Rana temporaria (common frog): 120919423
Help
Entry
120919423 CDS
T07929
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120919423 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtem03021
]
120919423 (SMARCD2)
03036 Chromosome and associated proteins [BR:
rtem03036
]
120919423 (SMARCD2)
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120919423 (SMARCD2)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120919423 (SMARCD2)
PBAF complex
120919423 (SMARCD2)
GBAF(ncBAF) complex
120919423 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
120919423
NCBI-ProteinID:
XP_040187521
LinkDB
All DBs
Position
12:27928123..28007000
Genome browser
AA seq
478 aa
AA seq
DB search
MSTRGGLPLPQMHMMRGPTPGLYRPPPGPYQRPGMLPGARMQVPGMPVGSPMMPGYGAGP
PMRPGMNPMLIEPFRKRLMAPQGHPSAGAHRRGMKRRKMADKVLPQRIRELVPESQAYMD
LLAFERKLDQTIARKRMEIQDAIKKPLTQKRKLRIYISNTYTPGKPEGDEAERVSSWELR
VEGKLLDDPSKLKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRMATTQETDGFQVKRPGD
VNVKCTLLLMLDHQPPQYKLDTRLARLLGVHTQTRANIMQALWLYIKNNKLQDSHEKEYI
NCNRYFRQIFNCIRMRFSDIPMKLASLLQHPDPIIINHNISVDPNDQKKTACYDIDVEVD
DPLKAQMSNFLQSTTNQQEIANLDVKIHETIESINQLKTQRDFMLSFSNTPQEFIQDWLK
SQSRDLKIMTDVMGNPEEERHSEFYEEPWTQEAVGRYVFFKVQQRRQELEQVLGIRLT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaaggggtggtctgcctctccctcaaatgcatatgatgagaggaccaactccg
gggttataccgacccccaccgggaccttatcagagacctggaatgcttcccggagcacga
atgcaagtgccaggcatgccggttggttcacccatgatgccaggatacggtgcaggtcct
cccatgaggcctggaatgaaccctatgttgattgaaccatttagaaagagacttatggcc
ccacaaggacatccttctgcaggcgcccacaggaggggaatgaagagaaggaaaatggct
gacaaggttctgccccagaggatccgggaattggtccccgagtcacaggcatacatggac
ctgttggcttttgaaagaaaactagaccagacaatagccaggaaaaggatggagatccag
gatgccatcaaaaagcccctgactcaaaagcggaagctgaggatctatatttccaacaca
tacactcccgggaaacccgagggagacgaagcagagagagtcagttcctgggagctgcgg
gtcgaaggaaaactgctggatgatcccagtaagctgaagaggaagttctcttcattcttt
aagagccttgttatcgagctggataaagatctttatgggccagacaaccacttggtggag
tggcacagaatggcaaccactcaggaaacagatgggttccaggtgaagagacccggggac
gtgaacgtgaaatgcaccttgcttctaatgctggaccaccaacctccccagtataaattg
gacacccgcctggctcggctcttgggtgttcacactcagacccgtgccaacatcatgcaa
gctctgtggctgtacatcaagaataacaagcttcaggacagccatgagaaggagtacatc
aactgtaaccggtacttcaggcagatctttaactgcatccgaatgaggttctccgacatc
cccatgaagctggcaagtcttttgcagcacccggatcccataataattaaccacaatatt
agtgtggaccctaacgatcagaagaagaccgcgtgttacgacattgatgtggaggtggac
gaccccttaaaggcccaaatgagcaactttcttcagtcaactactaaccagcaggagatc
gccaacctggatgtcaagattcacgagacgattgaatccatcaaccagctgaagacacag
agggatttcatgttaagctttagcaacaccccccaggaatttatccaagactggctaaaa
tctcaaagcagggatctcaagatcatgacggacgtgatggggaatccagaggaagagaga
cattcggagttctatgaagagccctggacccaggaggctgtggggagatacgttttcttc
aaggtccagcagcggagacaagaacttgagcaggttctgggaatacgtctgacatga
DBGET
integrated database retrieval system
