Rana temporaria (common frog): 120919488
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Entry
120919488 CDS
T07929
Name
(RefSeq) oocyte zinc finger protein XlCOF28-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120919488
03036 Chromosome and associated proteins [BR:
rtem03036
]
120919488
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120919488
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120919488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-H2C2_5
zf-C2H2_16
zf-Di19
zf-C2H2_8
zf-C2H2_6
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2HE
Hva1_TUDOR
zf-C2H2_ZNF462
Suppressor_P21
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
120919488
NCBI-ProteinID:
XP_040187608
LinkDB
All DBs
Position
12:complement(12089840..12122658)
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AA seq
842 aa
AA seq
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MEEPGEGVPAQETEVLCMTDPDRSEAELAFQVYKMLDGNEAFSNVSEYHMVPVQAADGSI
IGVQVTGVQRGEEGNPSLLPTQLIEFHNVGEAEQPQAEQPLPEESVTPADPPADDPEQTE
AVQELDGHESSQISDAAVELAETSEQNEPTPQPSADLEKQEMKTLYRCGQCQFGSLMMSV
MRRHLRRHSSKHKCHVCEKTFCSARELKLHVSTHTGVRPHKCTNCDMAYRTASDLLRHIR
SIHTLDKPFKCCYCDYSSVEANRMKIHIRSHTGERPFACSECAFATTDAFKLRRHLRTHT
GEKPYTCHVCGAQFTQNASLKMHILRKHTENVQKEQCIICNAVLFGKNDVKVHIRKQHTY
LEVPIKCRICSEEFHERYLYRQHQESHRFLKKMELKSNKQDIQTYELEEEAEAEITTTTT
IEDRVSWNIVPGTGEAQLFLNYHEGEHQGTVTELHSIPMQTEDGSIVQAIVLQSAEQVDA
EAMHTEVYEMQDLAQVFRPMVEQQSSEPIVLTLESIDPDTQSAEQQSVVPDFIPQAASTP
RPPSIKGRRIQPISPEQQIEVKLHRCKDCDKTFSTGMELLKHKKIIHRPENMFKCPFCEN
ESTGALELILHIQVHNDDRPFHCEQCNFSTTDSFKLTRHKRTHTGEKPFTCNVCEAKFTQ
KTSMLMHIQRKHTKELPKLSCPLCKTILTGKHSLSIHLRKQHTHSETELKCRFCPATFRE
RFVLREHQKTHRNEKPIKSVLPRAKRRKIMEKSQSDQVNFEEQEPVIGAQAEEYTWQVLP
AEQETQIHFVLSGPEEATSVTEYHLLPVQADDGSVISIEVSEIEEVEQMEAGTIHQVILG
DI
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccggagaaggggtcccggcccaggagacggaggtcctgtgtatgacggac
cccgaccgtagtgaggccgagctggccttccaagtctacaagatgctggatgggaacgag
gccttcagcaacgtgtccgagtaccacatggtgccagtccaggcggccgacggctccatc
atcggcgtccaggtgaccggtgtacagaggggggaggaaggcaaccccagtctcctgccc
acccagctcattgagttccacaacgtgggggaagctgagcaaccccaggccgagcaaccg
ctgccagaggagagtgtgaccccggccgatcccccagcagatgaccccgaacagaccgag
gctgtacaggagttggatggccatgaaagttcacagatatctgatgccgctgttgaactg
gcggaaacttctgagcagaatgagccaactccacaaccgtccgcagacttggagaagcaa
gaaatgaagactctgtaccggtgcggtcagtgccaattcggctccttaatgatgtcggtt
atgaggcgccacctgcgcagacattccagcaaacacaagtgccacgtttgcgagaagacg
ttctgcagcgccagagaactaaagctccacgtcagtactcacacgggggtccgcccgcac
aaatgtaccaactgtgacatggcttacagaacggcgtccgacctcctacgccacatcaga
tccatacatacacttgacaaacccttcaagtgctgctactgcgattattcaagtgtggag
gcaaataggatgaagattcacatccgatctcacactggggagcggccgtttgcatgtagt
gagtgcgcttttgcgaccacagacgcctttaaactgcgaaggcacctgagaacgcataca
ggtgagaagccgtatacgtgccatgtgtgcggggcccagttcacgcagaacgccagcctg
aagatgcacatcttaagaaaacacactgagaacgtgcagaaggagcaatgtatcatctgt
aatgccgtactgtttgggaagaatgacgtaaaggttcatatccgcaagcagcacacctac
ctggaggttccgatcaagtgccgcatctgctcggaggagtttcacgagcgctacctctac
cggcaacatcaggagagtcacaggttcctaaagaaaatggagctgaaatccaacaagcaa
gacatacagacttatgagttggaggaggaggcggaagccgagatcaccaccaccaccacc
atcgaggacagagtgtcctggaacatcgtaccgggcacaggcgaggcgcagctgtttcta
aactatcacgagggggagcatcagggcactgtgacggagctgcacagcatacccatgcag
acggaggatggcagcattgtgcaggccatagtgttgcagagcgcagagcaggtggacgcc
gaggcgatgcataccgaggtgtacgagatgcaagatctggcccaagtctttcggcccatg
gtggagcaacagtcctccgagcccatagtcctaaccctggagtctattgatccggacaca
cagagtgcagagcagcagagtgtcgtccccgacttcattccccaggcggcttccacaccc
cggccgccatccattaaagggaggcggatccagccaatcagccccgagcagcagatcgag
gtgaagctgcatcggtgtaaagactgtgacaagaccttctctaccggcatggagctcctg
aaacacaaaaaaataatacacaggccagagaacatgtttaaatgtcctttttgtgagaat
gagtctacgggggccctcgagctgatccttcacattcaggtccacaatgatgatcgccca
ttccactgtgaacaatgcaacttctccacaactgattccttcaagctgaccagacataag
agaactcacacaggagagaagcctttcacatgtaatgtatgtgaggccaagttcacgcag
aagaccagcatgctgatgcacattcagcggaaacacaccaaagagctccccaaattaagc
tgtcctctgtgtaaaaccatcctgaccgggaagcacagtctgagcattcacctacggaag
cagcacactcactcggagaccgagctgaagtgccgtttctgtcccgccacgtttcgggaa
cggtttgtcctccgggagcatcagaagactcatagaaacgagaagcccatcaaatcagtc
ctcccgagggcaaaacggagaaaaatcatggagaagagtcagagcgatcaggtgaacttt
gaggagcaggagccggtgatcggtgcccaggcggaggagtacacctggcaggttctaccg
gcggaacaagagacccaaatccactttgtgctcagcggtcccgaggaggcgacctcggtg
acagagtaccacctcctgccagtgcaggcggacgacggcagcgtcattagcattgaggtg
tcagagatagaggaggtggagcagatggaagcgggtacaatccatcaggtcattttaggg
gatatctaa
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