Rana temporaria (common frog): 120919373
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Entry
120919373 CDS
T07929
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120919373 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120919373 (SMARCA5)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120919373 (SMARCA5)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
120919373 (SMARCA5)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
120919373 (SMARCA5)
RSF complex
120919373 (SMARCA5)
WICH complex
120919373 (SMARCA5)
B-WICH complex
120919373 (SMARCA5)
NORC complex
120919373 (SMARCA5)
BRF complex
120919373 (SMARCA5)
NuRF complex (fruit fly)
120919373 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
120919373
NCBI-ProteinID:
XP_040187444
LinkDB
All DBs
Position
1:516689482..516801628
Genome browser
AA seq
1036 aa
AA seq
DB search
MSEESAETQRQEPVKEEEEGGKKTELDGEGAGVKEEVTAKGESENDSDFPFKQKESSGED
SFYEEKRQTDRSNRFDYLLQQTELFAHFIQPAAQKTPTSPLKMKPGRPRLKQDEKQNLLS
VGDNRHRRTEQEEDEELLTESSKTTNICTRFEQSPSYVKNGTLRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRSIPGPHMVLVPKSTLHNWMAEFKRWVPSLGA
VCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGD
QKLVERLHLVLRPFLLRRIKADVEKSLPPKKEVKIYIGLSKMQREWYTKILMKDIDILNA
SGKTDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKE
QGSRLLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDDRQESILAYNAPGSSKFIFML
STRAGGLGINLATADVVVIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERI
VERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITEEGINAI
LERGEKKTAELKEKLSNMGESSLRNFTMDTDSSVYNFEGEDYREKQKLAFTQWIEPPKRE
RKANYAVDAYFRDALRVSEPKIPKAPRPPKQPNVQDFQFFPPRLFEFLEKEILYYRKTIG
YKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTSWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPDDVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENLELEEKEKAEKKRRGPKPSSAQKRK
MDGAPDGRGRKKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggagagcgccgagacgcagaggcaggagccggtgaaggaagaagaagagggc
gggaaaaagacggagttggacggtgaaggagccggtgtgaaggaggaagtgactgcgaaa
ggagaatctgagaatgacagcgatttccccttcaaacaaaaggaaagcagtggagaagat
tctttttatgaggagaaaaggcaaacagaccggtccaaccgatttgactatctactgcaa
cagacagagttgtttgcgcactttatacagcctgcagcacagaaaacgccaacctcacca
ctaaaaatgaagcctgggcgacctcggttaaagcaagacgagaagcaaaatttattatcc
gttggagataatcggcatcgtagaacagagcaggaagaagatgaagagctgttaacggaa
agttcaaagacaacaaatatttgtaccagatttgagcaatcgccctcttatgtaaaaaat
ggcacgttaagagactatcaagtcagaggcttgaattggctaatctctttatatgaaaat
ggaataaatggcatcctggctgatgaaatgggtctagggaagactctacagaccattagt
cttcttggatatatgaagcattataggagcattcctgggcctcacatggtattagttccg
aagtctaccttgcacaattggatggctgaattcaaaagatgggtgccatctttaggtgca
gtttgtcttattggtgacaaagatcaacgagcagcctttgttagagatgttcttctacca
ggtgaatgggatgtttgtgtgacatcttacgaaatgctcattaaggagaagtctgttttc
aagaagttcaattggcgatacttggttattgatgaagcccacaggataaagaatgaaaaa
tcaaagttgtctgaaattgtgagggagttcaagacgactaaccgcctcctcctaacagga
acccctcttcagaataatttgcatgaactttgggctcttttgaattttcttttgcctgat
gtctttaactcttcagaggattttgactcctggtttgataccaataactgtcttggagat
cagaaactggtggaacgtcttcatttggtgttgaggccgttcctcctccgtcgtattaag
gctgatgtggagaaaagccttcctcccaagaaagaagttaaaatctatattggccttagt
aaaatgcaaagagaatggtatacaaaaatcctaatgaaggatattgacattttgaatgca
tcagggaagacggataaaatgcgacttttgaacgttctaatgcagttgcgaaaatgttgt
aatcatccttatctctttgatggtgctgaaccaggtccaccatacactacagatatgcac
ttggtcacgaatagtggcaaaatggtagtactggacaaattgcttccaaaactaaaagaa
caaggttcacgtctactgatatttagtcaaatgacaagagttttggacatcttggaagat
tattgcatgtggcgaaactatgaatattgccgactggatggacaaacgccacacgatgat
agacaggaatctattcttgcatacaatgctcccggcagctcaaaatttatttttatgttg
agcacccgtgctggtggtcttggcattaaccttgctactgctgatgttgtcgtcatatat
gattcagactggaaccctcaagttgacctccaagccatggatagggcgcacagaattgga
caaacaaaaactgtcagagtcttcagatttatcacagataatacagttgaagaacgtatt
gtggagagagcagaaatgaagctacgtttggattccatagttattcagcaaggtagatta
gtggaccaaaatttaaacaaacttggaaaggatgaaatgcttcagatgattagacatggt
gccacacatgtgtttgcatcaaaggatagtgaaatcacagaggaaggtattaatgccatc
ttggaaagaggtgaaaaaaagactgcagaactaaaagaaaagctctcaaacatgggtgag
agttcattgagaaacttcactatggatacagattccagtgtatacaactttgaaggtgaa
gattacagagagaagcaaaagttggcatttacacagtggattgaaccaccgaaacgtgaa
agaaaagccaattatgctgtggatgcatactttagggatgcacttcgcgttagtgaacca
aagatacccaaagctccccgcccaccaaaacagccaaatgttcaggattttcagttcttt
cctcccaggctgtttgaattcttggaaaaggaaattctgtactacagaaaaacaattgga
tacaaggtcccacgcaatcctgatttacctaatgcagcccaggcccaaaaggaggagcag
ttaaagattgatgaagcagagccacttaatgacgaggagctggaagaaaaggaaaaattg
ttgacacagggctttaccagttggaacaaaagagactttaaccagtttatcaaagctaat
gaaaaatgggggcgggatgacattgaaaatattgcccgtgaagttgaaggcaaaacgcca
gatgatgtaatggagtattcagctgtcttttgggaaagatgtaatgagctccaagatatt
gaaaaaataatggctcaaatagaaagaggagaagcccgcatacagaggaggataagcatc
aagaaagctctggatacaaagattggtcgatacaaagcaccttttcatcagctaaggata
tcatatggcacaaataaaggaaagaactacacagaagaggaagaccggtttttaatatgc
atgctacacaaacttggttttgataaggaaaatgtgtacgatgaactaaggcagtgtatc
cgaaactctccacagttcagattcgactggtttctgaaatcaagaactgcaatggaacta
caaagaagatgtaatactttaatcacattgattgaacgggagaacttagagttggaagag
aaggagaaagcagagaaaaagagacgtggaccaaagccttcttcggcacagaagcggaaa
atggatggcgctcctgatggcaggggaagaaaaaaaaagcttaagctttga
DBGET
integrated database retrieval system
