Rana temporaria (common frog): 120920392
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Entry
120920392 CDS
T07929
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain containing-NOGO receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120920392
Membrane trafficking [BR:
rtem04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120920392
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
I-set
Ig_3
ig
LRR_9
LRR_LRWD1
V-set
LRR_Zer-1
Ig_2
Ig_6
Motif
Other DBs
NCBI-GeneID:
120920392
NCBI-ProteinID:
XP_040188385
LinkDB
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Position
13:118502268..118509921
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AA seq
634 aa
AA seq
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MKMGTSNFIQRLNVTLQPVVLLVTIGVLLRESCICCPPTCDCPSHDNATLCKHRLLSLIP
VEIPPSSHFLDLSYNRIRSVQHGTFSHLQDLQELDLSHNQLSRIEPGAFSGLPKMRILLM
HHNQLKLLSPGVFLGMPGLNWLDVRENQLVILLDQTFRGLQELRHLEVGDNPLLFVSPAA
FLGMPLLQRMGLEKTKLGRVPSLALASLPQLSELRLGGVTSTVLRDLSFSNMPSLRVLDI
DHWPSLANLGAHSLTSLNLTSLSLTNCNLRSVPEEALRSQLHLRRLDLSQNPISFLTEGC
FCDLKRLEELRLSGGRLSSIPSNAFHGLDHLRMLDLSDNPIQWVEENALPPPGVLETVLL
SGTTLSCDCRLCWLLHHKIHFGGRPPVCSAPDSLKGMVIPDHSELLCPEFFTCQPAKIIG
HGPREFRVQEGDRLTISCQSQGVPEPSTLWVLPKVPWPVDTKSTHPDGPDTELPQHALGS
SEEVTESVQLVKDSKKWRTTNTSQPSKPVEGRITILPEGSLQFLPVQTLDTGDYLCMATN
LAGNDSAWIHLEVTPFNSSTVYSPLPMVHSHLLAVITAGGILPFISSVTLCFIFIFLWSR
GRGNIKHTANIDYIPRTSRASSSPEDNKFTMKLI
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggggacaagcaactttatccagagactgaacgtgacactacagccggtggtc
ctcttggtgactattggggtcttgctcagagagtcatgcatctgctgtcctcctacatgc
gactgcccgtctcacgacaacgccaccctgtgcaaacaccgtcttctcagtttgattcca
gtggagatccccccctcttcccatttcttggatctaagttataaccggatcagatcagtt
cagcacgggaccttttcccacctgcaggatctccaggaactagacttgagccacaaccag
ctctcccgcatagaacccggagccttcagcggcctgccaaaaatgcgcatcctgttgatg
caccacaatcagctcaagcttctgtctccgggagtctttttgggaatgccgggacttaat
tggttagacgtcagggaaaaccagttggtcatcctgctggatcagactttccgtggcctg
caggagcttcgacacctggaggttggcgacaaccctctgttgttcgtatctcccgcagcc
ttcctggggatgcctcttctgcagagaatggggttggagaaaactaaactgggcagggta
ccttctctggctctggcttctctgccccaactttctgaactaagactgggtggagtgacc
agcacggttctacgggacctctcgttttcaaacatgccatcattgagagtactagatata
gaccattggccttctcttgcaaatcttggagcacacagcctgactagtctcaatcttacc
tccctatcgctaaccaactgcaacctaaggtctgtcccggaggaagcactgaggtctcag
ctccacctacgtaggttggacctctctcaaaaccccatttctttccttactgaagggtgt
ttttgtgatctgaaaaggttggaggagttacggttgtctggtggaagactaagctctata
ccttccaatgcttttcatggcctggaccacctccgtatgttagacctttcagacaatccg
attcaatgggtagaagaaaatgccctccctccccctggtgtcctggagactgtgttactt
tctgggaccactttgtcgtgcgactgccgtctttgttggctcctgcatcacaaaatccat
tttggaggaaggccgccagtgtgctcggcccctgactcgttgaaggggatggttatccca
gaccactcagagctgctatgcccagagttttttacctgccaaccagccaagataatagga
cacggtccacgtgagttcagggtgcaggagggcgacaggctgactatcagctgtcagagt
cagggtgtacctgaaccctctacgctgtgggtgctaccaaaagttccatggcccgtggac
acgaaatccacacaccctgatggcccagacacagaactccctcaacatgcactaggttct
tcagaggaggtaacagagtcagtgcagttagtaaaagactctaaaaaatggagaacaacc
aatacatcacaaccatcaaaaccggtggagggccgaatcaccattctaccagaaggttcc
ctccagtttctaccggtgcaaaccttggacacgggggattacctctgcatggctaccaac
ctggcagggaatgactctgcctggattcacctggaggtcacaccattcaacagcagcaca
gtctattctcccctccccatggtccacagtcatcttctggccgttatcacggccggggga
atccttcccttcatcagttccgtgacgctttgcttcatcttcatcttcctctggagccgc
ggacgcgggaatatcaaacacacggccaatatagattatattcccaggacttcaagggca
agttcatcaccagaggacaataaattcaccatgaaactcatctga
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