Rana temporaria (common frog): 120920732
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Entry
120920732 CDS
T07929
Symbol
TRIP11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtem04131
]
120920732 (TRIP11)
Membrane trafficking [BR:
rtem04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120920732 (TRIP11)
Retrieval pathways
120920732 (TRIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
ATG16
DUF7801
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
120920732
NCBI-ProteinID:
XP_040188909
LinkDB
All DBs
Position
13:complement(10067937..10137372)
Genome browser
AA seq
1912 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSLSGHISNFTKDMLLEGAEETDGDGEGQVPKVRDIE
SLQAMQRSENERLKKLCTELEEKLEAAELQVKQQSTDYRTRLQQREVEISHLKAKLNSLQ
DEVQKAQVSAQLSSVTLQAADSPAFMSSIPPPSSTFQGDDMDFSDVIWSQQEINNLSSEV
SRLQAEVTHWKHIAQVAKAQGTQSPDSKEVGVLQNTVQDLKLKLSRQIDEHHHELSVLQD
AHRQKLAEITRRHREELGEYEERIEELEEQFNSGGVDGTSHQSKMFELQKTVRSLEGEKA
DSAQKIQDLERQLRELNSAVSAADEEKMSLQQEKDSAENEKNHLAAECERLHAELIGLQT
LRESDGRTEVTSLEQEVLRLQEALIDAEKGMSRVTSTDQVLLGDTDRTTSSQEADVTSEQ
LRKDLDESQRRLEENIAEKESLTTELEELDRQNQEVMQHLLLMKEQLSKQREESETRVAQ
LNEELQQSRESQSNAVAEIRKLHEKLQSEEEKLRQAETVFSNVQAINRQLRVQMNELQEV
VRNLESRNSKTKKENQELQQSLKLVREELSVAQQESLSRHELQGDGESEKEINRLKLQLS
DIGQLKEDLENEICDLKMENEMLLSTQEQAKQQLQEVVASDRKEALEKQTVIEALRMEKS
RLETELNQLENRLHEQSQKYERTIRELSNAQKMDTSTLQIEHERIVKLNQEKDFQLAASK
RNVEQLEMDCEETKEMLTSTLEGQKQLTELIKEKESFVIELKEKNLELQRQLEEQTKTTK
ECDLLRQSIEEKERLLASMKEDNSHLKEEIERFKDQQSRSQPAVDPKTLDIITELEAEIT
QLTKVRNNHEEELKLQKKAVEKQNQNAAQLQKSLQEKIKEVNEVTLQHKEMVDTYEKLLS
EKDSEISSLHQTNELISSQLQNEHLIQTDSSVILHDTKAQTINNSDNGTEKHDLSKVEIE
KLVKGIKEKEMEIKILNEKNVNLTKQIDQLSKDEVGKLTQIIQQKDLEIQNLHARVSSVS
YMQDVVYLQQQLQAYAMEREQVLAVLSEKTRENSQLRTDYHKIMDVVAAKESALLKLQDE
NKRFSLSQEGSNQEMFRETIQNLSRIIREKDIEIDALSQKCQTLLTVLQASSSENGSDLG
AVNSNQFEELLQERDKLKQQVKKMQEWKQQVMTTVQNMQHESAHLQEELHKLQGQINKDS
DSSSKLQVDYNHLIHGYENNEKKLKDFSLELSNVQTSVGELNSTKERILGQLQVSNYDAS
PAETPLGSSPEQNSGDFAKIVQECEQLRIQIQERDTTIRTLQENNQRLSDSMVKTSEHGR
RTQEESTSELKQMKDKNELLQRAQKEKDILIKTKGDKLNSISENLKNKQNENELLKQAVT
NLKERALILEMDIGKLKEENEKVVAKEKEKETEFRALHETNMQFSMLLREKEFESSSMKE
KASALENLLKEKEQGKAGELNHLLNEVRSMQEKAILFQHERDQVMLALKQKQMETSALQN
EVQHLRDKEQRLKQELERLRNHLLEMEDSYTREAVAAGDREMELRKKLSALEEKLLSSST
AVENASHQATMQVESLQEQLHLVSHQRDEALMQLNMSQEQVKQYALSLTNLQIVLEQFQQ
EEKAMYSAELDKYRRQNAELRQKGERSEDRVVFLQEQLEEANTALESASRLTEQLDLKEE
QIEELKRQGDLKQEMLDDAQNKLMNLIHSTEGKVDKLLMRNLFVGHFHTPKNKRPEVLRL
MGTILGLQKNEVDELLVEETRGVTRWVTGWLGGSPNAKSVPNTPQRPSHVSVLNNSFSEL
FVKFLEVESLPKPAPLRMTMHDMPPSGTSSGTQSSSGSAALPGSGSSRRQDSNPFLAPRS
AAIPLISPGSLGGGTSGHLLMKPISDALPTFTPLPVSSDASAGAVLKDLLKQ
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttggctgggggggctgggctccggcctgggacaatccctggggcaggtcggg
ggaagcctgtcctccctctccggacatatctccaacttcaccaaagacatgttactggag
ggggctgaggagacagatggcgatggcgaggggcaggtacccaaggtcagagacattgaa
agcctccaggctatgcagaggtcagagaacgagaggctgaagaaactttgtacagagctg
gaggagaagctggaagcggctgaactacaagtgaagcagcaaagcaccgactacagaacc
cggctgcagcaaagagaggtggagataagtcatctgaaagccaagctgaactctctgcag
gatgaggtgcagaaggcgcaggtgtcggcgcagctctctagcgtcactcttcaagcagcc
gactctccggccttcatgtccagtattccgcctccttcctccaccttccagggggacgac
atggactttagtgatgtcatctggtctcagcaggaaattaacaacctctccagtgaagtg
tccaggctgcaggcagaggtgacccactggaagcacatagcccaggtagcaaaggctcag
ggcacacagagccccgactcgaaggaggttggagtgttacaaaacactgtccaggacttg
aagttaaagctaagtcgtcagatcgatgaacaccaccatgagctctccgtcttacaagat
gcccatcggcagaagctggcggagatcacacgcagacatcgcgaggagttgggtgaatat
gaagaaaggatcgaggagctggaggaacagtttaattcagggggtgtggatggcacttct
caccagtccaaaatgtttgaactccagaaaactgtccgctctctagaaggagagaaagcc
gacagcgctcagaagattcaggatttagagcgtcagctgagagaactgaattccgctgtc
tctgctgcggatgaagagaaaatgtctctgcagcaagagaaagattctgcagagaacgag
aagaatcatctggctgcggagtgtgagagactgcatgccgagttaattgggctacaaact
ctgcgcgagtctgacggcaggacagaagtcaccagtttagaacaagaggtcctgaggcta
caagaagcactaattgatgctgaaaaaggaatgagcagagtaacgtcaacagatcaggta
ctgctgggtgatacggatcgcactacttcctcccaggaggccgatgtcacaagtgagcag
ctaaggaaagatctagatgagagccagaggaggctggaagaaaacattgcagagaaggag
tcccttactacagaactagaggagctggacagacagaatcaggaggtcatgcagcacttg
ctgcttatgaaggagcagctatccaagcagagagaagaatcggagactcgtgtggcacag
ttgaatgaggagctacagcagtcaagagagagccagtcaaacgctgttgctgaaatcaga
aaattacatgaaaagttgcagtctgaagaggagaagctgaggcaagctgaaaccgtgttc
agcaatgtacaagcaatcaatcgtcagcttagagttcagatgaacgagttacaggaggtt
gtaagaaatttggaatccagaaattccaagactaagaaggaaaatcaagagcttcagcaa
agtctgaagcttgtgagagaagaacttagtgtggcccaacaggagtcactctcccgacac
gagctccaaggggacggtgaaagtgaaaaagagattaataggttgaagcttcaactttca
gatattgggcagttgaaagaagacttggagaatgagatttgtgacttgaagatggagaat
gagatgttactgtcaacccaagaacaagcaaaacaacaactgcaagaagttgtggcttct
gaccgcaaggaagctttggaaaaacagaccgtgatcgaggcccttagaatggagaagagc
cgcctagaaactgagctgaaccaacttgaaaatagacttcatgaacagtctcaaaaatat
gaacgaaccatccgtgaactttcgaatgcccaaaagatggacacctccactttacagatt
gagcacgagcggattgttaagctcaaccaagaaaaagactttcagttagcagcgagcaaa
cggaacgtagagcagcttgagatggactgcgaggagaccaaggagatgttgaccagcacc
ttagagggccagaaacaactcaccgaacttattaaggagaaggaaagttttgtcattgag
ctcaaggagaagaacttggagctgcaaaggcagcttgaggaacaaaccaaaacgacaaaa
gaatgtgatctcctaagacagagcatcgaagagaaggaaagacttctcgcttcaatgaag
gaagacaacagccatctgaaggaggaaattgagagattcaaggaccagcagagtcggtcc
cagccggcggtggacccaaaaacattagacatcatcacagaactggaggcagaaataaca
caactgactaaagtccggaataatcatgaagaagagctaaaacttcagaagaaggctgtc
gaaaagcaaaatcaaaatgctgcgcaacttcaaaaatctcttcaggagaaaatcaaagaa
gtcaatgaagtaactttacagcacaaggagatggtggacacgtatgagaaactactgtct
gaaaaagacagcgaaatctccagcctgcaccagaccaacgaactgatcagctcacagctg
caaaacgaacatcttatccagacagattcctctgttatactccacgataccaaggcacaa
acgatcaacaatagtgacaacggcacagagaaacatgatctgtctaaagtggagattgaa
aaattggtcaagggtatcaaagagaaggagatggagattaagattctcaatgaaaagaac
gttaacttgaccaaacaaattgaccagctgtctaaagacgaagtaggaaagctcactcag
atcatccaacagaaagacttagaaatacaaaatcttcacgctcgcgtgtcctcggtcagt
tacatgcaagatgtggtctatttacagcagcagctgcaagcctatgcaatggagagagag
caggttctggctgtcctaagtgagaagacaagggaaaatagtcaactccgaactgattac
cacaaaattatggatgtggtggctgccaaagagtcggcccttttgaaacttcaagatgaa
aacaagagattttcactcagccaagagggcagcaaccaggagatgtttagggagactatc
cagaatctctccagaataatcagagagaaagatattgagatagatgccttaagccagaaa
tgtcagaccctgttgactgttctccaggcctccagttcggagaatggcagcgatcttgga
gctgtcaatagtaatcagtttgaggaactgttgcaggaacgtgataaactcaagcagcaa
gtgaagaagatgcaagagtggaaacagcaggtgatgaccactgtccagaacatgcaacac
gaatctgctcacctccaggaggagcttcataagcttcaggggcagatcaacaaggacagc
gattctagctctaaattgcaagtagactacaaccacctcattcacggctatgaaaacaat
gagaagaaacttaaagattttagcctagagctgagtaacgttcaaaccagtgtcggtgaa
ctcaacagcacaaaagaacgtatacttggccaacttcaggtcagtaactatgacgcaagt
ccagctgagactcctttggggtcatctcctgaacagaacagtggcgattttgcgaagatc
gttcaagaatgtgaacaactgaggattcagattcaggagagagatactaccattcgaacc
cttcaagagaataaccagcgtttgtccgactctatggttaagacatcggagcatggtcgc
aggacccaggaggagtccacctcagagctaaagcagatgaaggacaaaaacgaactattg
cagagggctcaaaaggagaaggacattttgataaaaacaaagggagacaagttaaactca
atcagcgaaaacttgaagaacaaacagaatgagaacgagctgctgaagcaggcagtcacc
aacctcaaagagagggctcttattctggaaatggacatcgggaagctgaaggaggaaaat
gaaaaagtggtagccaaagaaaaggaaaaagaaacggagttccgagcattacacgagacc
aacatgcaattttccatgttgctccgagagaaggaattcgagtccagctcaatgaaggag
aaagcgtctgctctagaaaaccttcttaaagaaaaggaacagggaaaagccggtgaattg
aaccatctgttgaacgaagtgaggtccatgcaggagaaagcgattttgttccagcacgag
cgggaccaggttatgttggcactcaaacagaagcagatggaaaccagcgctcttcagaac
gaggtccagcatctacgagataaagaacagcgcctcaaacaagaactggagcggctgcgc
aatcacctgctggaaatggaagactcgtacacacgcgaagctgtggccgctggggatcgg
gagatggagctcagaaagaaactctcagccttagaagaaaagcttttatcctcctccaca
gcagtggaaaacgccagtcaccaggctacaatgcaggtggagtctctacaggagcagcta
catcttgtgtcccatcagagagatgaggctttgatgcaactcaatatgtctcaagagcaa
gtcaaacaatatgcgttgtcactgaccaacctgcagatcgtgctagagcagttccaacaa
gaggagaaggccatgtactctgcagagctggacaaatacaggagacaaaacgcagagcta
cgacagaagggggaaaggtcggaagatagagtggtgtttctgcaggaacaattagaagaa
gccaacactgcgctagaatcggcatcccgacttaccgaacagctggacctgaaagaggag
cagatagaggagctcaagagacaaggtgatctgaagcaggagatgctggatgatgctcag
aataagctcatgaatctgatccacagcaccgaggggaaggtggacaagctcttaatgcgg
aatctgtttgtcgggcacttccacaccccaaaaaacaagcgtcccgaggtcctgcgttta
atgggcaccatcctcggacttcagaaaaacgaggtggatgagcttctggtggaggaaacc
cgcggtgtgacgaggtgggtgacgggttggctcggaggatcaccaaacgccaagagtgtc
cccaacaccccgcagagaccgagtcacgtgtccgtgctgaacaattcattttcagagctg
tttgtcaagttcctggaggtagaatccctgccgaaacctgctccactcaggatgacgatg
cacgacatgccaccctcgggcacttccagcgggactcagagctccagcgggtctgcagcg
ctgccaggttctggatcaagtcgaaggcaagactcgaaccccttcttggctcctcgttca
gcagccatccccctcatctccccaggatccctgggagggggcacctcggggcatcttctc
atgaagcccatctcggacgccttgcccaccttcacccccctgcctgtttcctcggatgcc
agcgctggagcggtactgaaagacctcttgaagcaataa
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integrated database retrieval system
