Rana temporaria (common frog): 120920389
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Entry
120920389 CDS
T07929
Symbol
POGZ
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtem03036
]
120920389 (POGZ)
Chromosome and associated proteins [BR:
rtem03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120920389 (POGZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Tnp_Tc5
DDE_1
zf-C2H2_4
zf-C2H2_7th_ZNF462
zf-Di19
Motif
Other DBs
NCBI-GeneID:
120920389
NCBI-ProteinID:
XP_040188375
LinkDB
All DBs
Position
13:119156750..119192875
Genome browser
AA seq
1330 aa
AA seq
DB search
MDTDLFMECEEEELEPWQKISDVIEDSVVEDYGYMDKTSTVSVNIQPVTATLPIVAQTMG
TQYTTAATVTNTITQNTDNTKKTLLTLIANSSGSTPIMHSGSQPLYLTQNTTSGIGTMMT
QPMLRPMQVMQNANHSTNNSMTAQPIFITTQGFPVRNVRPVQNTMNSMNQVGIVLNVQQG
QTVRPITIVPAPGTQFMKQGMGVPQVFSQMTQVRPNTNVPVRPNTNTFTTVIPATLTIRS
PVPQSQAQVSKPISGTSTTMSPMRQITMQQPMQMLTIPQNQNNSSTNTKLVSIASFVSVK
GAGGTNDVVKFVNAMSGCQTTTQNSTQLIFSSSIGNNGTGPSLGTMQKSIQLEPIGVTVS
SPSVTPQDNLDRKHCPRCQTSFRVVEALRGHMCYCCPDLVDFSKKGNLESQMIPQGANST
SPDKPATATTPGGMASQSGKTQDSSADDSSQGKLIMLVDDFYYGRDVGQTYQMQGGAKMA
TTFRCPHCNKRLKNNIRFMNHMKHHVELDQQNGEVDGHTTCQHCYRQFSTPFQLQCHLEN
VHSSYESTTKCKICEWAFDSEPLFLQHMKDTHKPGEMPYVCQVCSYRSSIYAEVDTHFRL
NHEDTRYLLCVYCLKVFKNGNAFQQHFMRHQQKNVYHCNKCRLQFLFAKDKIEHKLQHHK
TFRKPRQLEGLKPGTKVTIRASRGPPRNTMTTPDPPILMPPPELSPQPIRHPVDTLPTLA
FPNRVLEEKQTCLECNFDVPDFHNHFPTYVHCSLCRYSTCCSRAYANHMINNHVPRKSPK
YRSLFKSFKTSDELVMACATCPFVTRIGDAMAKHLVFNPLHGYITVMPTNTSPDISWVRD
KATAANPPAEDKREPDPKVVLPASENSEFVDVEELEEMETEEPEEVEEPENENLDSGKEE
QISVKKLRVMLYALCSGIQLAAEHFHNSPSRIRWWLQKFQKEKPDASSEEKYLSTEAEDR
LAEWVLLQREQQQPVNEETLFQKATKIGRSLEGGFKISYEWAVGFMLRHKLSTHSKAAVV
NHLPRELEDSAQTFISFVQKQIHNQDLPLSMIAAVDEISLFLDLELLRGEELRECALQTV
GAGEPWCDIVLTILADGSLLPTLVCLRGNSTCSVDVPETIIYEAREDGLSEDEVMELWSS
RVWQKHVELPNKGMAVIDCHRSHMSDEVLALLSSTCTLPAVVPAGCSTKIQPLHVCIKSA
VTSFLHKKWAERARAKTSCSPETVLRLVISWMMEVLGVISDNPELVQQSFLVASVLPGHD
GATYSSKRNAKMQEELINLLEGELRLNEDEDTDSCNDSQPDEFPDPEALQHLFAEETDTE
SFYGFDDTDL
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatttgtttatggagtgtgaggaggaggagctggagccatggcagaagatc
agtgatgtgattgaagactcagtggtggaggattatggctatatggacaagacaagcaca
gtgtccgtcaacatccagccagtcacagcaacccttccaattgtcgctcagacaatgggc
acccaatacactacggccgccactgtgaccaacaccatcactcagaacacagacaacacc
aagaagacgttgctgactctcatcgccaatagcagtggttccacgccaatcatgcactcc
ggctcccagcctctctacctgacccagaataccacatctggtatcggcaccatgatgacc
cagcccatgctgcggcccatgcaagtcatgcagaacgccaaccactccaccaacaactcg
atgacggcacagcccatcttcatcacaacacagggttttccggttaggaacgtccggccg
gtgcagaacacgatgaactcgatgaatcaagtaggaatcgttctgaacgttcagcaaggg
cagacggtcaggcctatcaccatcgtaccagctccgggcactcagtttatgaagcaagga
atgggcgtcccccaggtcttctcacaaatgacccaagtccgaccgaataccaacgtcccc
gtgcgtcccaacaccaacactttcaccacggtcatcccggccaccctgacgataaggagc
ccggtgccgcagtctcaggcgcaggtcagcaagccgatctccggcacgtcgaccacgatg
tcgcccatgcggcagatcacgatgcagcagccgatgcagatgctgaccattccgcagaac
cagaacaattccagcaccaacaccaaactagtgagtattgccagttttgtgtcggtgaag
ggcgccggggggaccaacgatgtggtgaagtttgtcaacgccatgagcggctgccagacg
accacccagaattccacccagctcatcttctccagcagcatcggcaataacggcaccgga
cccagcttgggcaccatgcagaagagcatccagctagagcccatcggggtaacagtatcc
tccccatctgtgaccccgcaggacaatttggatagaaagcactgccccagatgtcagact
tccttccgagtcgtggaagcccttcgaggacatatgtgttactgctgtcctgacctcgtt
gacttctccaaaaagggcaacttggagtctcaaatgatcccgcaaggggccaactccacc
agcccagacaagcccgccaccgccactacccccgggggcatggcctcccaatccggcaag
acccaggacagctccgccgacgactcctcgcagggcaagctcatcatgttggtggacgac
ttctattacggccgggacgtcgggcagacttaccagatgcaaggcggggccaagatggcc
accaccttccgctgtccccactgcaacaagaggctgaagaacaacatcaggtttatgaat
cacatgaagcaccacgtggagctggaccagcagaacggagaggtggacgggcacaccaca
tgccagcactgctaccgccagttctccacccccttccagctgcagtgccacctggagaac
gtccacagctcctacgagtccaccactaagtgcaagatttgtgaatgggcctttgacagc
gaacctctgttcttacagcatatgaaggacacccacaaaccgggagagatgccctacgtg
tgccaggtgtgttcgtaccgctcctccatctacgccgaggtggacactcacttccggctc
aaccacgaagatacgcgctacctcctgtgcgtctactgcctgaaggtgttcaaaaacggc
aacgccttccagcaacacttcatgcgccatcagcagaagaacgtctatcactgtaacaaa
tgccgccttcagttcctgtttgcgaaggacaagattgaacataagctgcagcatcacaaa
accttccgcaagccgcgtcagctggaggggctgaagcccgggacgaaggtgaccatccga
gcctctcgaggaccccccaggaatactatgaccaccccagaccccccgattctgatgcca
ccgccagaattgtcgcctcagcctattcgtcatcctgtggacaccttgccaactttagcg
ttccccaaccgggttttggaggagaagcaaacctgtctggagtgcaacttcgatgtcccc
gatttccacaaccacttccccacctacgtacactgttctctctgccgctactccacctgc
tgctcccgcgcctacgccaatcacatgatcaacaaccacgttccccggaaaagtccgaag
tatcgttcactgtttaaaagtttcaaaaccagtgatgagctggtgatggcgtgcgcaacc
tgccccttcgtgacgcgaatcggtgacgccatggcgaaacatctggtcttcaacccgttg
cacggctacatcaccgtcatgcctacaaatacctcaccagacatctcatgggtccgggac
aaagccaccgctgccaatcctccggctgaagataaacgggaaccggaccccaaggtggtg
ttgccggcctctgagaactctgagtttgtggatgtggaggagctagaggagatggagact
gaggagccagaggaagtagaggagccggaaaacgaaaacctggacagcggcaaggaggag
cagatcagcgtcaagaagctgcgagtgatgctgtacgctctgtgtagcggcatccaactg
gcggccgagcatttccacaactcgccgagtcgcatccggtggtggctgcagaaatttcag
aaggagaagccggacgcctcgtccgaagagaagtatttgagcactgaggccgaggacaga
cttgcggaatgggtcctgctccagcgagagcaacagcagccggtcaacgaggagacgctc
ttccagaaggccaccaagatcggacgctcgctcgaaggaggctttaaaatctcctacgaa
tgggcggtggggttcatgctgcggcacaagctaagcacgcactccaaggctgccgtagta
aaccacctgcccagggaactggaggacagtgcccagactttcatcagctttgtacaaaag
cagatccacaaccaggacctcccgttgtccatgatcgccgccgttgacgaaatctcgctc
tttcttgacctggagctcctcaggggcgaagagcttagagagtgcgcgctgcagactgtg
ggcgctggcgagccttggtgcgacatcgtgcttactatcttggccgacggcagcctgctg
ccaacgttggtgtgccttcggggcaactcgacgtgctctgtagacgttccagaaacaatc
atatatgaagctagagaagatggcctgagcgaagatgaggtgatggaactctggtcctct
cgggtttggcagaaacacgtagaattgcccaacaaaggcatggcggtgatagactgtcac
aggtcgcacatgtctgacgaagtcctggccctcctgagctccacctgcacgctacccgcg
gtggtcccagccggttgcagcaccaagatccaaccactccatgtgtgcatcaagagcgcc
gtcaccagcttccttcacaagaagtgggcggaacgggctcgagccaaaaccagctgcagc
ccggagacggtgctacgactggtcatcagctggatgatggaggtcctgggcgtcatcagc
gacaatccagaactggtccagcagtccttcttggtggccagcgtccttcccggccacgac
ggggccacctactccagcaaacgcaacgccaagatgcaggaggagctcatcaaccttctg
gagggcgagctgaggctgaacgaggacgaagacaccgacagctgcaacgacagccagccc
gatgagttccccgaccccgaggccctccagcatctgttcgcggaagagaccgacactgag
tccttctacggcttcgatgatacagacctatag
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