Rana temporaria (common frog): 120920216
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Entry
120920216 CDS
T07929
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04136
Autophagy - other
rtem04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120920216 (ATG2B)
04136 Autophagy - other
120920216 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120920216 (ATG2B)
03029 Mitochondrial biogenesis [BR:
rtem03029
]
120920216 (ATG2B)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
120920216 (ATG2B)
Mitochondrial biogenesis [BR:
rtem03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120920216 (ATG2B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
120920216
NCBI-ProteinID:
XP_040188103
LinkDB
All DBs
Position
13:24242614..24373747
Genome browser
AA seq
2071 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLTLDLYQGTGSLSQVPLDKWSLNEIL
ESADAPLEVTEGFIQTISLSVPWGSLLQDNCALEVKGLEMVFRPRPRPRSASEPMYWSSF
MTSSMQLARECLSQKLTDEQESSQPFEGLEKFAETIETVLRRVRVTFIDTVLRIERIPEN
SKTGTALEIRISKTLYSDETVDEQSGINVHRPSAFAHKVLELSGVSFFWDEFSASAKSSP
VCSTSKVETEPKLSPSWNPKPVFEPHPQFTRSVTEVTPSDPVQIASLVGRIELGLILKQN
EVLPGAKLDVDGRVDSFHVFLSPRQVHLLLDMLSAIAGPESSSRIGMSSKDRKSRPMQQE
DELRLQMELKRYLKREAMSEGLSAEHSFYETDTAKTPSSHDEEVFFSMADMDMSHSLSSL
PPLGDPPTVDLDLSLSSTYTTSPVGSPLGGGASTWSDYQEHLRMEEPLLRGASYKPNINQ
NTHRRTSLPARSASVDESRPELVFRLAVGSLSVSVLHIDPLPPTEATSNPNPLTPLSVGF
FSRIEALQPQTFTQNDFACLRNIFAEACTHDHLRFLGTQIKISHEQRQRSGARSFSTDVC
IGQTELLECLFPSDSQSVPPHYTELLKFDLENDVDSRSSPCIHLHYKHLETRGAQGSSGR
LGSVPQRSELQVQLTSASCELDITIVDRLNSLLQPQKLGTVEMMTSHLFTSYNKHISLHK
DFPEVLLDDSRSPVNTRTSVLVSAPSLHLAVRFPIPDLRSDQERGPWFKKSLQKEILHLR
FSDAEFKTEVLGGSSPEQLKLEFIFKELAGAFQEESDGPEIQFLRVVKKSNDSDGDMTTS
DNFDWPRIVLKINPVAMHSILERVAAEEDDDGHFHEDEEGNSHSLKDFCDFKRPEPSPFS
SRRVMFENEEMVMPGDTIEMTEFQEKAISNSHYVLELTLPSVYLMLPNKVFYEKLYNRIS
NDLLLWEPTAPSPVETFENLSYGIGLSVASQLINTFSKDSNSAFKSTLHYEDDSGSEEET
LQYEYILDSNYHCRRRKKLECQSKHSQSFLSVLVNINHGLVSVYTDVKYPDGQIMEDKHG
EFWLEFNTGSLFTVTKYEGFEDKHYLCLHASTLSLCHQSMLDGVVVSADLRLPSLPRPHW
LEPTIYPSGEDGASHRASSNGVGVDSLSMLTMAVKIQSDKSENNTKEFLVAVGLRGATLQ
HRVLPSEQTWHEQILQFLNITDEPVLGYNPPASITTFHVHLWSCALDYRPLYLPIRALLT
VETFSISCSVALDKSSSSLRIILDEAALHLSDKCNAVSVNLNRDYVQVLDMGLLELTILA
VKFGEESKPRFEMYCSSDVIHIRTCSDSCAALMNLIQYIANYGDLYPPPQTQTSPGPHKT
ARKNDPCAASNSRGPLLAEAEQQILRDLMIDAMEDMDIGQVSAPVKPQLNGISDGKFESQ
DPPCSDLFLFPDESGAVSEESSPTFMMAAPHLMGDAILDGPLESDDFCILYAPKTPALNK
NEEPSVRKLVEDSITIKENYFSLPDGKPDTNKASVHFPVPVMRYVVKEISLVWHLYGGKD
FGSSHPSTSPAKHYMSPHSSPSSTPTRRSNSLIRGGRGRNQDFLMEIQLTKVKFQHEVYP
QADPDTASALSEQLVSRQVFIVQDLEIRDRLATSQMNKFLHLYSSKEMPRKAHSNMLTIK
ALHVRPESSMSPQECCLRVTLMPLRLNIDQDALFFLKDFFASLSAEVEILVTPDPEVKRS
PGSDVTCSMPKHLNARNQVPVILVMGQNQPMKNGDVHFTEFSYGPETLKDDTSFNDQPVF
FREFRFTSEVPIRLDYHGKHVSMDQCTLTGILIGLAQLNNSELKLKRLCYRHGLLGVDKL
FSYAFNEWLTDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYCKDGRIVRGFQK
GAASFGTSTAMAALELTNRVVQTIQAAAETAYDMVSPGPSPIELKRAKRFSHHRLVHQPV
DLREGVAKAYAVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPAVVKPLIVAT
EATSNVLGGMRNQIRPDVREEESQKWRLEEG
NT seq
6216 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggcccttctccgagtccatcaagaagcgggcctgccggtacctcctgcagcgg
tatctgggtcacttcctgcaggagaagctcagtctggagcagctcactctagatttgtac
caaggcaccggctccttgtcacaagttccacttgataaatggagtcttaatgagatattg
gagtccgcagacgctcccctggaagtgacggaaggctttatacagaccatctccctgtct
gtcccctggggctccttactgcaggataactgtgcactggaggtgaaaggcctggagatg
gtgttcaggccaagacctcgaccacgttctgcttctgagccgatgtattggtcaagtttt
atgaccagcagtatgcagctggccagagagtgcctgagtcaaaagctgaccgatgaacag
gagtcctcacagccctttgaggggctagagaaatttgcagagaccatagaaactgtattg
agacgcgtccgagtgacgtttatcgacacagtgctgagaatagaacgcatacctgaaaac
tcaaaaacaggaactgccctggaaatacgaatcagcaagacgttgtattctgatgaaacg
gtggatgagcagtcgggaattaacgtgcacaggccctcggcattcgctcacaaagtcctg
gaactcagcggtgtgtctttcttctgggatgaattctcagcatctgcaaagtcctctcct
gtttgttcaacctccaaagtggaaacagagcctaaactttctcccagctggaatccaaag
cctgtctttgagcctcacccccagttcactagaagtgtaactgaggtcaccccctctgac
cctgtgcagatcgcttccctggtgggcagaattgagctgggtctgattctgaaacagaat
gaagtgcttcctggagcaaagctggatgtggatggacgcgtcgactctttccacgtcttc
ctctctccacggcaagttcacctcttgctggacatgttgtcagccattgctggaccagaa
tcctccagtcggataggaatgtccagcaaagatcggaagagccgccccatgcagcaagaa
gatgagctgcgtcttcagatggaactcaaacgctatttaaaaagagaagccatgtctgaa
ggactgtctgctgagcacagcttctatgagactgacacagcaaaaacaccgtccagccat
gatgaggaagtgttcttctcaatggcggatatggacatgtctcacagcctttcctctctc
cccccacttggtgatccaccgaccgtggatttagatttgtcactaagtagcacttacacc
acttctccggttggctccccccttggaggcggtgcatcgacatggagcgactatcaggag
catctgaggatggaggaaccacttctgcgaggggcctcatacaagcccaacataaaccaa
aacactcatagacgaacctcactaccggcccgttcagcctctgtggatgaatctagacca
gagctcgtgttcagactggccgtaggctcgttatctgtctccgtgctccatatagacccc
ctgccaccgacagaggccacgtcaaaccctaacccgctgaccccactgtcagttggcttc
ttcagccgcatagaggcgctacaaccgcagactttcacgcagaacgactttgcctgtcta
cgaaatatctttgcggaagcctgcactcatgatcacctcaggttcctagggactcaaata
aaaatctcccatgaacagcggcagaggtccggtgctcggagtttcagcactgacgtttgt
attgggcagactgagctcctagagtgccttttccccagcgattcccagtctgttcctcct
cactatacagagctcctaaaatttgatttggaaaatgatgtggacagcagatcatctcca
tgcattcacctgcattataagcatttagagaccagaggagctcagggcagttctggacga
cttggttcagtcccacagagatccgagcttcaggttcaattgacttccgcctcgtgtgag
ctggatattactattgtagatagactgaactccttgctccagccacagaaactgggcacc
gtggaaatgatgacgtcacatctgttcacctcgtacaacaaacacattagtttgcacaag
gactttccagaggtgctcttagatgattcccgttccccagtaaacactcggacctctgtg
ctagtgtctgctccatctctccaccttgcggtgcggttccccattcctgacctccgatcg
gaccaggagcggggtccttggttcaaaaaatctctgcagaaagagatccttcatctgagg
ttctctgatgctgaattcaagacagaggttctaggtggttcttccccagaacaattgaaa
ctggagtttatttttaaagagctagcaggtgccttccaggaagaaagtgatggcccagaa
atccagttcctaagggtggttaagaaaagcaatgattcagatggagacatgacaacatcc
gacaattttgattggccaaggattgtactaaaaatcaatcctgtagccatgcattctatt
ttggagcgagtagctgcagaggaggacgacgatgggcattttcacgaagatgaggaaggg
aattctcattcactaaaagatttctgcgacttcaaacgccccgagccctcgcctttctcc
tcccggagagtcatgtttgagaatgaagagatggtgatgcctggagacaccatagaaatg
acagagttccaggaaaaagcaatcagcaattcccactatgttcttgaactgaccttgccc
agtgtttatttgatgctaccaaacaaagtcttctatgagaaattatataacaggataagt
aatgacttgctgctctgggaacccactgctccttcaccagtggaaacttttgaaaatttg
tcctatggaataggcctgtctgtcgccagccagctgattaacaccttcagtaaagactcc
aacagtgcgtttaaatccactcttcattatgaagatgacagtggttcagaagaagagacc
ctgcagtatgaatatatcctggattcaaactatcactgtcgcagaagaaagaaactggag
tgtcaaagtaaacactcgcagagtttcctgtctgtcctggttaacattaaccatgggctg
gtctctgtgtatacagatgttaagtaccctgatgggcaaataatggaagataaacatggg
gagttctggctggaatttaatactggatccctctttactgtgaccaaatatgaaggattc
gaggacaaacactacttatgcctgcatgccagcactctaagtctctgtcaccaaagtatg
ttggatggtgttgttgtttctgctgatctcagacttcccagccttccccgacctcattgg
ttggagcccaccatctatccttctggagaggatggagccagtcaccgcgcatccagcaat
ggtgtgggagtggacagtctcagcatgctaactatggctgtaaaaatccagtctgataaa
tctgaaaacaatacaaaggaattccttgttgctgtggggctaagaggggcaacactacag
caccgtgtacttccatccgaacagacctggcatgagcagatattacaatttctaaacatt
actgatgagccagttttaggctacaaccccccagcctctataaccactttccatgttcac
ctttggagttgtgctcttgattacagacctctctacctgccgattagagccctgctcact
gtggagactttcagtatttcctgcagcgtagcgctggacaaatcttcatccagtttacgg
attatcctggatgaagctgcgctgcatttatcggacaagtgcaatgccgtgtctgtcaat
ttaaaccgggattatgtgcaagtcctggatatgggccttctagaactgaccatactggct
gtgaagtttggcgaagagtccaagccacgctttgagatgtattgttctagtgacgtgatc
catatcaggacatgctcagactcctgtgctgcgttaatgaaccttatacagtacatcgcc
aactacggggatctgtatcctccaccgcaaacacagacctcaccaggaccccacaaaacc
gccagaaagaatgacccctgtgcagcatccaactctcggggccctctgctggccgaggcc
gagcagcaaatactgcgcgatttaatgatcgatgccatggaggatatggacatcggtcaa
gtttctgcaccagtaaaaccccagctaaatggtatttcagatggcaaatttgaatctcag
gaccctccttgctccgacctattcctttttcctgatgaaagcggtgctgtatctgaagag
tccagtccaacattcatgatggctgctccccatcttatgggtgacgccattctagatggt
cccctcgagagtgatgacttctgtattttgtatgctccaaaaacacctgctttgaataag
aacgaggagccaagcgtgagaaagctggttgaagattccatcacaattaaagagaattac
ttcagtttaccggatgggaagccagacaccaataaggcatcggtacatttcccagttcct
gtaatgcgatatgtggttaaagagatctcgcttgtctggcacctgtacgggggcaaagat
tttggaagttctcatccttctacttccccggctaagcactatatgagtcctcacagctcc
ccttcaagtacacccaccagacgatccaacagcttaatcagaggaggccgcggaagaaac
caggacttcctaatggagatccagctaaccaaggtgaaattccagcatgaagtgtatccc
caggctgatccagacactgcctccgctttatcagaacagctggtgtcgcgtcaggttttc
atcgtccaggatttggagattagagaccgtttggctacatctcagatgaataaattcctt
catctttacagcagcaaggagatgccacggaaagcccattccaacatgttaacaatcaaa
gccttacatgttcgcccagaatcctcgatgtcgccgcaagaatgttgtctgcgtgtgacg
ctcatgccgcttcgcctcaacatcgaccaggatgccttgtttttcctaaaagattttttc
gcaagcctgtctgcagaagtggaaatattggtgaccccggatcctgaagtaaagagatca
ccgggctccgatgtcacatgcagtatgccaaaacatctgaacgcgcgcaatcaagttccg
gtgattttagtaatgggtcagaaccagccgatgaaaaacggtgacgtgcattttacagag
ttcagttacggcccggaaactttgaaggatgatacgtctttcaacgaccagcctgtattt
ttccgagaattccgattcacctctgaagttcccataagactggattaccatggaaaacat
gtgtcaatggatcagtgtacgttaactggaatattgatcggcctggcccagctgaacaac
tcggaactaaagctgaagaggctttgctaccggcatggtctattgggtgttgataaactt
ttctcatatgcctttaacgaatggctgacggacattaagaagaaccagttgccagggatt
ctgggaggagtggggccaatgcattctttggttcaacttgttcagggtcttaaggatttg
gtgtggctgcctattgagcaatactgcaaagatggccgtatcgtacggggcttccaaaaa
ggagctgcttcattcgggacgtctacggcaatggctgccctggaactcaccaatagagtt
gtccaaactattcaggctgcagcagagaccgcctatgacatggtgtcccccgggccgagt
cccatagagctgaaaagggcgaaaagattttctcatcacagattggtgcatcagcccgtc
gatctcagagaaggtgtggccaaagcctacgctgtggttaaagagggaataacggacact
gctcaaacaatctatgagacggctgcccgcgagcatgagaacagaggagtgacgggagca
gtaggaggagtcctgagacaaatcccacccgcggtggttaagcctctaatagtggcgaca
gaagccacttccaatgtcttgggcggaatgcgcaaccaaatccggccggatgttcgggag
gaagagtcacagaaatggcggttagaggaaggttag
DBGET
integrated database retrieval system
