Rana temporaria (common frog): 120919689
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Entry
120919689 CDS
T07929
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120919689 (LRBA)
Membrane trafficking [BR:
rtem04131
]
Endosome - Lysosome transport
Others
Others
120919689 (LRBA)
Endosome - Golgi transport
120919689 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120919689 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
WD40_WDHD1_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
120919689
NCBI-ProteinID:
XP_040187823
LinkDB
All DBs
Position
1:complement(523499751..524289729)
Genome browser
AA seq
2809 aa
AA seq
DB search
MSSQERQVQTTGDERRAPAEGPDPGGAMALGPGVPIRGIRMKFAVLTGLLEVGEVTTRDL
VDTVFNLLVGGQFDLEMNFIIQEGDSIFCMVELLDKCDVTCQAEIWSIFTAILKKSIRNL
LVCTEVGLVELVLNRIDKVDGMIADLLVDMLGVLASYSLTVRELKLFFSRLQGEKGQWPP
HAVKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMDPINNI
NVDTAKPYLYCFRTNKGLGYSAHFVGGCLIVTSIKSKGKGFQHCVKYDFKPQKWYMVSIV
HIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQMAAVY
LFSEALNAAQIFAIYQLGPSYKGTFKFKAESDLFLAEHHKLLLYDGKLSSSIAFTYNPRA
TDAQLCLESSPKDNTSIFIHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLFAQLDY
KQHGSDQIDTSVCSTLLSFILELLKNSLAMQEQMLSSKGFLVIGYSLEKSSKTHVTRTVL
DLSLAFSKYLSTLHNGVPLLKQLCDHILLNPAIWIHTPAKVQLALYTYMSTDFISTVNIY
NAVRRIGTVLLVMHTLKYYYWIVNPQDRSGIIPKGLDGLRPNQKEILSLRAFLLIFIKQL
VMKDYGVKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPSSMIPAFDQRNGLRVVY
KLLASKGEGIRVQALKVLGYFLKHLSPKRKVEVMQAHGLFSLLAERLMLEAKTITVTTYN
VLFEILIEQISTQVIHKQHPDPDSSVKIQNPLILKVIATLLRNSPQTQEVMEVRRMFLSD
MIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPQNVEEQKITEMVYAIFRILLYHAVKYE
WGGWRVWVDTISITHSKVTFEMHKESLAQAFRDYEGQVDDEIGPGPSSPIRTVSGNSRTF
ESRPQTPPLELTEAPLNIDNSLPGETVETEERDEGEDNNSHKENLKQKDGEDFAEVDLTE
NQNEVHVDEQATSMQEHTPSLVLPSNESEDIGVNCIVADTDGSTESLTKELDDGEIKSNE
YLNEGVQSSDLSLKVETSVQSESLEAQEKATYTETSSELESSQVVCANIPDTLNVHSSIV
STDTIPQESAIQEVITAPSLPTENVESSVPIEEGAVSSSTNGSNDIGDKKSSTMDAQSSD
KKIAKLDVSSIASDTENLELKASSNGESDQPLKVLHEEAVKQPAVHEMNRMTSSDSQRRD
SRSTMFRIPEFKWSIMHQRLLTDLLFSIETDIQMWRSHSTKTIMDFVNSSDNVIFVHNTI
HLLSQITDNMIMACGGILPLLSAATSTTHELENIEPTQGLSIETAITFLQRAISLVDVLI
FASSLGFTDIEAEKNMSSGGILRQCLRLVCAIAVRNCLECQQHLQLKSTGENMKNQKAIH
GLVGIAKSAAKSPVDILTGGISPVRDYDRLLQDMDINRLRAVVFRDVEDSKQAQFLALAV
VYFISVLMVSKYRDILEPQNERKQFHASTPSEHVENGSADAGTSDSLPSTMPAASEDLES
SISVRRRDSGIGEEPILVSGCNSETGAGTDPVSSGPDAISEVLHTLSSEVRKPNDTVGDG
NGEQSTTKNVNVKDILRSLVSSSAEESLVDPTLLPPTFLGALGDPAAEHSVQFRSFDRSV
VIAQKKTAPVAATVGPVPQAVSVVSSLEASQSAEADKDSSGSGSSNSKLPSVQAVASVPE
DSASHMSITERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSS
SVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRA
EEIHRHAEFESISAQYSADKREDEKMCDHLIRAAKYRDHVTATQLVQKIINILTDKHGAW
GSSSSNRPREFWRLDYWEDDLRRRRRFVRNPLGSTHREATLKAAIDHDREDDALVKGKQS
IRSQVVGSQNVESDSLLEVDDDTLSSLEEKDLENATGPVSLSTPAQLIAPSIVMKGTLSV
TSFELYFEVDEDDPNFKKIDPKILAYTEGVHGKWLFTEIRAVFSRRYLLQNTALEIFMAN
RVAVMFNFPDQSTVKKVVHCLPRVGIGTNFGLPQTRRISLATARQIFKASNMTQRWQHRE
ISNFEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPVGALNPK
RAAFFAERYESWEDDQVPKFHYGTHYSTASFVLSWLLRIEPFTTSFLNFQGGKFDHADRA
FSSVSRAWRNCQRDTSDIKELIPEFYYLPEMFVNMNNYNLGVMDDGTVVSDVELPPWAKS
PEEFVRISRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLSSIT
DPILREAVEAQIRSFGQTPSQLLIEPHPPRSSAMQVYLLLQSPLMFTDQAQHDVIMVLKF
PSNSPVTHVAANTQPGLASPAVITVTANRLFAVNKWHSLPAHQGAVQDQPYQLPVEIDPL
IANNTGMHRRQISDLLDQSIQVHSQCFVITADNRFILVCGFWDKSFRVYSTDTGKLTQVV
FGHWDVVTCLARSESYIGGDCYILSGSRDATLLLWYWNGKNNGIGDNPNNEFATPRAILT
GHDCEITCATVCAELGLVISGSKEGPCLIHSMNGDLLRTLEGPENCMRPKVIQASREGHC
VIYYERGLFCVFSVNGKLQATMEMEDNTRAILLSRDGQYLLTGGDSGVLMVWQVCDMKQL
FAYPGCDAGIRSMALSYDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8430 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccaggagagacaggtgcagacaacaggtgatgagaggagagcgccagcagag
ggccccgaccccgggggagccatggctctaggcccaggggtgcccatacgagggatccgc
atgaagttcgctgtgctcactggattgctggaggtcggggaagtcaccaccagagacctg
gtggacaccgtgttcaacctgcttgtagggggacagtttgatctcgagatgaatttcatc
attcaggaaggagacagcatcttctgcatggttgaattgttggacaaatgtgatgtcacc
tgccaagcagaaatctggagcatctttacagccattctgaagaagagtattcgcaatctt
ttggtctgcacagaagttggtttggttgaactggttttaaacagaattgacaaagttgac
ggcatgatagcagatctgctggtggacatgttgggggttttggcaagctatagtcttacc
gtccgtgaattaaaattgttttttagtaggctccaaggagaaaagggacaatggcctcca
catgcagtaaagctcttgtcagtgttaaagcacatgcctcagaaatatggtcctgatgcc
tttttcaacttccctggaaagagtgctgcagccattgccttacctccaattgctaaatgg
ccataccagaatggcttcacttttcacacttggctgagaatggatccaataaacaatata
aacgttgacacagcaaagccctatttgtattgtttcagaacaaacaaaggacttggttat
tctgcccattttgttggtggctgccttatcgtcacatccattaagtcaaagggaaaaggc
ttccagcattgtgtgaagtatgacttcaagccacagaagtggtacatggtatcaattgtc
catatctataatcgatggaaaaacagtgaattgcgctgttatgtgaatggagaactagct
tcgtatggcgagataacttggtttgtcaacacaagtgatacgtttgacaagtgtttcctt
gggtcttctgaaacagctgacgctaacagagtgttttgtgggcagatggctgctgtatac
ctttttagtgaagcactcaatgctgctcaaatttttgcaatttatcagctgggcccctca
tacaagggtacatttaagttcaaggcagagagtgacctttttcttgccgagcaccacaaa
ttgttgctgtatgatggcaagctgtccagttcaattgccttcacatataacccacgagct
acagatgctcagctttgcctggaatcatctcctaaagataacacctcaatatttattcac
tccccccatgccctgatgcttcaggatgtcaaggctgttctgacacactctattcaaagt
gcaatgcactccattggaggagtccaggttctcttccctctttttgctcagctggattac
aagcagcatggttctgatcaaattgacacatcagtctgttcaacacttttgtccttcatt
ttggagctgctgaaaaactctctcgctatgcaagaacagatgctgtcttcaaagggcttc
cttgtaataggatacagtcttgagaagtcttccaaaacacatgttaccagaacagtactt
gatctcagccttgcattttcaaaatacctgagcactttgcacaatggagtccccttactg
aaacagctctgtgaccacattcttctgaacccagcgatatggatccatacaccagcaaag
gtacaattggccttgtatacctacatgtctacggacttcatcagcacagttaatatctac
aatgcagtgcggcgaatcggcactgttctcctggtgatgcacacactaaagtactactac
tggattgttaacccccaggaccgaagtggaatcattcctaaagggttggatggacttcgg
cctaaccaaaaggagatcctttctctcagagcatttctgctcattttcatcaaacagttg
gtaatgaaggattatggcgtgaaagaagatgaactgcaggcaattctgaattatttgctc
acaattcatgaggatgacaacttgatggatgttttgcaattgcttgttgcactgatgtct
gagcacccaagctccatgattccagcttttgatcagagaaatggattaagggtggtttat
aaactgctggcatcaaagggtgaaggaatacgggttcaagctttgaaagtcctgggatac
tttctgaagcatttgtctccaaagaggaaagttgaagttatgcaggctcatggattattc
tctctcctggctgagaggctgatgctagaggcaaaaaccatcacagtcacaacatacaat
gtgttgtttgagattcttattgaacagattagcactcaggtgatacataagcaacatcct
gaccctgattcatcagtcaagatacaaaatcctttgatcttaaaagttatagccactcta
ctgcggaactctcctcaaactcaagaagtcatggaagtaagacggatgttcctgtcagac
atgataaagctttttaataacagcagagagaacagaaggagcttgctccagtgctctgtg
tggcaggagtggatgctgtcgctatgttactttaatccccaaaacgttgaggaacagaag
atcacagaaatggtctatgccatcttccgcatccttctttatcacgccgtgaagtatgaa
tggggtggatggcgtgtttgggtggatacaatctctatcacacattccaaggtcactttt
gaaatgcataaggaaagcttggctcaggcattcagagactacgaaggtcaagttgatgat
gaaataggacccggaccctcaagcccaatacgcaccgtttctggaaacagcagaacattt
gagagcaggcctcagactccacctttggaactcacagaggcgccattaaatatagataat
tcgctacctggtgaaactgtagaaacagaagagagagatgaaggggaagacaacaattct
cataaagaaaacctgaaacaaaaagatggtgaagattttgcagaagttgatctaacagaa
aatcaaaatgaggttcatgtagatgaacaagctactagtatgcaagagcatacacctagc
cttgtccttccttcaaatgagagtgaggatataggggttaattgtattgtggctgataca
gatggttctacagagagtttaacaaaagaactggatgatggggaaatcaaatcaaatgaa
tatttgaatgaaggagtgcagagttcagacttatcactaaaggttgagacttcagttcag
agtgaaagcttagaagcacaggagaaggccacctacactgaaactagtagtgaattagaa
agttcacaggtagtgtgcgctaatattcctgacacgttgaatgtacattccagcatagtt
tctacagacactataccacaggagagtgccattcaagaagtcattacagcaccatctttg
cccacggaaaatgttgaatcttcagtacctatagaggaaggtgcagtttctagcagtaca
aatggctcaaatgatattggggataaaaaaagcagcaccatggatgctcagagctctgat
aaaaaaattgccaagcttgatgtgtcaagtattgcttctgatactgaaaacttagaacta
aaagccagttcaaacggtgaatcggatcaacctctgaaagtgttacatgaggaagctgtt
aagcagccagcagtacatgagatgaaccgaatgacttcctctgacagccagagaagagat
tctagatctacaatgtttcgaattccggagtttaaatggtcaataatgcatcagcggcta
ctaacggaccttttattttccatagaaactgatattcaaatgtggcgaagtcactcaaca
aagacaataatggactttgtgaacagcagcgataatgttatttttgtacataatacaatc
caccttctatctcaaataacggacaacatgattatggcgtgtggtggtatattaccatta
ctttctgctgcaacctctactactcatgaactggaaaatattgaacctacccaaggtctt
tctatagaaacagctataacattccttcagagagcaataagtcttgtagatgtccttatt
tttgcaagttcattgggctttacagatattgaagctgaaaaaaatatgtcatctgggggc
atcttacggcagtgccttcgattagtttgtgcgattgctgttagaaattgtctggagtgt
cagcagcacttgcaattaaaatccacaggagaaaatatgaaaaaccagaaggcaattcat
ggcctggtgggaatagcaaagtctgctgcaaagagtccagttgacatactgacaggtgga
atttctcccgtccgagactatgacaggcttctacaggacatggatattaacagactgcga
gctgtggtcttcagagatgtggaggacagtaagcaggcccaatttctagcactggctgtt
gtctacttcatctctgtgctcatggtatctaaatatcgggacatcctggagcctcagaat
gagagaaagcagtttcatgccagcaccccttccgagcatgtggaaaatggcagtgctgat
gctggaacatcagattctctacccagtaccatgccagcagcttcagaggatttggagagc
tctatatctgtaagaagaagagactctggtattggtgaagaaccaattttggtgtccggt
tgtaattcagagacgggagctggaactgatcctgtgagttcaggaccagatgcaattagt
gaagtattgcataccctgtcttcggaagtcagaaaacctaatgatactgtaggtgatggg
aatggagaacagtccactaccaagaatgtgaatgtaaaagacattcttcggagcctggtg
agctcttcagctgaagaatcccttgttgacccaactttattaccccccacgttcctagga
gcacttggtgaccctgctgctgagcattcagtacagttccgatcatttgacaggagtgtc
gttatagcacagaagaaaactgctcctgttgcggctactgttgggcctgtccctcaagca
gtcagtgtggtatcatccttagaagcctctcagtctgcagaagctgacaaagactcatca
ggtagtggatcttctaattcaaaactgccatctgtccaagctgttgcatctgttccagaa
gattctgcatctcacatgagtattacagaaagactggagcatgctttggagaaggctgca
ccactgctgagggaaatctttgtggattttgcaccatttctgtctcgcactcttttgggt
agccacggccaagagctgcttatagaaggaacaagtttggtttgcatgaagtccagcagc
tctgtggtcgagttggtgatgcttttgtgctctcaggaatggcaaaattctattcagaag
aatgctggccttgcttttattgaactagttaatgaaggaagactgctgagccaaactatg
aaagaccacctggtaagggtagcaaacgaagctgaatttatcctgagtagacagcgagca
gaagaaatacacaggcatgcagagtttgagtcaatttctgcacagtattctgcagacaag
agagaagatgaaaagatgtgtgaccatttaataagggcagccaagtatagagatcatgtg
acagcaacccaactcgtacaaaaaattatcaatattctcacagataaacatggagcttgg
ggaagttcttcatcaaaccgtccccgggaattctggcgccttgactactgggaagatgac
ttgaggcgccgtcgacgatttgtacggaacccccttggttcaacacatcgtgaagcgaca
cttaaagctgccatagatcatgatcgagaagacgatgcccttgtgaaaggaaaacaatcc
atcaggagccaagttgtgggaagtcaaaacgtagagagtgatagccttttggaagtggat
gatgacactttgtcttcactggaggagaaggaccttgaaaacgcgacaggtccggtgagc
ctgagcactcctgctcaattaatagctccctccattgtgatgaagggtactctgtccgtc
acatccttcgagctttactttgaggtggatgaagatgatcccaactttaagaaaatcgat
ccaaagattttggcctacactgagggagtgcatggaaaatggctcttcacagaaatccgt
gccgtattctcaaggcgatatcttttgcagaacacagccctggaaatattcatggcaaac
agagttgcagtcatgttcaactttccggaccaatctacagtgaaaaaagtagttcactgc
ctccccagagttggaatcggcacgaattttgggcttcctcaaaccaggcgcatctcccta
gctactgctcggcagatatttaaagcatcaaatatgactcagcgttggcagcacagagaa
atttcaaactttgaatacttgatgtttctaaacacaatagctggacggacctacaatgac
ttaaatcagtatccagtatttccttgggtcatcacaaactatgaatcagaagagctggac
cttactcttccaagcaattttagagacttgtccaagcctgttggagcactgaacccaaag
cgagcagccttctttgcagagcgctatgaatcatgggaggatgatcaagttccaaagttt
cactatggcacccattactctactgctagctttgtactgagctggcttttaagaattgaa
ccgtttacaacatccttcctgaatttccaaggtggaaaatttgaccatgcagatagagca
ttttcttcagtttcaagggcatggcgtaactgtcagagagacacctccgatatcaaggag
ctcattcctgaattctactacctcccagagatgtttgtcaacatgaataactacaacctt
ggtgtaatggatgatggcacagttgtttctgatgttgaacttccaccatgggcaaagtct
cctgaagagtttgttcgtataagtagactggccttggaaagtgagtttgtgtcttgccag
ctccaccaatggattgatcttatatttggctacaagcagcaaggaccagaagctgttcga
gcactgaatgtgttctattaccttacctatgagggggctgtgaatctgagttccataaca
gatcctatcctgagagaggctgtggaggcccagatccggagttttggacagaccccatca
cagctgttaatagagccacatcctcccaggagctcagccatgcaggtgtatctcctcctg
cagagtccactgatgtttacagaccaagctcagcacgatgtcattatggttctgaagttt
ccctccaactctccggttactcacgttgctgcgaatactcagcctggattggccagtcct
gcagtcataactgtcacagctaacaggctgtttgctgtaaacaagtggcatagtcttcct
gcccatcaaggtgcagttcaggaccagccgtaccagttgccagtggagatcgatcctctc
atagcaaacaacacaggaatgcacaggcgacaaatctctgaccttttagaccaaagcatc
caggtgcattctcagtgttttgtcataacagcggacaaccggttcattttagtctgcggc
ttttgggacaaaagtttccgtgtttattctactgacacgggaaaactgactcaggtggtg
tttggacactgggatgttgtgacttgcctggctcgatcagagtcatatattggaggcgac
tgttacattctctcaggatcacgggatgctacgctgctgctgtggtactggaatggaaaa
aacaatggcattggagacaatccaaacaatgaatttgctactcctcgggcaatcctgact
ggtcatgactgtgaaatcacctgtgctacagtttgtgcagaacttggcttagtgatcagt
ggctccaaagaaggtccatgtctgatacattctatgaatggagaccttctgagaacgcta
gagggtccagaaaactgtatgcgaccaaaagttattcaggcctcaagagaagggcattgt
gttatatactatgaacgcggccttttctgtgtgttcagtgtaaatgggaaacttcaggcc
acaatggagatggaagacaatacacgggcaatcctgttgagtcgtgatggacagtacctt
ctcacaggaggggacagtggagttctcatggtatggcaagtgtgtgacatgaagcaacta
tttgcctatccaggctgtgatgctggcatccgatccatggccctgtcttatgaccaaagg
tgcattattactggcatggcatctggaagtattgtactattctacaatgactttaaccgc
tggcaccatgaatatcagacaagatactaa
DBGET
integrated database retrieval system
