacttaatgcccgtgcgcgggctctacaagcagcatctgcttcctgctcg
ttcagacccaatggatttgatgacaatgaccctcctggaagttgcgggccaagtggcggt
ggtggagatggaggtttcagcaccatcagcagacttgtcttttaa
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integrated database retrieval system
