KEGG   Rana temporaria (common frog): 120919600
Entry
120919600         CDS       T07929                                 
Name
(RefSeq) integrin alpha-IIb-like
  KO
K06476  integrin alpha 2B
Organism
rtem  Rana temporaria (common frog)
Pathway
rtem04510  Focal adhesion
rtem04512  ECM-receptor interaction
rtem04810  Regulation of actin cytoskeleton
rtem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rtem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120919600
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120919600
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120919600
   04810 Regulation of actin cytoskeleton
    120919600
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rtem01009]
    120919600
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtem04147]
    120919600
   04515 Cell adhesion molecules [BR:rtem04515]
    120919600
   04090 CD molecules [BR:rtem04090]
    120919600
Protein phosphatases and associated proteins [BR:rtem01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120919600
Exosome [BR:rtem04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120919600
Cell adhesion molecules [BR:rtem04515]
 Integrins
  Integrin alpha subunits
   120919600
CD molecules [BR:rtem04090]
 Proteins
  120919600
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 120919600
NCBI-ProteinID: XP_040187754
LinkDB
Position
12:complement(31068292..31160070)
AA seq 1062 aa
MSQRRNTHSKRREVSFCFLCSWIDRTMLLCLLLLTLPYTHSLNLDKLNPQNFSGPHGSYF
GFSFDFYQSADNRMNIVVGAPKLNAWVLNVRSGGGLFLCPWGSQTSSCSPIPFNDRSGDT
FLTSEGRMTISKSDQWLGATVRTWKSSIVACAPFQQYNFEDLSFSRTGHSGRTPTGACYL
TEDLQNFYEFAPCRQTKTERVSIWNSYFQDNRYCEIGFSTEISKEGVLLAGGPGGYSFEG
LYVTIPLSSILGNSAVIREFPDLYMSEENRRVSNAYKGFAVAYGEFTEDDSPEIVLGSPI
MLSRGMVEIYSGSKNMVTFKGEQTASYFGHSVAVTDINGDGLDDLLVGAPLFMERKSSGK
FLEVGQVYIYLQKRPRIVDRNPQILNGNRVYGHFGASIAPLGDLDQDGYNDVAVGSPFGG
QSGAGCVYIYKGEKSGLSTHPSQILESPQAAPSSFGFSLRGGQDIDQNGYPDLVVGAFEA
DTVYVFRAQPVVHLYTSLIFTPDSLNPDLKNCKQPSIGDVSCFTVRVCVRTSGKSLPNTL
SLSADIQLDSQKSRFLRRTLFTDSSQPSKKITMESQSNSQRTCTDIGAHLRGENEFKDKL
SPIVISVNVSLNTAPSSSILPPIIHGNTFLQEQIHILLDCGEDNICIPDLQLSAGWGMDP
LVIGEENLVQIHFDAENLGEGAYEAELHATLPPGAHYMQILGEVEEKILCTPRKANDTEL
VVCELGNPMKNGAQIHAGLLLSISDLEDSEGNFSFPMQIKSRNSQNPSSSVVWVHLNVTV
KILLDLRGNTHPSDVVLPLPNWKPKEESDKPLDKGEIVTHVYELHNAGPGTVNVKLVIES
PERYEEDIFLYPLRLKPDEQLNCTSGELNFLQLDIAEPTKTPSDFSKGGDHTLKKREALG
MDQDGGNTGTENSTSTKDGPKHKQPITLSCGDSACWKVECVIDNLDKGRRVTVALESVLW
ISSFMKRPQQPFNLTSRGYFQVTGVPYRIKPTTVKDTEKQAVTVVQWVTLDGQKEIPMWW
IILGVLGGLLILALFVFVMWKLGFFRRTRPPSDDEQDLTGDK
NT seq 3189 nt   +upstreamnt  +downstreamnt
atgtcgcagagaaggaatacccatagtaaaagaagagaagtcagtttctgctttctttgt
agctggattgatcgcaccatgctgctgtgtctgctgcttctcaccctcccctatacccac
tccctaaatctggataagctgaacccccaaaacttttctggaccccatggaagctacttt
ggattctcctttgacttctaccagtcagcagataacagaatgaacatagttgtgggggct
cccaaactgaacgcatgggttctgaatgtccgtagtggcggaggtctgttcttatgtcca
tgggggtcacagaccagcagctgctcccctataccgtttaatgatcgatcaggtgacacg
tttctaaccagcgaaggaagaatgaccatttctaagtctgatcagtggcttggagcaacc
gtcagaacctggaaatccagcattgtggcctgcgctccctttcagcaatataactttgag
gacctcagttttagccggactggacattcggggaggactccaacaggggcctgctacctt
accgaggacctgcaaaatttctacgaatttgctccttgtcgacaaaccaagacggagagg
gtttcgatatggaatagctattttcaagataaccgttactgtgagattggatttagcaca
gaaataagcaaggaaggtgttttgctagctggaggacctggcgggtattcctttgaagga
ctctacgttacaatccctctttccagtattctgggaaattctgcagtgataagggaattt
cctgacctctacatgtcggaggagaatcggcgtgtgtctaacgcctataaaggttttgca
gttgcttatggtgaatttacagaggatgactctccagagatagttcttggaagcccaatc
atgttaagcaggggcatggttgaaatctattcaggcagcaaaaatatggtgaccttcaaa
ggagaacagaccgcctcctattttggccattcagtagccgttacagacatcaacggagat
gggcttgatgatctactggtgggagctccccttttcatggagcgcaagtcgagtggaaag
ttcctggaagttgggcaagtctacatatatctgcagaagagacccaggattgtggacagg
aaccctcagatcctcaacggaaatcgtgtgtatggacattttggtgcatccattgctcct
ctaggagacctggatcaagatggatacaatgatgtggctgtaggctctccttttggaggt
cagtctggagctggctgtgtttacatttacaagggtgagaagtcagggctgtctacacat
ccatcacagatcttggagagcccccaagcagcaccatccagttttggcttttcattgaga
ggagggcaagacattgatcagaatggatatccagatctggtagttggagcttttgaagcg
gacacagtctatgtcttcagagcccaaccggtagttcatctctatacttcattgatattc
actccagattccttgaacccggacctgaagaactgtaaacagcccagtattggtgatgtc
agctgcttcacagtgcgcgtctgtgtccggacctcggggaaaagtctacccaacacactg
agcctgtctgctgacatccagctggacagccagaagagccgatttctccgcagaaccctc
ttcaccgattcatcgcagcccagcaaaaaaatcactatggagagccagagcaattcacag
cggacctgcaccgatatcggggcccatctgcggggtgaaaatgagtttaaggataagctg
agcccaatagttatcagtgtgaacgtcagtctgaacactgcaccatcttctagcatctta
ccacctataatacatgggaacaccttcctacaagagcagatacatatattactggattgt
ggagaagacaatatctgcattcctgacctgcagctgagtgctggctggggtatggatcca
cttgttattggagaggagaatcttgtacaaatccactttgatgcagaaaaccttggagaa
ggggcttacgaagcagaattgcacgctacgcttccccctggggctcattatatgcagatt
ttgggagaagttgaggagaagattttgtgcactccaagaaaagcgaatgacacagaactt
gtggtgtgtgagctgggtaaccccatgaagaatggcgcacagatccatgcagggcttcta
ctgagcatcagtgacctggaagacagcgaaggcaacttctccttcccaatgcaaatcaaa
agccgcaacagtcagaatccaagcagttcggttgtatgggtgcatttaaatgtgacagtt
aaaatattactagaccttcgggggaatacgcacccttctgatgttgtactccccttaccc
aactggaagcctaaagaagaatctgataaaccattggataaaggggagatagtgacgcat
gtctacgagttgcacaatgctggtccaggcactgtcaacgtcaagttggttattgagagt
cctgaacgctatgaagaggacattttcctatatccactgcgtctgaagcctgatgaacaa
ctgaactgcacttctggcgaactcaactttttgcagctggacattgcagaaccaactaaa
acaccttcggacttcagtaagggaggtgatcatacactgaagaagagagaggcgttgggc
atggatcaagatggtgggaatacggggacggaaaacagtacaagcaccaaagatggaccc
aagcacaaacagcctattacactgagctgcggtgactcagcctgctggaaggttgagtgc
gtcatcgacaatctggataagggaaggagggtgacagtagcacttgagtccgtgctatgg
atttccagcttcatgaagagacctcagcagcccttcaacctgacttcccgaggttacttc
caggtgaccggtgtcccctacaggataaaacctaccactgttaaggacacagaaaagcaa
gctgtcacggtggttcagtgggtgactctggatggacagaaagagattcctatgtggtgg
ataatcctaggagttcttggggggctgcttatcctggcattgtttgtatttgtcatgtgg
aagctgggattcttcagaaggacacgacctccatcagatgatgagcaagatttaaccgga
gacaaataa

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