Rana temporaria (common frog): 120920262
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Entry
120920262 CDS
T07929
Symbol
SIX1
Name
(RefSeq) homeobox protein SIX1
KO
K15614
homeobox protein SIX1
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120920262 (SIX1)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120920262 (SIX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
120920262
NCBI-ProteinID:
XP_040188170
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All DBs
Position
13:35392137..35398238
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AA seq
284 aa
AA seq
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MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNTSGNKQNQLSPLDGGKSLMSSSDDEFSPPQSPDQNSVLLLQGNLSH
PGGSSYSLSALSASQGGHGLSSHQHQLQDSLLGPLTSSLVDLGS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgttgccttcctttggcttcacccaggagcaagtagcctgtgtgtgcgaggtg
ctgcagcaaggggggaacctggagaggctgggcaggtttctgtggtctctgccagcctgc
gatcacctccataagaacgagagcgtgctgaaagccaaggcggtggtggcatttcaccgg
ggcaacttccgagagctctacaagatcctggagagccaccagttctccccccacaaccac
cccaagctgcagcaactgtggctcaaggctcactacgtggaggcggagaagctgcgggga
agacccctgggggcagtgggcaagtaccgggtgaggaggaaattccccctgcccaggacc
atctgggacggagaggagaccagctattgcttcaaggagaaatccaggggggtgctgaga
gagtggtatgcccacaacccctacccttctccccgggagaaaagggagctggccgaggcc
actggactcaccactactcaggtcagcaactggttcaagaaccgacggcagagggacagg
gctgccgaggccaaggagagggaaaacacggaaaacaacaacacgtccggcaacaaacag
aaccagctctcccccttggatggaggcaaatctctcatgtccagctccgatgatgaattc
tccccaccacagagcccagaccagaactcagtcctcttactgcagggcaacctcagccac
cccgggggctcatcatactccctaagcgctttaagtgcctcccagggcggccacgggctc
agcagccaccagcaccagctccaagactctctcctgggacccctcacctccagcctggtg
gatctaggatcctaa
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