Rana temporaria (common frog): 120920807
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Entry
120920807 CDS
T07929
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120920807 (NPAS3)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120920807 (NPAS3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
DUF7510
Motif
Other DBs
NCBI-GeneID:
120920807
NCBI-ProteinID:
XP_040189068
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All DBs
Position
13:66958623..67547826
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AA seq
962 aa
AA seq
DB search
MIRIFPDFSVQVTAAPGAGGAPPEPGAARSGGTNGNHPHNVPGVSSYQQRGASRPISACT
VPCPPDLNLSLQALRKEKSRDAARSRRGKENFEFYELAKLLPLPAAITSQLDKASIIRLT
ISYLKMRDFANQGDPPWNLRMEGPPPNTSVKVIGSQRRRSPSSVASDVFDTHLGSHILQS
LDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSMFDYVHPGDHVETAEQLGMKLPPG
RGLLSQSANDDGASSASSSSQSETPEPVESSSPGIIPQDNSLERSFFIRMKSTLTKRGVH
IKSSGYKVIHVTGRLRLRVSLSHGRTGPGQVMGLVVVAHALPPPTINEVRIDCHMFVTRV
NMDLNIIYCENRVSDYMDLNAVDLMGKRCYHFIHAEDVEGIRHSHLDLLNKGQCVTKYYR
WMQKNGGYIWVQSCATIAINAKNANERNIIWVNYILSLLEYKDIPMDIAQLPHLPEKTSE
SSETSDSDSDSKDNSEDNDNPKSDGKGNLSEQSEDPEPDHKQPGPHSDPDMNCDDEANSS
SDACSEESEESEDCEVRKTEEEMEQGGLSAIGAIGTLGALGPMHIKVERYTESETDMRRP
ESLSSDSAKDSESAEEEEDDEEDTGVRVTGVLSRHQRRKRRRRKGLGPCGGRRRRLSGGS
SPGGLETTLGDPPRLLPSTPPPTGNCSSSVLKIKTEMSEPINFDNDSSIWNFPPNREISR
NESPYSMTKPPTGGEHFSPSPSSTAAAPPALHVSIPDSVLTPPGGAEGAGRSKAQYSGSS
GGLGPVNSDPLSPPLSASPREKPPQTSGPSNSLLYAGELEALQRLQAGNVVLPLVHRVAG
TLAATGSSGQRVYTTGTIRYAPAEVTLAMQGNLLPNAHPVNFVDVNGPSFGLDPKTPMEM
LYHHVHRLNMSGPFGGAVSGAGLTQVPAASVFTTAEGIFSSLPFPVYSNGIHAAQTLERK
ED
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatcttccccgacttcagtgtgcaggtgacggcggctccgggggctggcggg
gctcctcccgagcccggggcggccaggagcgggggaaccaacgggaaccacccgcacaat
gtgcccggggtcagctcgtaccagcagcggggagcctccaggcctatcagcgcatgtacc
gtcccctgtcctccagacctcaacctaagtttacaagccctgcggaaagaaaagtccagg
gacgctgcccgctcccggcgtggaaaggagaactttgagttttatgagcttgccaaacta
ctccctttgcccgcggccatcacaagtcagctagacaaggcatccatcatccgcctgacc
atcagctacttaaagatgagagactttgccaaccaaggagacccaccatggaatctacgt
atggaaggcccaccgcccaacacttcagtcaaagttataggatcccagaggaggaggagt
cccagttctgtggcctctgacgtctttgacactcatctaggaagtcatatcttacagtct
ctggacggctttgtatttgcactaaatcaagaaggaaaatttttgtacatttcggagact
gtgtccatctaccttggcttgtctcaggtggagctgactggaagcagcatgtttgattat
gttcacccaggggaccacgtagagacggcggagcaactcggcatgaaacttccaccaggc
cgtggacttctctcgcagagtgccaatgatgatggtgccagttcagcatcttcatcctca
cagtcagagactccagagccagtggagtcctccagccctggaattatccctcaggacaac
tctttagaaaggtctttcttcattcggatgaaatctacactgactaaaagaggtgtacat
ataaaatcctcggggtacaaggtgattcatgtaactggacgtctgcgtctccgtgtgtct
ttgtctcatgggcgtactgggccaggacaagtgatgggtttagtagttgtggctcatgcc
ctccctcccccaaccatcaatgaagtccgcattgactgccacatgtttgtaacacgtgtc
aacatggacctcaatattatatactgtgaaaatagagtcagtgattacatggacctcaat
gctgtggatctgatgggtaaaagatgctatcactttatccatgccgaagatgtagaagga
atcaggcacagccacctggacttgttgaacaagggccagtgtgtgaccaagtattatcgg
tggatgcagaagaatggtggctacatttgggtccagtcctgtgccaccatcgcaatcaat
gccaagaatgccaatgagaggaacatcatctgggtcaactatatcctcagtttactagaa
tacaaggacattccgatggatattgctcagctaccacatttgcctgaaaagacatcggaa
tcctctgagacttcggactcagattcagactccaaggataattcagaggataatgataat
ccgaagtcagatggaaaagggaacctttctgagcagagtgaagacccagagcctgatcac
aagcaaccaggtccccactctgacccagacatgaactgtgatgatgaggccaacagctca
agtgatgcttgcagtgaagaaagtgaagaaagcgaagactgtgaagtgaggaaaacagaa
gaggagatggagcaaggagggttgagtgcaataggggctattggaactctaggagcattg
ggccctatgcacattaaagtagaacgttacacagagagtgaaacggacatgcgtagacct
gaatctttgagctctgatagcgccaaagactctgagagtgcagaagaggaggaggatgac
gaggaagacacaggtgtgcgtgttactggtgttctaagcagacatcagcgaaggaaaagg
agaagaagaaagggtttgggaccatgtggaggccgtaggagacgtctctctggaggatcc
agtcctggtgggctagagaccacattgggggatccaccaagattgctcccttccacccct
ccgccaactggaaactgttcttcatctgtgctaaagatcaagacggaaatgtcagagcct
ataaactttgataatgacagcagtatttggaacttcccacctaatcgagagatctcacga
aatgaatccccttatagtatgaccaagcctcccacagggggcgaacatttctccccttcc
ccatcttccacagctgctgcccctccagccctccatgtttccataccagactctgttctc
acacccccaggtggggctgagggagctggacgcagcaaagcgcaatactctggatcctca
gggggcttaggccctgtcaactctgaccctctttcacctccactgtctgcctctcctcga
gaaaaacctccccaaacaagtggcccatcaaactcccttctgtacgcaggtgagcttgaa
gcactacagaggcttcaggcaggcaacgtggtccttcctcttgtgcatcgcgtggcagga
acccttgcagccacaggaagcagtggacagagggtatatactacaggcaccattcgctat
gccccagctgaggtgactctggccatgcaaggcaacctgctgcccaatgctcatcctgtg
aactttgttgatgtaaatggcccaagttttggtttggaccccaagaccccaatggagatg
ctgtaccatcatgtccaccgacttaacatgtctggcccatttggaggagctgtgtcaggt
gctggtcttacccaggtgcctgctgccagtgtcttcactacagctgaggggatattctcc
tctctcccatttccagtgtacagcaatggcatccatgcagcacagactctagaacgtaaa
gaggactga
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