Rana temporaria (common frog): 120919600
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Entry
120919600 CDS
T07929
Name
(RefSeq) integrin alpha-IIb-like
KO
K06476
integrin alpha 2B
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04510
Focal adhesion
rtem04512
ECM-receptor interaction
rtem04810
Regulation of actin cytoskeleton
rtem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120919600
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120919600
09142 Cell motility
04820 Cytoskeleton in muscle cells
120919600
04810 Regulation of actin cytoskeleton
120919600
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120919600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtem04147
]
120919600
04515 Cell adhesion molecules [BR:
rtem04515
]
120919600
04090 CD molecules [BR:
rtem04090
]
120919600
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120919600
Exosome [BR:
rtem04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120919600
Cell adhesion molecules [BR:
rtem04515
]
Integrins
Integrin alpha subunits
120919600
CD molecules [BR:
rtem04090
]
Proteins
120919600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
120919600
NCBI-ProteinID:
XP_040187754
LinkDB
All DBs
Position
12:complement(31068292..31160070)
Genome browser
AA seq
1062 aa
AA seq
DB search
MSQRRNTHSKRREVSFCFLCSWIDRTMLLCLLLLTLPYTHSLNLDKLNPQNFSGPHGSYF
GFSFDFYQSADNRMNIVVGAPKLNAWVLNVRSGGGLFLCPWGSQTSSCSPIPFNDRSGDT
FLTSEGRMTISKSDQWLGATVRTWKSSIVACAPFQQYNFEDLSFSRTGHSGRTPTGACYL
TEDLQNFYEFAPCRQTKTERVSIWNSYFQDNRYCEIGFSTEISKEGVLLAGGPGGYSFEG
LYVTIPLSSILGNSAVIREFPDLYMSEENRRVSNAYKGFAVAYGEFTEDDSPEIVLGSPI
MLSRGMVEIYSGSKNMVTFKGEQTASYFGHSVAVTDINGDGLDDLLVGAPLFMERKSSGK
FLEVGQVYIYLQKRPRIVDRNPQILNGNRVYGHFGASIAPLGDLDQDGYNDVAVGSPFGG
QSGAGCVYIYKGEKSGLSTHPSQILESPQAAPSSFGFSLRGGQDIDQNGYPDLVVGAFEA
DTVYVFRAQPVVHLYTSLIFTPDSLNPDLKNCKQPSIGDVSCFTVRVCVRTSGKSLPNTL
SLSADIQLDSQKSRFLRRTLFTDSSQPSKKITMESQSNSQRTCTDIGAHLRGENEFKDKL
SPIVISVNVSLNTAPSSSILPPIIHGNTFLQEQIHILLDCGEDNICIPDLQLSAGWGMDP
LVIGEENLVQIHFDAENLGEGAYEAELHATLPPGAHYMQILGEVEEKILCTPRKANDTEL
VVCELGNPMKNGAQIHAGLLLSISDLEDSEGNFSFPMQIKSRNSQNPSSSVVWVHLNVTV
KILLDLRGNTHPSDVVLPLPNWKPKEESDKPLDKGEIVTHVYELHNAGPGTVNVKLVIES
PERYEEDIFLYPLRLKPDEQLNCTSGELNFLQLDIAEPTKTPSDFSKGGDHTLKKREALG
MDQDGGNTGTENSTSTKDGPKHKQPITLSCGDSACWKVECVIDNLDKGRRVTVALESVLW
ISSFMKRPQQPFNLTSRGYFQVTGVPYRIKPTTVKDTEKQAVTVVQWVTLDGQKEIPMWW
IILGVLGGLLILALFVFVMWKLGFFRRTRPPSDDEQDLTGDK
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagagaaggaatacccatagtaaaagaagagaagtcagtttctgctttctttgt
agctggattgatcgcaccatgctgctgtgtctgctgcttctcaccctcccctatacccac
tccctaaatctggataagctgaacccccaaaacttttctggaccccatggaagctacttt
ggattctcctttgacttctaccagtcagcagataacagaatgaacatagttgtgggggct
cccaaactgaacgcatgggttctgaatgtccgtagtggcggaggtctgttcttatgtcca
tgggggtcacagaccagcagctgctcccctataccgtttaatgatcgatcaggtgacacg
tttctaaccagcgaaggaagaatgaccatttctaagtctgatcagtggcttggagcaacc
gtcagaacctggaaatccagcattgtggcctgcgctccctttcagcaatataactttgag
gacctcagttttagccggactggacattcggggaggactccaacaggggcctgctacctt
accgaggacctgcaaaatttctacgaatttgctccttgtcgacaaaccaagacggagagg
gtttcgatatggaatagctattttcaagataaccgttactgtgagattggatttagcaca
gaaataagcaaggaaggtgttttgctagctggaggacctggcgggtattcctttgaagga
ctctacgttacaatccctctttccagtattctgggaaattctgcagtgataagggaattt
cctgacctctacatgtcggaggagaatcggcgtgtgtctaacgcctataaaggttttgca
gttgcttatggtgaatttacagaggatgactctccagagatagttcttggaagcccaatc
atgttaagcaggggcatggttgaaatctattcaggcagcaaaaatatggtgaccttcaaa
ggagaacagaccgcctcctattttggccattcagtagccgttacagacatcaacggagat
gggcttgatgatctactggtgggagctccccttttcatggagcgcaagtcgagtggaaag
ttcctggaagttgggcaagtctacatatatctgcagaagagacccaggattgtggacagg
aaccctcagatcctcaacggaaatcgtgtgtatggacattttggtgcatccattgctcct
ctaggagacctggatcaagatggatacaatgatgtggctgtaggctctccttttggaggt
cagtctggagctggctgtgtttacatttacaagggtgagaagtcagggctgtctacacat
ccatcacagatcttggagagcccccaagcagcaccatccagttttggcttttcattgaga
ggagggcaagacattgatcagaatggatatccagatctggtagttggagcttttgaagcg
gacacagtctatgtcttcagagcccaaccggtagttcatctctatacttcattgatattc
actccagattccttgaacccggacctgaagaactgtaaacagcccagtattggtgatgtc
agctgcttcacagtgcgcgtctgtgtccggacctcggggaaaagtctacccaacacactg
agcctgtctgctgacatccagctggacagccagaagagccgatttctccgcagaaccctc
ttcaccgattcatcgcagcccagcaaaaaaatcactatggagagccagagcaattcacag
cggacctgcaccgatatcggggcccatctgcggggtgaaaatgagtttaaggataagctg
agcccaatagttatcagtgtgaacgtcagtctgaacactgcaccatcttctagcatctta
ccacctataatacatgggaacaccttcctacaagagcagatacatatattactggattgt
ggagaagacaatatctgcattcctgacctgcagctgagtgctggctggggtatggatcca
cttgttattggagaggagaatcttgtacaaatccactttgatgcagaaaaccttggagaa
ggggcttacgaagcagaattgcacgctacgcttccccctggggctcattatatgcagatt
ttgggagaagttgaggagaagattttgtgcactccaagaaaagcgaatgacacagaactt
gtggtgtgtgagctgggtaaccccatgaagaatggcgcacagatccatgcagggcttcta
ctgagcatcagtgacctggaagacagcgaaggcaacttctccttcccaatgcaaatcaaa
agccgcaacagtcagaatccaagcagttcggttgtatgggtgcatttaaatgtgacagtt
aaaatattactagaccttcgggggaatacgcacccttctgatgttgtactccccttaccc
aactggaagcctaaagaagaatctgataaaccattggataaaggggagatagtgacgcat
gtctacgagttgcacaatgctggtccaggcactgtcaacgtcaagttggttattgagagt
cctgaacgctatgaagaggacattttcctatatccactgcgtctgaagcctgatgaacaa
ctgaactgcacttctggcgaactcaactttttgcagctggacattgcagaaccaactaaa
acaccttcggacttcagtaagggaggtgatcatacactgaagaagagagaggcgttgggc
atggatcaagatggtgggaatacggggacggaaaacagtacaagcaccaaagatggaccc
aagcacaaacagcctattacactgagctgcggtgactcagcctgctggaaggttgagtgc
gtcatcgacaatctggataagggaaggagggtgacagtagcacttgagtccgtgctatgg
atttccagcttcatgaagagacctcagcagcccttcaacctgacttcccgaggttacttc
caggtgaccggtgtcccctacaggataaaacctaccactgttaaggacacagaaaagcaa
gctgtcacggtggttcagtgggtgactctggatggacagaaagagattcctatgtggtgg
ataatcctaggagttcttggggggctgcttatcctggcattgtttgtatttgtcatgtgg
aagctgggattcttcagaaggacacgacctccatcagatgatgagcaagatttaaccgga
gacaaataa
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