Rana temporaria (common frog): 120921092
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Entry
120921092 CDS
T07929
Symbol
TTC6
Name
(RefSeq) tetratricopeptide repeat protein 6 isoform X1
KO
K24929
tetratricopeptide repeat protein 6
Organism
rtem
Rana temporaria (common frog)
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
120921092 (TTC6)
Domain-containing proteins not elsewhere classified [BR:
rtem04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
120921092 (TTC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_9
TPR_11
TPR_8
TPR_17
TPR_16
TPR_19
TPR_14
TPR_12
ARM_TT21_N
TPR_6
TPR_CcmH_CycH
ANAPC3
ARM_TT21_C
ARM_TT21_2nd
PPTA
ARM_TT21
ARM_TT21_4th
TPR_21
TPR_MalT
TPR_Slam
ARM_TT21_5th
GCIP_C
Motif
Other DBs
NCBI-GeneID:
120921092
NCBI-ProteinID:
XP_040189672
LinkDB
All DBs
Position
13:44944195..45118870
Genome browser
AA seq
1935 aa
AA seq
DB search
MSDGRGHLHLRLNYAEELRIKKELERLLKPPQRTVKQDTVDFRSSSPLSLTPDPTLSQFK
QLYSTSRPRSKVTGRPAQPTCQSPSASDLPQDSMIDSTEKKHQKVGGSVKSPVPCSRDAT
QELQEEKYLQSDQSSFIHKQYEKTNHRVERPAIASMVGTTKPISIFQRPRPPAKLRSTMT
QNFSKPRTSVKPTAVQKKVTRKLKVIQAPSSEIRKAVDERSSKSSDGSNSSSSSDSEYSD
DSEKRARSTKKKKKKVSKKMKTLATPERENVEGGNLTPSVLLPEQLYEATYTSAVCKNHE
LDETTDKTAEGIHTAYLMPPMKTTARSVDEIIASLYSPQTHTESDMMIKQLMESVLGLNY
SLTFGKPEEERNVTYEPEISQPVLEDQERSSVESPSSQQQRPLDPGTDVALTDSKLSIEL
SFTDKDEEDTIQQISISTQENPTTPLQEEEMTDEEAKQVLRCAAQVTISDIIHVKGDAVP
LTRRETATTRPPVALLATWKPRTKSASHQTIHHLCTVSPSHVLPSTLQLASRVQHTVNRR
GHWSDVEVLREKNNFFPDDSKDRMRILQEGIPTSMLQSQGQSGGVVTLPPHSEHSLEEWQ
RIAEYYVEGPRMELIGEQASLNSETLKMFWAPAPPKFSAPLSLMQETLFSKYESCLDEQE
ATEGLLSMETESESSEEETMDPEDLAKLDRVLSRRHDSLPNIGFPTLSAPKLKKTHSSSS
PNISISGESKFHLSADFQTSMKELAAWKQQHYRPLEAVTVCAGEETEEQKPQIIPGISAQ
TDLFTDQDKELTYTEVGAVQQQTLRHVKRKKYKKKKGHLDPKKLKIILQELKRPLQSLKR
SVSVERIPIGSRPTQHLRSSSLPRQLDFSFFIRTQGGAQTGQDLREWVRDIWNSWFDEVF
PPSQTPMEDEAQYYDIAGPAILPDPEKKETPLTAGLDSVPPVLVEDPAASVQDVESEISY
LTSLIEKQERPSVFHYCRRGALHRKLGNLHLALQDLDMVIKQEPQLLDAYWHRHLIFLLQ
GKTNEALDDLNFIIKYNKTHADAYLSKAEIYKQKKDYTLAIVNYTQALKCQPTNDDIYFR
RAQMYEAQDELIIAMDNYAQCFSHNPSRTDALMKHGMYYFANSNWGAAVQDFTAAIKQDF
TNVEARTFRGRAYTKLARYNEAAEDFSAIIHLDPKNWMAFYYRGCLLRKCYPHHALQDFS
ISVLLYDDFENLNAFLQRGILYTDLGLSSEATFDFEHVLTLDRTVAVAHVNLGLICLLHR
EQYSQAVHHFSAAIKVDPLCVRAYLCRAQAYRQQKDLQNALKDITRAIHLHPDSPEPYII
RGQYLYEMKRYDLASFCIYHAAEMTQGSSPVQQALVQSFRRQYNNAIECLVSANKQKPAP
ALMILLGKIQMKAKKNKDAAESFRQALEIMGHSDERSSTSDRAEIFYLLGICYMEQFKFL
QALEALTSAVKTRSGYCDAYYQRGLCRMRLQQAGCVQDFNRALEINPTHFQAYLCRAAFY
GFRKRYSKAIMNCNAAIKVQPHSVRAYLYRGALKYYIKAYKLAILDLTKAAELDPSCSLI
YYNRGVCYHQMKMYEEALKDYAIVLILGGWKEADVKVLVNRGLLYLELHDYANSLEDFKA
VASKAPGDIKIHQAIGDCHHRLQQYEEAVQAFNQVLQLNPLSPEGYIGRGNAYMEYGHKE
GFRYAQMDFVKALHLNPMCTAARICLGYNLQAQGSYQKAWNQFTIALDINPQSLLGFEGR
AIVSLQMGDTFAALQDMNAAIKLGVTAQLLTNRGVIHQFMGKLPNAMRDYQSAIAANPKY
SLAYFNAANLYLHNRQFSQAKEYYSRAMELDPSNESATLNRGITNMLLQDVQGALQDFHM
VIDQCPVSSAAYFNRASLHKTLQQYDEAESDISQAMILQPGDPLMYKLRADIRGKMGMTK
EAIEDYEQAIYLLQQ
NT seq
5808 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggaagagggcatttgcatttgagactcaattatgcagaggagttgagaatc
aagaaagagctggaaagattgcttaagcctcctcagaggactgtcaagcaggacacggtg
gatttcaggagtagctcgcccctgtctctaacgcccgatcctactttatcccaatttaaa
cagctttattcaacctcacgcccaagatctaaggtcacaggcagaccggctcaacccact
tgccaatctccatcagcctctgatctgcctcaagactctatgattgacagtactgagaaa
aaacatcagaaagttggtggatcggtaaaaagtccagtgccttgctcaagagatgccaca
caagagttacaagaagaaaaatatctgcaaagtgatcagtcatcctttatccataaacaa
tatgagaagaccaaccatagagtagagagacctgcaattgcatcaatggttggaaccacc
aagcctatatcaatttttcaacggccaagaccacctgcaaagctcaggtctaccatgact
cagaatttctccaagccacgcacgtctgtgaagcccacagcggtccagaagaaggtgaca
cgaaaactgaaggtgatacaagctccatccagcgagataaggaaggctgtcgatgagagg
tccagcaaaagcagtgatggcagcaattcttcttcaagctctgactctgagtacagcgac
gactcggagaaaagagcaagaagtacaaagaagaaaaagaaaaaagtttcaaagaaaatg
aaaacattggccacaccagaacgagaaaatgttgaaggtggcaatttgactcctagtgtg
ctgttgccagagcaactctatgaagcaacttatacatcggctgtatgtaaaaaccatgaa
cttgatgaaaccactgataaaactgcagagggcatacataccgcatacctaatgccaccg
atgaagaccacggctaggtcggtggatgaaataattgcatcactgtattctccacagaca
catacagaatcagatatgatgattaaacagttgatggagagtgttttgggccttaactat
agcctcacatttgggaaaccagaagaagaaaggaatgtgacatatgagccagagatatca
caaccagtgctggaagatcaggaacggtcatctgtagaaagtccatcttcacagcagcag
agacctctggatccaggcacagatgttgcattgactgatagcaagctgtctatagaatta
tctttcacggacaaggatgaggaagataccattcagcaaatatctatctcgacccaagag
aaccctaccacaccattgcaggaagaggaaatgacagatgaagaagctaaacaagtacta
agatgtgctgcgcaggtcaccatctcggacatcattcatgtgaagggggatgcagtgcca
ctgacaagacgggagacagcaacaacacgccctcctgtggctcttcttgccacctggaaa
ccgagaaccaaatctgcttctcatcaaacaatccatcatctctgcacagtatcccccagc
catgtcttaccaagcaccctgcagctggcatcacgagtacagcacacggtaaacagaaga
ggccattggtctgatgttgaggtcttacgagaaaaaaacaacttcttcccagatgattcc
aaagacagaatgcgaattttgcaggaagggatccctacttcaatgcttcagtcacagggc
cagagtggtggtgttgtcactctgccccctcatagtgaacatagcttagaggagtggcag
agaattgctgagtattatgtggaaggacctcgtatggagctcattggagagcaggcatct
ctgaactctgaaaccttgaagatgttttgggcaccagctcctcctaagttctctgcccct
ctgtctttaatgcaggaaactttgttctccaaatatgagagctgcttagatgaacaggaa
gccacagaaggattactgtcgatggagactgaaagtgagtcatcagaggaagagactatg
gacccagaagaccttgcaaagctggacagagttttatctcgaagacatgattctttacca
aacattggttttccaactttatctgctccaaagcttaagaaaacacactcttcttcttct
ccaaatatatcgatctcaggggaaagtaaattccatctttcagctgactttcaaacaagt
atgaaggagcttgcagcatggaagcaacaacattacaggcctctagaagctgtaactgtc
tgtgcaggtgaagaaacagaggagcaaaaaccccaaataattccaggcatctctgcacag
acagacttatttactgaccaagacaaagagttgacttatacagaggtgggggctgttcaa
caacagactttgaggcatgtcaagaggaagaaatataagaagaagaaaggacacttggat
cctaagaaactgaaaattatattacaggagctaaaacgaccactgcagagtcttaaaaga
tctgtgtccgttgaaagaatccccattggttcaagaccaactcagcatctgcggagctcc
agtctccctcgccagttggacttttcattcttcataagaacacagggtggtgcccaaact
ggtcaggatcttcgagaatgggtgagagacatctggaatagttggtttgatgaagttttt
ccaccaagtcagacacctatggaagatgaagcacagtactatgatatagctggtcctgca
attctgcctgatcctgaaaagaaggagacaccattgacagcaggcttggattcagtaccg
cctgtgcttgtagaggacccagcagcatctgtgcaagatgtggagagtgagatttcctat
ctcaccagtttaatagagaagcaggagagaccatctgtattccactactgcagaagaggt
gctttgcacagaaaactaggcaatctacaccttgccttacaagatttagatatggttata
aaacaggagccacaactgctggatgcatattggcatagacatctgattttcttgctgcag
gggaagacaaacgaggctctagatgacttgaacttcattattaaatataataaaacacat
gcagatgcgtacttgtccaaagctgagatatacaagcagaagaaggactacactttggct
atagtgaactatacacaagctcttaaatgtcagccaacgaacgatgacatctatttccgg
cgggcacaaatgtacgaggctcaggatgaacttattatagccatggataattatgctcag
tgcttttcccataatcccagtcggacagatgctcttatgaagcatggcatgtactatttt
gcgaacagcaactggggtgcagcagtacaggacttcacagctgccatcaaacaggacttt
actaatgtggaggccagaactttccgtggaagagcttacaccaagctagctcgctacaat
gaggcagcagaagacttttcggctattattcatttggatcccaagaactggatggctttt
tattacagaggatgtttgctgcgcaagtgctatccacaccatgccctgcaagacttcagc
atttctgtgcttctttatgatgactttgaaaatctgaatgcttttcttcagcgtggtatc
ctttacacagacctaggactgtcgtctgaggctacatttgactttgaacatgtactaact
ttggataggactgtggctgtggcacatgtgaatttgggtctaatctgccttctgcaccga
gaacaatattcccaagcagtccaccacttctctgcagctataaaagtggaccctctctgt
gttagggcatatctctgcagggcacaagcttacagacagcaaaaagatttgcagaatgca
ttaaaggatataacccgtgccatccatctgcatccagactcaccggaaccatatataatc
cggggacagtatctgtatgagatgaagagatatgatcttgccagcttctgcatttaccac
gcagctgagatgactcaaggttcctcaccggttcagcaagccttggtccagtccttccgc
aggcaatacaacaatgccattgaatgcctggtttctgccaataaacagaagccagctccg
gccctgatgatcctcttaggaaaaatacaaatgaaggcaaagaaaaacaaggatgcagcg
gaaagctttagacaggctctggaaataatgggtcattcagatgagaggtcatccacctct
gacagggcagagatcttctacctgttgggtatttgttacatggagcagttcaagttctta
caggcacttgaggctctgactagcgctgtgaaaacccgttcaggttattgtgatgcttat
tatcagcgtggattgtgccgtatgcgtctacagcaagccggctgtgtgcaggacttcaac
agggctcttgaaatcaacccaacacatttccaggcctatttgtgtcgagcagcgttctat
ggattcagaaagagatactcaaaagctatcatgaactgcaatgctgcaatcaaagtacag
ccacacagcgtaagagcttatctctacagaggagcattaaagtactacataaaggcatat
aaactggccattctggatttaacaaaagctgcagagttggatccatcctgctctcttata
tactacaacagaggagtttgttaccatcagatgaagatgtatgaggaggctttgaaagat
tatgctattgtacttattctgggaggatggaaagaagctgatgttaaagttcttgttaat
cgcggattgctttaccttgagcttcatgattatgccaattcattggaggacttcaaagct
gtggctagcaaagcccctggagacataaagatccatcaggcaataggagactgccatcac
agactgcagcagtacgaagaggctgtgcaggcatttaatcaggttctgcagctaaacccc
ttatctccagaaggatacattggccgtggcaatgcctacatggaatatggccataaagag
ggattcagatatgctcagatggattttgtgaaggctcttcatctgaatcctatgtgcact
gctgctaggatttgcctgggttataacttacaggcacagggatcctatcagaaagcctgg
aaccagtttacaatagccttggatatcaatccacagagcttgctagggtttgaaggccgt
gctattgtcagcttacagatgggggacacatttgctgcacttcaagacatgaacgctgca
ataaagcttggtgtaacggcacagctgctaacaaaccgaggtgttatccaccagttcatg
gggaagttgccaaatgctatgagagattatcaatcggcaattgcagccaatccaaaatac
tctctggcttacttcaatgcagctaatctgtatcttcacaaccgtcagttctcacaggca
aaagaatactactctcgagccatggagctagatcccagcaatgaatcggccactctgaac
agaggtattactaacatgcttttacaagacgtgcaaggagctcttcaagacttccacatg
gtcattgatcagtgcccagtatcctctgctgcatacttcaatcgtgctagcctacataaa
actttacagcagtatgatgaagctgagagtgacatatcccaggctatgattcttcaacct
ggagaccccctgatgtataagcttcgagcagatatcagaggaaaaatgggaatgaccaaa
gaagccattgaagattatgaacaagcaatatatctcctgcagcagtga
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integrated database retrieval system
