Rana temporaria (common frog): 120920607
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Entry
120920607 CDS
T07929
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem03040
Spliceosome
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120920607
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120920607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtem03041
]
120920607
Spliceosome [BR:
rtem03041
]
Common components
Common spliceosomal components
SR proteins
120920607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
120920607
NCBI-ProteinID:
XP_040188705
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All DBs
Position
13:41580416..41605737
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AA seq
262 aa
AA seq
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MEEKDMSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKSGFGFVEFEDHRDADDAVY
ELNGKELCSERVTIEHARNRRGRGGMMGGGGGGGRYPMRFGYRQSNSGGPRYGPPVRTEH
RIIVENLSSRVSWQDLKDFMRKAGEVTYVDAHRGNRNEGVVEFASYDDMRNAIDKLDGTE
LSGRKIKLTEDRKKHRSRSRSRSYSRSRSKSPKSRGSSRSVSRSRSPSRTPEKKYSQKSG
SGEPSQSSPKRQSRSSSRESRD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaagatatgagtggctgcagagtctttatagggaggcttagtcctcatgcc
cgtgagagagacgtggagaagtttttcaaaggatatggacgtatccgggagataaatctg
aagagtggatttggatttgtggagtttgaagatcacagagatgcagatgatgctgtgtat
gaactgaatggaaaagaactgtgcagtgaaagagtcacaattgaacatgccagaaatcgt
agaggaagaggaggcatgatgggtggtggaggtggtggtgggcggtaccctatgcgcttt
ggctatcgtcagtcaaacagtggtggacccaggtatggacccccagttcgtacagagcac
aggataatagtagagaatctttcttcccgcgtcagctggcaggatctgaaggattttatg
agaaaagcgggagaggtgacttatgttgatgcacacaggggtaaccgaaatgaaggggtt
gtggaatttgcatcctatgatgatatgaggaatgcaatagacaaattggatggtacggag
cttagtggtcgtaaaataaagcttactgaagaccgtaagaaacacagaagcagatccagg
tcaagaagctactccagatcccgaagcaagtcaccaaaatcccgtggctcttctcgttct
gtcagcagatcccgatctcccagtcgcacacctgaaaagaaatacagtcaaaaatctgga
agtggagaaccatcccagagctcccctaagcggcagtctcgttccagttcccgcgaaagc
cgtgattga
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