Rana temporaria (common frog): 120919350
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Entry
120919350 CDS
T07929
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120919350 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120919350 (TAF4)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120919350 (TAF4)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120919350 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
120919350 (TAF4)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
120919350 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
120919350
NCBI-ProteinID:
XP_040187400
LinkDB
All DBs
Position
12:19952094..20013826
Genome browser
AA seq
1065 aa
AA seq
DB search
MAAGSDLLDDFFNTDVDEKVVSDLVGSLESELAAAAHHHHHHHHPQQPPQPHPGPPEVRS
QALANHVASPAGVGAAATAGGQPEAKIGLPQDLPKTGAAVPGVQGGVINNTRLQTAPQPD
GLQSAGSETGGPHSQAKSGVLGNIVTSLPNHGSGNGKPAAIQTMNGNNVVMNSHGPGGHG
AQFQGNSNPTPGVNLVNNGPASVTKGGVNTAANTVIQTSYLATTNVSASVISSSASTTAG
QPTGMAGVPTTVALVRPLMHQGVPATQNGSNTVINSPLPAPGGVSLQMNSQPSQAPSQVI
KSESPKTIIQTPQQSQPAPGNMVIGQTMQAGHPGPGGAGPGTPTAMGKPSVSTMPQSLPR
TPTAPLGGIRATINPPMLAPRMPPPQQNPPNIQNFQLPPGMVLVRSENGQLLMIPQQALA
QMQAQVQAQAQSQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQNAMVTRPATPT
TAPSVQISTVQSPGAPLMTRQVTPTTIIKQVSQTPTTVQPTTTLQRPPVVQNQIVLGSTA
QTATLGTASAVQTGTPQRAVQGTATPATATTETMENVKKCKNFLSTLIKLASSGKQSSET
AANVKELVQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQ
QSQQQQPAAQATTALTAVMLNNPAQRTAGKTTATVTNTLQQPVISPAQHVHSKPGQPSPL
VIQQAHKAGAVVRHQQVTLTQTPMVALRPPQSRIMLTTPQQIQLNQLHSVPVVKPNVVAG
TKAFSTMAAAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELV
GTLTRSCKDELFLLPAVLQRRILEIGKKHGITEVHPDVVGYVSHATQQRLQNIVEKISET
AQQKNISHKEDDRYEQTTDVRTQLKFFEQLDQLEKQRKDEQEREILMRAAKSRSRQEDPE
QLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKMDSPGHGSGSEASSTSTTPSS
SSGAGSSRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcggatctgctggatgatttcttcaacacggacgtggacgagaaagtg
gtgagcgatctggtgggctccctggagtccgagctggcggccgccgcccaccaccatcat
caccaccaccacccgcagcagccgccacagccgcacccggggccccccgaggtccgcagc
caggccctcgccaaccatgttgccagccctgccggggtaggggccgccgccaccgccggg
ggacagccggaggccaagatcggactcccccaggacctccccaagacgggagcagctgtg
cctggagtccaaggaggcgtcattaacaacacccgactgcaaacagcccctcagccggat
ggacttcagtctgctggatcagagacgggaggacctcacagtcaggccaaatctggggtc
cttggcaacattgtaacttctttgcccaaccacggctcaggtaatggcaaacctgcggcc
attcagaccatgaatggaaataatgttgttatgaattctcatggacctggggggcatgga
gcccaatttcaggggaacagtaacccgacgcctggagttaatcttgtcaacaatggccct
gcttctgtcaccaagggcggtgtgaacacagctgccaatacggtgatccagacttcttac
cttgcaacaaccaatgtgtcggcctctgtcatctcctcatctgcatcgacgacagctgga
cagcccacaggcatggcaggtgtacccactactgtagcgctggtgagacctcttatgcat
cagggagtgccagccacccagaacggaagcaatactgtgatcaattcccctttgccagct
cctggtggggtgtctttgcaaatgaacagccagcccagccaggcacctagccaggtgatc
aaatcggagtcccctaaaactattattcagactcctcagcagagccagcctgcccctggg
aatatggttattggacagactatgcaagcaggacatccaggccctggaggagcaggtcct
ggcaccccaacagcaatgggcaaaccttcagtcagcactatgcctcaaagtttgccaagg
actcctacagcaccgcttggtggcatcagggcgaccataaatccacctatgttggcgccg
cggatgccaccgcctcaacagaatccaccaaacatccaaaactttcagcttccgccaggg
atggtccttgtacggagcgagaacgggcagctgttgatgatcccccagcaggcactggcc
cagatgcaggctcaggttcaagcacaggctcaatcacaggcccaggctcaggcccaagcc
caggctcaggcccaagctcaggcccaggcccaagcccaagctcaagctcaggcccaagcc
caagcccaagcccaggcccaggcccagaatgcaatggttactcggcctgcaacgcccacc
actgccccgtctgtgcagatctccacagtccagtcccccggtgcacctttgatgacgcgg
caggttacgccaactaccatcatcaagcaagtatctcagacgccaacgactgtgcagccc
accaccacactacagagaccccctgttgtacaaaatcagatagtgctcggcagcacggcg
caaactgccactttggggacagcgtcggccgtccagactggaaccccgcagagagcggtg
caaggaactgctaccccagcgacagccaccacggaaaccatggaaaatgtgaagaaatgt
aagaattttttatccactctcataaaactggcctcatcgggtaaacagtcttcagagacg
gcagctaacgttaaagagctagtacagaatctgctggatgggaaaattgaagcagaggat
ttcaccagtagattatacagagaactgaactcttcacctcaaccttaccttgtgcctttc
ctaaagaggagcctccctgccttgcgccagctgacccctgactcagcagcctttatccag
cagagtcagcagcagcaaccggccgcccaggccacgacagccctcaccgcagtcatgcta
aacaaccctgcacagcgaacagctggcaagaccactgccaccgtcacaaatacattacaa
cagcctgtcatcagccccgcacaacatgtacattctaaacctggccaaccatccccactg
gttatccagcaggcacataaagctggggccgttgtacgacaccaacaggtcacattgacc
caaacgcccatggtagcacttagaccgcctcaaagccgaattatgctcaccactccacaa
cagatacagctaaaccagctgcattcagtcccagtggtaaaaccgaatgttgtagctggc
acgaaagccttttccacgatggcagcagcgcaagcggcagccgcacagaaaaacaaatta
aaagaaccagggggaggatcgttcagggatgacgatgatatcaacgacgtggcttccatg
gcgggggtgaacctgtcggaggaaagtgcgcggatattggcaacgaattccgaattagtg
gggacgttaacgcggtcttgtaaagatgaattgtttctgctccctgcggtattacagagg
cggatactggagatcggtaagaaacacgggataacggaagtccatccagacgtggtcggt
tatgtctcgcacgccacgcaacagcgattacaaaacattgtagagaaaatctcagaaact
gctcagcaaaagaacatctctcacaaagaggacgatcggtacgagcagacgactgatgtt
cggacgcaacttaagtttttcgaacagctcgaccagctagaaaaacagaggaaagatgag
caggagagagaaattctcatgcgggcggcaaagtctcggtcacggcaggaagatccagag
cagttacggttaaaacagaaagcaaaggagatgcagcaacaggaattggcacaaatgagg
caaagagatgcaaacttaacggcgttagcagctatcggccctcgaaaaaagaggaaaatg
gactccccaggccatggttcagggtcagaggcatccagcaccagtacaacaccctccagc
agctccggagcaggcagtagcagacagtttacacggcagcggataacgcgtgtcaatctc
agggacctcatattttgtttggaaaacgagagagagacaagccattcacttttgctatat
aaagcattcctaaagtga
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integrated database retrieval system
