Rana temporaria (common frog): 120920779
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Entry
120920779 CDS
T07929
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtem01009
]
120920779 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtem04121
]
120920779 (SH3RF1)
Enzymes [BR:
rtem01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120920779 (SH3RF1)
Protein phosphatases and associated proteins [BR:
rtem01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120920779 (SH3RF1)
Ubiquitin system [BR:
rtem04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120920779 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
zf-Nse
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
120920779
NCBI-ProteinID:
XP_040189001
LinkDB
All DBs
Position
1:complement(543711229..543956405)
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AA seq
881 aa
AA seq
DB search
MLISLQTSAEKSMDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRSELR
CPECRTLVECGVDELPSNILLVRLLDGIKQRPRKPGTGLHTGNGTNALRAQGNVTTNCGT
IDAQSNQGGPQRIQARSPPVRGVPQLPCAKALYNYEGKEPGDLKFNKGDIIVLRRQVDEN
WYHGEINGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDILTVI
RRVDENWAEGMLGDKIGIFPISYVEFNSAAKQLIELDKPSGVVDSGEGTSGTAHSSSSQK
HADAKKNTKKRHSFTSLTMSNKSSQSVQNRHSMEISPPVLISSSNPTAAARISELSGLSC
SAPSQVHISTAGLIVTPPPSSPVISGPTFTFPSDATYQAALGDLNPPILPPPPLTAAVIV
STTSGATSSTAGQRLATGPAEQVAHLRPSTRPSVYVAIYPYFPRKEDELELRKGEMFLVF
ERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRALTTGTQPKVVMATAGGTTQMVNMVAPCS
NAVPCQKIQGNGPEFSKTVNMNGVSTTVIPGTHIQTSPQAKVLMHMSGQMTVNQARNAVR
TAAAHNQERPTAAVTPIQAQNASSLIQGPSGNAHQGSPAQQMQPQLSSSAAYINAAMNLN
RSNVPMPANCSGSSGTSVEADGSWKCGSAATGSSSSPDNVSAPSSSSAANKQDKDSKKEK
KGLLKLLSGASTKRKPRASPPHSPTQELEQTTPEATLEGAVGPDILTNTVRTASGTVDCE
ALNALAQENRKTNLVDPNVPIAPPPRQPCSSLGPVLNDSRPVVCERYRVVVSYPPQSEAE
LELKEGDIVFVHKKREDGWYKGTLQRNGKTGLFPGSFVDNI
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctccttgcagaccagcgctgagaaaagcatggatgaatccgccttgttggac
ctcttagagtgcccggtatgtctggagagactcgatgcctcggctaaggtcttgccatgt
caacacacgttctgcaaacgttgcctgttggggatcgtcagctcccggagcgagctgcgc
tgccctgagtgtaggacgctggtggagtgtggggtggatgaacttcccagcaatatactc
ctggtccgactgctggatggaatcaaacagaggccgaggaaacctgggacagggctacac
actgggaatggcacaaatgcattaagagcacaaggcaatgtaactactaactgcggcaca
attgatgcacaaagtaatcaagggggacctcagaggatacaagcacggagccctcctgtc
aggggtgtacctcagttaccgtgtgccaaagctttgtacaactatgaagggaaagagccc
ggggatctgaagtttaacaagggtgacatcattgtgcttcgccggcaagttgatgaaaat
tggtaccacggggaaatcaatggggtccatggcttcttcccaacgaactttgtgcagatt
atcaagcctttacctcaacctccgcctcaatgcaaagcactttatgactttgaagttaaa
gacaaggaagccgacaaggactgcttgcccttttcaaaggatgacattctcacggtgatc
cgcagagtggatgaaaactgggccgaaggaatgctgggagacaaaatcggaatattcccc
atttcctatgtggagtttaattcagcggccaagcagctcatagagttggacaagccctca
ggagtagtggactctggggaaggaacatctggaacagcacatagcagctcttcccaaaag
cacgcagatgccaagaagaacaccaaaaagcgtcattcgttcacctcgctcaccatgtcc
aacaagtcatcgcagtctgtgcagaaccgccattccatggagatcagccccccagtgctc
atcagctccagcaatcccacagctgcggccaggataagcgagctgtctggcctgtcttgt
agcgcaccttctcaggtccatatcagtactgcagggcttattgtgactccgcccccgagc
agccctgtaataagtggccctacatttacatttccatcggatgccacctatcaagctgct
ttaggagatctgaatccacctattcttcctcctccaccactgactgctgctgttattgtc
tctacaacctctggggcaacatcttctactgctgggcagagattggctactggtcctgct
gaacaagttgcacaccttaggccatccacccgaccaagcgtgtatgttgccatatatccc
tatttcccacgtaaggaggatgaactggagcttcggaaaggtgaaatgtttttggtattt
gaacgctgtcaggatggctggtttaaaggaacttccatgcataccagtaagattggcgtg
ttcccagggaactatgttgcaccagtcaccagggctttaacaactggaacacagcccaag
gttgtcatggcaacagcaggtggaaccacacagatggtaaacatggtagcaccatgttca
aatgcagtaccttgccagaagatacaaggaaatggaccagaatttagcaaaactgttaat
atgaatggtgtctctacaacagtcattccgggtacccatatccagaccagccctcaagct
aaggttttgatgcatatgagtggccagatgacagtaaaccaagcccggaatgctgtccgg
acagccgctgcccataatcaggagcgaccgacagctgcagttactcccatccaggctcaa
aatgcctcttcccttatccaaggaccatctggcaatgcccaccaaggctctcctgcccaa
caaatgcagccacagctttcaagttcagctgcatacatcaatgctgccatgaatctcaac
agatcaaatgtgccaatgcctgccaactgtagcggcagcagcgggacctctgtggaagca
gatggcagttggaaatgtggctctgcagccactggaagctcttcatctcctgataatgtt
tcagcaccttcaagttcttctgctgctaataagcaagacaaggacagcaagaaagagaaa
aagggtttgctcaagttgttgtcgggtgcatccacaaaaagaaagcctcgagcatctcca
cctcactctcctacacaagaactggaacagactacaccagaggccactttagaaggagca
gttggtcctgacattctaaccaatactgtccgaactgcttctggaactgttgattgtgaa
gctctcaatgcactggcacaggagaatcgcaagactaatttggtggatcctaatgttcct
atagcacctccaccgaggcagccttgctcctcactgggccctgtactaaatgactctaga
cctgtggtctgtgaaagatacagagtggtggtgtcttaccctccccagagtgaggccgag
cttgagctcaaggaaggggacattgtatttgtgcacaagaaacgtgaagacggctggtat
aaaggcacactacagcgaaacggaaaaaccggcttattccctggcagctttgttgacaat
atttaa
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