Rana temporaria (common frog): 120920488
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Entry
120920488 CDS
T07929
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03013
Nucleocytoplasmic transport
rtem03015
mRNA surveillance pathway
rtem03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120920488 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
120920488 (RBM8A)
03015 mRNA surveillance pathway
120920488 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtem03019
]
120920488 (RBM8A)
03041 Spliceosome [BR:
rtem03041
]
120920488 (RBM8A)
Messenger RNA biogenesis [BR:
rtem03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120920488 (RBM8A)
Spliceosome [BR:
rtem03041
]
Complex C
Other components
EJC/TREX
120920488 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
120920488
NCBI-ProteinID:
XP_040188541
LinkDB
All DBs
Position
13:117151068..117156099
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGAEDFAMDEDGDESIHKLKEKAKKRKGRGFGAEEGSRARVREDYESVEQD
GDEPGPQRSVEGWILFITGVHEEATEEDIHDKFADFGEIKNVHLNLDRRTGYLKGYALVE
YETYKEALAAMEGLNGQDLMGQPVSVDWGFVRGPPKGKRRSGRRRSRSPGERRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttctggacttacacgaggccggcgcggaggatttcgccatggatgaggac
ggtgatgaaagtattcacaagctgaaggagaaagccaagaagaggaaaggccgaggattc
ggtgcagaggaggggtcccgggcccgcgtccgagaggactacgaaagtgtggagcaggac
ggagacgagcccggccctcagagatccgtggagggttggatcctgtttatcaccggagtc
cacgaggaggccacagaagaggacatccacgataagttcgccgatttcggagagatcaaa
aacgttcatctaaatctggaccgcaggacgggatatctgaagggttacgccttggtggaa
tacgagacttacaaagaggctctggctgccatggaagggttgaacggtcaggacctcatg
gggcagccggtcagcgtggattggggatttgttcgtggaccaccaaagggaaagagacga
agtgggcgaaggaggagcagaagtccaggagaaaggagacggcgctaa
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