Rana temporaria (common frog): 120920223
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Entry
120920223 CDS
T07929
Symbol
SCFD1
Name
(RefSeq) sec1 family domain-containing protein 1 isoform X1
KO
K19998
sec1 family domain-containing protein 1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120920223 (SCFD1)
Membrane trafficking [BR:
rtem04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
120920223 (SCFD1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120920223 (SCFD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
120920223
NCBI-ProteinID:
XP_040188114
LinkDB
All DBs
Position
13:65126060..65309332
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AA seq
632 aa
AA seq
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MASSIREKQTVALKRMLNFNVPLVKSSTGEPVWKVLIYDRFGQDIICPLLSVKELRDMGV
TLHLLLHSDRDAIPDVPAVYFVMPTEENVDRICQDLRTQLYESYYLNFISAISRSKLEDI
ASAALTANTVAQVSKVFDQYLNFITLEDDMFVLCNQNKELVSYRALNRPDITDTEMETIM
DTIVDSLFCFFVTLGAVPIIRCARGNAAEMVAVKLDKKLRENLRDARNSLFTGDNLGAGQ
FSFQRPLLVLVDRNIDLATTLHHTWTYQALVHDVLDFHLNRVNLEETQAAENSPSGARPK
KKNKKSYDLTVSDKFWQKHKGSPFPEVAESVQQELESYRNQEDEVKRLKTIMGLEGEDEG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDIYFEYEEKLMS
KASLDKSLLDIISDPDAGTPEDKMRLFLIYYITSAQPPSETDLDQYKKALEDAGCNLAPL
NYIKQWKAFAKMASGPTSYGLSATKSKGLLSRVMNTGSQFVMEGVKNLVLKQQNLPVTRV
LDSLMEVKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
IKTKQGKHILYGCTELFNASQFVKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctctatccgggaaaaacagacggtggctttaaaacgtatgttgaattttaat
gttcctcttgtaaagagcagcacgggcgagccagtatggaaggtcctcatttacgatcgt
tttggccaagatatcatctgtcctctgctctctgtgaaggaactgagagatatgggggtc
actttacacctacttctgcactcagatcgtgatgcaattccagatgttccagctgtgtat
tttgtgatgcctacagaagagaatgtggatagaatctgtcaggatctgaggacccagttg
tatgagtcctattacttgaacttcatctctgcaatctcccgcagtaaactggaagatata
gcaagtgcagcacttactgctaacacagtggctcaagtatcaaaggtctttgatcagtac
ctgaactttattactttggaggatgacatgtttgtgctttgcaaccaaaataaagagctt
gtttcatatagagcactgaatagacctgacatcactgacacagagatggaaaccataatg
gataccatcgttgacagcctcttctgcttctttgtcacattaggtgcggtgcctattata
agatgtgcaagaggcaatgctgcagagatggtggcagtgaaattggataagaaactacgt
gaaaatcttcgggatgccagaaatagcctgtttactggagacaatcttggagctggacaa
tttagcttccagagacctttattagttcttgtagacaggaacatagacctcgctaccact
cttcatcacacatggacataccaggcactggtccatgatgtcctggactttcatcttaac
agagtgaatctagaagagacccaagcagcagaaaatagcccctctggagcccgaccaaag
aagaagaacaaaaagtcttacgatctaacagtgtctgataagttctggcaaaaacataaa
ggcagcccttttcctgaagttgctgaatcagtgcagcaagagttggaatcttaccgcaat
caagaagatgaagttaaaagactcaaaactataatgggactggaaggggaagatgaaggt
gcaatcagcatgctgtctgacaatacagctaagcttacatctgctgtcagctcgctccct
gaactccttgaaaagaaaagacttatcgacctacacactaatgtagccactgccgtgctg
gaacatatcaaggctcgaaagttggatatatattttgaatatgaagagaagttgatgagc
aaggcatcgttggacaaatctcttctggacataatctctgacccagatgccggaactcca
gaagacaagatgcggttgttcttgatctattacatcacgtctgcacagcccccatcagag
actgacctggatcagtataagaaggcacttgaggatgcaggatgcaatttggcaccttta
aattacatcaaacaatggaaagcatttgcaaagatggcatcaggaccgacaagctatggt
ctttctgcaactaaatccaaagggctgctctccagagtcatgaatacggggtcacagttt
gtcatggagggggtgaaaaacttggttttaaagcagcagaacctgccagtcacgcgagtt
cttgatagcctaatggaggtgaaatccaacccggaaacagatgactacagatattttgat
cccaagatgttgcggggaaatgacagttctgtaccaaggaacaagaacccctttcaagag
gccattgtgtttgttgttggaggaggaaactatattgaatatcagaatttagtagactac
ataaagaccaaacaaggaaagcacatactttatggctgcacagagctttttaatgcttca
caatttgttaaacagttgtctcagcttggacagaagtaa
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