Rana temporaria (common frog): 120919563
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Entry
120919563 CDS
T07929
Name
(RefSeq) P43 5S RNA-binding protein-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120919563
03021 Transcription machinery [BR:
rtem03021
]
120919563
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120919563
Transcription machinery [BR:
rtem03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
120919563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
TFIIIA_zf-C2H2
Zap1_zf1
zf-H2C2_2
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_STOP2_C
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
120919563
NCBI-ProteinID:
XP_040187702
LinkDB
All DBs
Position
12:complement(89076079..89445517)
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AA seq
368 aa
AA seq
DB search
MQQCMVNKPGPKPVFCCPTIGCKATFCKKLRLQEHMVKHTGLKPFRCDQLGCGKTFIRKS
KLHDHWQKHQGVKKYVCSAAECRAAFVTKQMLKHHRQHKHGKTASLKCSVFGCSKIFHKK
RALKNHLSVHRAEPCFACNHAVCEWKGSTSASLTTHRRRHAGYCCPFPGCQAKSPTWSAL
QKHRKQHPLELQCPKCKKSFKKEAALQRHKETHLDKKITVACPRKDCTQTFTTVFNLTHH
VRKDHLCLQPYRCYHAGCNGTFAMRESLLRHLVVHDPNREKMKLKFNFKPSKKHLRGALC
QIPVVEEDLSHLFNQKLCFRSKTILESNLSILFNERLLRDPVEPEVNLSNLFQLVSAHAG
KGGLKVCK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtgtatggtgaacaaaccaggcccaaagcctgtcttctgttgtcctactata
ggatgcaaggcaacattctgcaaaaaactgagattgcaagaacatatggttaaacatact
ggactgaaaccatttcggtgtgaccagctggggtgtgggaagacatttatccgaaaatcc
aaactacacgatcactggcaaaagcaccagggtgtgaagaagtatgtttgctcagctgct
gaatgtcgagcagcctttgtaactaaacagatgttgaaacatcatcggcagcataaacat
ggaaaaactgcctccctaaagtgctcagtttttgggtgttccaaaatctttcataagaag
agagctttaaaaaatcacttgtcggtgcacagagctgaaccctgctttgcttgtaatcac
gcagtttgtgaatggaaaggttcaactagtgcaagtcttacaacccatcgccgacgccat
gcagggtactgctgccctttccctggttgccaagctaaatctccaacctggagtgctcta
cagaaacacagaaaacaacatcctttggaacttcaatgcccaaagtgtaaaaagtctttt
aaaaaagaggctgctctgcagagacacaaagagacccatctggacaaaaaaatcactgtg
gcctgtcccagaaaagactgtacacagacatttactacagtcttcaacctgacgcatcat
gtaagaaaggatcatctatgcttgcagccttaccgttgttaccatgctggctgtaatggc
acctttgccatgagggaaagtctgcttagacatcttgtggttcatgatcctaacagggag
aaaatgaagctcaaattcaactttaagccatcaaagaagcatttaagaggagccctctgc
caaatccctgtagtggaggaagatttgagtcatctatttaatcagaaactttgcttccgg
agtaaaacaatcctggagagtaacctgtccatactcttcaatgaacgtctgttacgtgat
cctgtggagccagaagttaacctcagtaacctcttccagcttgtatctgcccatgctggg
aaaggtggcttaaaggtctgcaaatga
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