Rana temporaria (common frog): 120920381
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Entry
120920381 CDS
T07929
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04010
MAPK signaling pathway
rtem04517
IgSF CAM signaling
rtem04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120920381 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120920381 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120920381 (RAPGEF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
cNMP_binding
RA
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120920381
NCBI-ProteinID:
XP_040188366
LinkDB
All DBs
Position
1:534566298..534903274
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AA seq
1676 aa
AA seq
DB search
MASYVDNSFRQAVMKPPADRSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHITDSLHPQVTQVSSSHSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTVVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEFMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDLAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREALLPFTLLGGSDKGFGIFVDSVDPGSKAVEAGLKRGDQILEVNGQ
NFENIQLTKAMEILKNNTHLSITVKTNLFVFKELLARMLEEKRNSAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVSKKAKANTVGGRNKLKKILDKTRISILPQKPYKSYIELGAW
HSSKDLAAGFPGIHSDIGIGQSQDDSIVGLRQTKHMPATLPVSGTLSSSNPDLLQSHHRI
LDFNTTPDLPDQVLRVFKADQQSRYIMISKDTTAKEVVIQAIREFALTAVADAYSLCEVS
VTPEGVIKQRRLPDQLSKLADRIQLSGRYYLKNNMETETLCSDEDAQDLLRESQLSLLQL
STIEVATQLSMRNFELFRNIEPTEYIEDLFKLKSKIASTNLKNFEDVINQETFWVATEIL
KETNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAAVSRLRTTWEKLPSKYEKL
FQDLQDLFDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEK
LRMIAKEIRHVGRMASVNMDPALMFRTRKKKWRSLGSLSQGSTNAAVLDVAQTGGHKKRV
RRSSFLNAKKLYEDAQMARKVKQYLSDLDLEMDEENLQTLSVQCEPSTNTLPKTPCDKRS
GKPDTSPVAPRAATQQKQQQPVKVNQALLVPAVALYPSRKKVPVKDLPPFGINSPQALKK
ILSLSEEGSLERHKKAAEDTISNASSHLSSPPTSPQSSPRKGYSMPASGTVDNFSDSGHS
EISSRSSIVSNSSFDGMHLHDDRRQRHSVSIVETNLGVGRTDRRTVMEAEPCCMGHYSHL
MENRGLYASGTVLSSPSMEELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIPHQRS
WETLPFGHVHFDSTSDGAGYWPSGSHIDHLIFSDHSTKHGRHNQGREALEQAQSRASWAS
STGYWGEDSEGDTGTIKRRGGKDVALEAETSSLSSQTAEETKPLPVPTHIAVTAASSKGL
IVYCVTTARKEGRYREPPPTPPGYVGIPIADFAEGHPQLSRKPPDYNVALQRSRMMARRS
ESEGAPATSPPSHCQPSSKIVNKPQWHKPNEADPRLAIYQAQGVTKDDDDEQVSAV
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctatgtggataacagtttccgacaggctgtcatgaagcccccggctgacagg
agcccccaggatctggagatcgtttactcatacctccatggaatggaagcactatcaaat
cttcgggagcatcagctaagactcatgtgtgaaactgtccgttatgaaagacatgaagct
aatgaagtgttatactaccctgatgatattggtacctgctggtatatccttttatctgga
tctgtgtttatcaaggagtccatgtttctccctaggagcagctttggcaaacgatctgca
ggaagcttcaggcgtggctgtgaatgcattgtgttggaaccttccgaaatgattgtggtg
gactatatggatgaaaatgaagagtattttcagagacaagcatctcaccgacagtctcga
cggaggttcagaaagatcaaccagaaaggagagagacagaccatcatcgatactgtggat
ccttatcctgttggaaaacctccgctgccaagaggctaccacacagaatgcactaagcct
cagctacctgctgatttcaccaaactgcatatcacagacagcttacatccacaggtgacc
caagtgtcctccagtcattcaggatgtagcatcactagcgattctgggagcagcagcttg
tctgatatctaccaggccacagaaagtgagcccggagatatggacctgagtggactgcca
gagactgctgtagactcagaagatgacgatgatgaagaggatatcgagagagcatctgat
cccttaatgagccgagacattgttagagactgcctagaaaaagatcccattgaccggaca
gatgatgacattgaacaactcctggagttcatgcatcagttgcctgcctttgccaatatg
acgatgtctgtcagacgggaactgtgcgctgtcatggtgttcgctgtggtggaacgagca
gggactgtcgtactaaatgatggagaggaactcgattcctggtcagtcattttaaatggc
tcagtggaagtgacataccctgatgggagaacagaaatactttgcatgggaaacagcttt
ggagtctctccaaccatggagaaggaattcatgaagggagtgatgagaaccaaagtggat
gattgccagtttgtttgtatagctcagcaagattattgccgcatcctgaaccaggtggag
aaaaacatgcagaaagttgaagaggagggggaaattgtcatggtaaaagaacatcgagaa
cttgaccgcactggcaccagaaaaggccacatcgtcatcaagggaactgcggaacgtctc
acaatgcaccttgtggaagaacattctgtggttgacccaacgtatatagaggatttcctt
ctcacatataggacttttctgtcaagccccatggaagtggggaagaagttattggagtgg
ttcaatgaccctagcctcagggacaaggtgactcgagttgtattgctctgggttaacaat
catttcaacgactttgaaggtgacctggccatgactcgttttttagaggaatttgagaac
aacttggaacgcgagaaaatgggaggacacctgaggctgttaaatattgcatgtgctgcc
aaggcaaagagacgattgataacactaacaaagccatctcgagaagccctcttgcctttc
acccttctaggggggtcagacaagggatttggcatctttgttgacagcgtggatcctgga
agtaaagctgtggaggctggcttaaagagaggggatcagatattggaggtgaatggtcaa
aattttgaaaacattcagctaacgaaggctatggaaattctcaagaacaatactcacttg
tctatcactgtgaaaacaaatctatttgtcttcaaagagcttcttgcaagaatgttggaa
gaaaaaagaaatagtgccccacatttgcccaaaattggcgacatcaagaaggccagtcgt
tattctattccagatctcgcagttgatgttgaacaagttattggacttgaaaaagtgagc
aaaaaggccaaagccaacacagttggaggaagaaacaagctgaagaagattttggataaa
actcggatcagtattcttcctcagaaaccttacaaatcttatatagagctaggggcttgg
cacagcagcaaagatttagccgctggattcccaggaattcatagcgacattggaattggc
cagtctcaagatgacagcattgtcggtctgcgacagaccaagcacatgccagctacactc
cctgtcagcgggacactgtcatccagtaatccagatctgctgcaatctcaccaccgtatc
ttagactttaacaccactccagatctgcctgaccaggtgttgcgagtttttaaagctgat
cagcagagccgttacataatgataagcaaagacaccacggccaaggaagtggttatccag
gctatcagagagtttgcacttactgctgtggcggatgcctactctttatgtgaggtttct
gtcacccctgaaggtgttatcaagcagaggcgacttccagatcagctatcaaagctggca
gacagaatacaactgagtggcaggtattacctgaagaacaacatggaaacagaaaccttg
tgttcagatgaagatgcccaggacttgctgagagaaagccaactttccttgcttcagtta
agtacaattgaggtggctacgcagctctccatgaggaattttgagctttttaggaacatt
gagcccacagaatacattgaagatctcttcaaactgaagtcaaagattgcttctaccaac
ctcaagaactttgaagatgtaattaaccaagaaaccttctgggtggctacagaaatttta
aaggaaaccaaccagctgaaaaggatgaagatcatcaagcattttatcaagatagcactg
cactgtagagagtgcaagaacttcaactccatgtttgcaatcattagtggcctaaatctg
gctgcagtatctagactaagaacaacatgggaaaagctgcctagcaaatatgaaaaactt
tttcaagatcttcaagacctttttgacccgtcgaggaatatggcaaaatatcgtaatgtg
ctgaatagccagaacctacagccacctatcatcccattatttcctgttataaagaaagac
ctaacttttctacatgaaggaaatgactccaaagtggaggggcttgtgaactttgaaaaa
ctaagaatgattgctaaagaaatccgccacgttggtagaatggcttctgtgaacatggat
cctgccctaatgttccgaacaaggaagaagaagtggagaagtttggggtcacttagtcaa
gggagcaccaatgctgctgttctggatgtggcacaaacaggtggtcacaaaaaacgagta
cgtcgtagctcttttctaaatgccaagaaactgtatgaagatgcacagatggctcgcaaa
gtgaagcaatacctgtccgacctggatcttgaaatggatgaagagaatcttcagacgtta
tctgtccaatgcgagccttcaacaaatacattgccaaaaacgccttgtgacaagagatca
gggaaaccagacacatcaccagtagcaccgcgagcagcaactcagcagaaacagcaacag
ccagtgaaggtgaaccaagcattgctggtgccagctgtggctctctatccttccagaaag
aaggtgccagtcaaggatcttccgccttttggcatcaactcaccacaagcgttaaagaaa
attctttccttatcagaagaaggaagtttggagcgacacaagaaggcagcagaggacact
atatccaatgcgtcatcgcacctttcatctcctcccacctccccacagagctctccaaga
aaagggtattccatgccagcaagcggcactgtggataatttctctgattctgggcacagt
gagatctcttcccgttccagtatagtcagcaattcctcatttgatggcatgcacctccat
gatgataggcggcagcgacattcagtgagcattgtggagactaatcttggtgttggaagg
acagacagaagaactgtaatggaagccgagccttgctgtatggggcactattcacatttg
atggagaatagaggcttgtacgcgagtggaacggttttgtcctctcccagcatggaggaa
ttgtcccaagatcagggtgatagagcttcactggatgctgcagacagcggacgaggtagc
tggacctcttgttcaagtggctcccatgacaacatacaaactataccacatcagaggagt
tgggagactttgccatttggccatgttcattttgacagcacatcagatggggcaggttac
tggccctcgggaagtcatatagaccatttaatattttctgatcatagcacaaagcatggc
agacacaatcaaggaagagaagctttagaacaagcacagtccagagcaagctgggcatct
tccactggctactggggtgaggactctgagggggacactggcaccattaagagacgaggg
ggaaaagacgttgctcttgaagcagaaacaagcagcttatcctcacaaactgcagaagag
acaaagcctctacctgtgcccacacacatagctgtgacagcagcttcctcaaagggtctt
attgtgtattgtgttaccacagcacggaaagaaggccggtatcgagaaccaccaccaaca
ccgcctggatatgtaggaattcctatagcagattttgcagaaggacacccacaattatcc
agaaagccaccagattacaacgtagcactgcagcggtccaggatgatggctcggaggagt
gaaagtgaaggagcacctgcaacatccccaccatcacactgtcagccttctagcaagatc
gttaacaagccgcagtggcataaaccaaatgaggcggacccacgactagctatatatcag
gcacaaggggttacaaaagatgatgatgatgagcaagtatctgcggtgtga
DBGET
integrated database retrieval system
