Rana temporaria (common frog): 120919862
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Entry
120919862 CDS
T07929
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03420
Nucleotide excision repair
rtem04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120919862 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
120919862 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120919862 (ERCC8)
03400 DNA repair and recombination proteins [BR:
rtem03400
]
120919862 (ERCC8)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120919862 (ERCC8)
DNA repair and recombination proteins [BR:
rtem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
120919862 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
120919862
NCBI-ProteinID:
XP_040187837
LinkDB
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Position
1:526872790..526877827
Genome browser
AA seq
399 aa
AA seq
DB search
MLSFLWSRICGLDSPVRLTRAEATRRVLSLDLNKDRNVERIHENGINTLDIEPVEGRYML
SGGSDGIIVIYDLKNLTKTPSYTCKALCKVGKGLPDVHKFSVETVQWYPHDTGMFTSSSF
DKTLKIWDTNSLKLAEVFQFDGNVYSHHMSPLATKHSLIAVGTKNPKVQLCDLKSGSCSH
ILQGHRAEVLSVCWSPRYDNILATASADSRVKLWDVRKATGCLITLDQHNGEKSKSSSEA
ANTAHNGRVNGLCFTSDGLHLLTLGTDNRMRLWNSATGENTLVNYGKVLNNSRKCVKFTV
SVGCNPDFAFVPVDSTIVVYTIYTGEKISVLRGHYSDVDCCVFQPQYQDLYSGGKDCDVL
AWVPAMREPVPDDDPQSSRSQAHIHPAFHDAWSSSDEDS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttctgtggtcccggatctgtggcttagatagccctgttcgcctcacgcga
gctgaagccacacggagagtactaagtttggatttaaacaaggacaggaatgttgagcga
atacatgaaaatgggatcaacacacttgacatcgaacctgtggaaggaagatatatgcta
tctggtggatcagatggaattattgttatatacgaccttaaaaatttgactaaaacacct
tcgtatacatgcaaagcattgtgtaaggttggtaaaggcctccctgatgtacacaaattc
agtgttgaaaccgttcagtggtaccctcacgacactggaatgtttacatcaagctcattt
gataagactctgaagatatgggacacaaattcactaaagctagctgaagtcttccagttt
gatggtaatgtttacagccaccacatgtctccactagcaaccaagcatagcttaatagca
gttggaactaaaaatcctaaagttcagttatgtgacttaaaatctggctcttgttcacac
atattgcagggtcacagagctgaagtgttgtctgtctgctggtctccacgctatgacaat
attttagcaactgcaagtgccgacagtagagtaaaactgtgggatgtccgcaaagctaca
gggtgcctgatcacactggatcaacacaatggagagaaatcaaaatcttcttcagaagct
gctaacactgcccataatgggagagtgaatgggttatgctttaccagtgatgggctccat
ctattgactcttggcacagataacagaatgagactatggaacagtgctacaggggaaaat
actctggttaattatggcaaagttttaaataacagccgtaaatgtgttaagtttacagtt
tcagtgggctgcaatccagactttgcatttgttccagttgatagcacaatagttgtgtac
accatatataccggtgaaaaaataagtgttctgagaggacattatagtgatgtagactgc
tgtgtctttcaacctcaatatcaggatttgtatagtggaggcaaggactgtgatgttttg
gcttgggtacccgcaatgcgggagcctgttcctgatgatgaccctcaatcatctaggtcg
caagcccatattcaccctgcatttcatgatgcatggagtagcagtgatgaagattcttga
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