Rana temporaria (common frog): 120920676
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Entry
120920676 CDS
T07929
Symbol
PALS1
Name
(RefSeq) MAGUK p55 subfamily member 5 isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04519
Cadherin signaling
rtem04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120920676 (PALS1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120920676 (PALS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120920676 (PALS1)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
PDZ domain-containing proteins
MAGUK family proteins
120920676 (PALS1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
120920676
NCBI-ProteinID:
XP_040188816
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All DBs
Position
13:80694012..81034511
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AA seq
674 aa
AA seq
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MTTSHVNGHVAEDSDSEKHSAELSPEEPQKHREMAVDCPGDLGTRAMPIRRSAQLERIRQ
QQEDMRRRREEEGKKQDLDVNSSMRLKKLAQTFPKTGIDNPIFDTDEGLVLESPSRAVKV
LEVEDLLCSLKEIQHTLVDSQSQEDLFLLLQLVQNKDFQNAFRIHNAVAVHMNKASPPYP
LIPNAQELTQEVQHVLKSGHQKECQELNDLLSTPHIQALLLAHDKVAEQEMMPESISEDA
FYENIGQYGDEMVKLVRIEKAKDIPLGATVRNELDSVIISRIVKGGAAEKSGLLHEGDEI
LEINGIEIRGKDVNDVFELLAEMHGALSFVLIPSQQSKPPPARETVIHVKAHFDYDPTDD
PYVPCRELGLSFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQ
TIEEDKEPEKSGKLWCAKKNKKKRKKVLYNANKNDDYDNEEILTYEEMSLYHQPANRKRP
IVLIGPQNCGQNELRLRLLNSEADRFGTAVPHTSRSRRDNEVASRDYHFVSRQTFESDII
AGKFIEHGEFEKNLYGTSVDSVRQVINSGKICLLSLSTQALKSLRNSDLKPYIIFIAPPS
QERLRALLAKEGRNPKPEELRDIIEKAREMEQNNGHYFDTAIVNTDLDKAYQELLRIINK
LDTEPQWVPSSWLR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctcatgtgaatggtcatgtagcagaagattctgatagtgagaagcacagt
gcagagctttctccagaagagcctcagaagcacagagagatggcagtagattgccctggg
gacttgggtacacgggcaatgcccatacgtcgaagtgcacagcttgaacgaattcggcag
cagcaggaagacatgcgccgtagacgtgaggaagaaggaaagaaacaggatctggatgtt
aattcttcaatgagacttaagaaattggcacaaacatttcctaaaactggaatagataac
cctatttttgacactgatgaaggacttgttctggaaagtcccagtcgtgctgtaaaagta
ttggaagtggaagatctgctgtgttcattgaaagagatccaacacacgctggtagattca
cagagccaggaagatttatttttacttctacaactagtgcaaaataaagactttcagaat
gcatttaggattcacaatgctgttgctgtccacatgaacaaagctagcccaccatatcca
cttattccaaatgcccaggagttaacacaagaggtacagcatgttcttaagtcaggccat
cagaaagaatgtcaagaacttaatgatttactaagcacaccacacattcaggctctcctt
ttggcgcatgacaaagtggcagagcaggaaatgatgccggagtccatttctgaagatgcg
ttttatgaaaacattgggcaatatggagatgaaatggttaaacttgtaagaatagagaag
gcaaaagatataccactgggtgccacagtacggaatgagctggactctgtcatcatcagc
cgcatagtgaaaggaggggcagcagaaaagagtggacttctgcatgaaggagatgaaatt
ttagaaataaatggtattgaaattcgaggaaaagatgtcaatgatgtatttgagctactg
gctgaaatgcatggggcactatcttttgtactcattccaagtcagcagtcaaagcctcca
ccagcaagggaaactgtgatacatgtgaaagcacattttgactatgaccctactgatgac
ccatatgtgccatgccgagaactcggtctatcgttccagaaaggagatattcttcatatc
atcagccaggatgaccccaattggtggcaggcttacagggatggagatgaagataatcag
cctcttgcagggcttgtaccagggaaaagtttccaacagcagagggaagcgatgaagcag
acaatagaagaggataaggagcctgaaaaatcaggaaaactgtggtgtgcaaagaagaac
aaaaaaaagagaaaaaaagtgttatacaatgctaacaaaaatgacgattacgataatgag
gaaatcttaacatatgaagaaatgtccctttaccaccaaccagcgaacagaaagcgaccc
atagttcttataggaccacaaaattgtgggcaaaatgagctgcggttgcgcttgttgaac
agtgaggctgatcgttttggcactgctgtacctcatacttctcgaagtcggagagataat
gaagtggcaagtcgtgattatcactttgtttcgaggcagacatttgaatctgacatcatt
gctggaaaattcattgagcatggggaatttgagaaaaacctttatggcaccagtgttgat
tcagtgagacaagttattaattctggaaagatttgccttttgagtcttagtacacaggct
ttgaaatcattgcgtaattcagatttaaagccatatattatatttattgctccaccttcc
caggagagattgcgtgcattacttgctaaggaaggcagaaatccaaagccagaggaacta
agagacataattgaaaaagcaagagaaatggagcaaaataatgggcattactttgacaca
gccattgtaaatactgacctagacaaggcttatcaggaattacttcggataatcaataaa
ttggacacagagcctcagtgggttccatcttcctggttgcgatga
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