Rana temporaria (common frog): 120920270
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Entry
120920270 CDS
T07929
Symbol
NCSTN
Name
(RefSeq) nicastrin isoform X1
KO
K06171
nicastrin
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120920270 (NCSTN)
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GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
DUF4006
Motif
Other DBs
NCBI-GeneID:
120920270
NCBI-ProteinID:
XP_040188182
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Position
13:111969281..111989696
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AA seq
700 aa
AA seq
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MMAAAGAFLGFSLVLLTGVCRGNSVERKIYIPLNSTAPCVRLLNATHQIGCQSSRNGDTG
VIHVVEKEEDLPWVLETGPTPPYMVLLEGHLFNKDTLQKLKGSSRVSGIAVTYAKPPPEG
FSLDVPCPNDGFGLYTNEHGAQYAHCNGTVWNPPGTGFSYEDFSFPIFLLENENETEVIR
QCYRDHNVPGNDSVPHYPLCAMQLSAHMHAVTSSVTCMRRNSIQTSFSINPEAVCDSLAG
YNVWSAVKPINTSSVLLPEEQVVVSAARLDGRSFFWNLAPAAESTVSALVTQLAAAEALH
KVNDTQSLPRNIIFTFFQGEVFDYIGSSRMVYDMQKGRFPVRLNNIHSFVELSQVALRSN
SVLWIHSDPVSRTNETVDTEVQNLINTLKTASSGVNVTLQEVNQSQALPPASFQRFLKAR
NIPGVVLTDHRTAFNNKYYNSMFDLAETIKMDYPSGLSQDEAIEYVTETAQALSEVATLL
AKTLYQLAGGNDTVDIKADPRTVTRMLYGFLVRSNNSWFQSIMVPEWKDALEDKQPQFYV
TASSMGSKPTPNNPTRLLLSVLANLTGQAVNFTKEQCQNPDKAADAKKELYDYIWVQGPL
KENSTSREPYCVRSTKRRQFAESPAFELNEWGSTEYSTWTESRWKEIRARIFLVPSQQLE
IITLITGIAILALSFAATYFIQAKADILFTSTEDSGSVAY
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggccggtgccttcctggggttctctctggtgctgctgactggtgtgtgt
cgggggaactctgtggagaggaagatttatatcccactgaacagtacggctccctgtgtc
cgacttctcaacgccactcatcagatcggctgccagtcctccaggaatggtgacacggga
gtgatccacgtggtggagaaggaagaagatctgccctgggtactggagacgggccccacg
ccgccctacatggtgctgctggaaggccacttatttaacaaggacacactccagaaactg
aagggcagctcccgtgtgtctgggatagcggtcacctacgccaagccccctccggaaggc
ttctccttggatgtgccgtgccccaatgatggctttggtctttacaccaatgagcacggc
gcgcagtacgcccactgcaacggaaccgtatggaacccgccggggaccggcttctcctac
gaggacttcagctttcccatcttcctcctcgagaacgaaaatgagacggaggtcatcaga
cagtgttacagggatcacaacgtccccgggaacgacagcgtgccacactaccctctctgc
gccatgcagctctccgcccacatgcacgccgttaccagttctgtcacctgcatgaggcgc
aactccatccagacgtcgttcagtataaatcctgaagccgtgtgtgactcgcttgccggt
tacaatgtctggagtgccgtaaagcccatcaacacttcctcggtattgctcccggaggag
caggtggtggtgtccgccgccaggctggatggacgttcgttcttctggaacctggcgccg
gcggcagagagcaccgtctccgcactggtcacccagctggctgcggctgaagctctccat
aaagtcaacgacacgcagtccctgccccggaacatcatcttcaccttcttccagggggaa
gtgtttgactacattggaagctcgcggatggtgtacgacatgcagaaggggcggttccct
gtgcgcctcaacaacattcactcctttgttgaactcagtcaggtggcgctaagaagcaac
tccgtcctatggattcacagtgatcccgtctctcggactaatgagacggtggacaccgag
gttcagaatctgattaacaccctgaagacggcgagttctggggtcaacgtgactctgcag
gaggtcaaccagtcccaagcccttccgccagcatctttccagcgtttcctgaaggctcga
aatattccgggggtggtgctgaccgaccacaggacggccttcaacaataagtactataac
agcatgtttgacttggcggagacaatcaagatggactatcctagcggactgtcccaggac
gaagccatagagtatgttacggaaacagcccaggccctatcagaagttgccaccttgctg
gccaaaaccttataccaactggcaggaggaaacgacaccgtagacattaaggcggatccc
cgcacggtgacccggatgctgtatgggttcctagtgaggtccaataacagctggttccag
tccattatggtgccggaatggaaagacgctttggaggacaagcagcctcagttttacgtg
acggcctcttcgatgggcagcaagccgacgcccaacaatccgacccgcctcctcctgtcc
gtcctcgccaatctcaccggccaggcggtgaactttaccaaggagcagtgccagaacccg
gacaaggccgccgacgccaaaaaagagctctatgactatatctgggtccagggccccctt
aaagaaaactccacctcccgggagccgtattgcgtgagaagcaccaagcgcaggcagttt
gcggagtcgcccgccttcgaattgaacgaatggggctccacggaatattccacctggacg
gaaagccggtggaaggaaatacgagcgcgcatattcctcgtccccagtcagcagctggag
atcattacgctgatcacgggcattgccatccttgccctctccttcgctgccacctacttc
atccaagccaaggcggacatcttgttcacaagcacagaagactccggatccgtggcctac
tag
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