Rana temporaria (common frog): 120921162
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Entry
120921162 CDS
T07929
Symbol
NFKBIA
Name
(RefSeq) NF-kappa-B inhibitor alpha
KO
K04734
NF-kappa-B inhibitor alpha
Organism
rtem
Rana temporaria (common frog)
Pathway
rtem04210
Apoptosis
rtem04519
Cadherin signaling
rtem04620
Toll-like receptor signaling pathway
rtem04621
NOD-like receptor signaling pathway
rtem04622
RIG-I-like receptor signaling pathway
rtem04623
Cytosolic DNA-sensing pathway
rtem04625
C-type lectin receptor signaling pathway
rtem04920
Adipocytokine signaling pathway
rtem05132
Salmonella infection
rtem05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rtem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120921162 (NFKBIA)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120921162 (NFKBIA)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120921162 (NFKBIA)
04621 NOD-like receptor signaling pathway
120921162 (NFKBIA)
04622 RIG-I-like receptor signaling pathway
120921162 (NFKBIA)
04623 Cytosolic DNA-sensing pathway
120921162 (NFKBIA)
04625 C-type lectin receptor signaling pathway
120921162 (NFKBIA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
120921162 (NFKBIA)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120921162 (NFKBIA)
09171 Infectious disease: bacterial
05132 Salmonella infection
120921162 (NFKBIA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtem03000
]
120921162 (NFKBIA)
04131 Membrane trafficking [BR:
rtem04131
]
120921162 (NFKBIA)
Transcription factors [BR:
rtem03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
120921162 (NFKBIA)
Membrane trafficking [BR:
rtem04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
120921162 (NFKBIA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
ANK_LRRK2
Ank_KRIT1
RecX_HTH1
Motif
Other DBs
NCBI-GeneID:
120921162
NCBI-ProteinID:
XP_040189798
LinkDB
All DBs
Position
13:41690293..41696882
Genome browser
AA seq
365 aa
AA seq
DB search
MRKAASSALGTHSSLYTPSTEHLPDYSSTQHRTFLGLLLLNRWRRITMSARFVDYSGNMG
VDGDLRIHGKDKHFQNTEDRTDSGLDSLKEEDYDSIVTGVKNICIPRLAEPQDYEPEPWK
LQANEDGDTLLHLAIIHGAKDLAGEAIKRSYRDGYYLNCQNNLHQTPLHVATITEEAEIA
EKLLQAGCDPEVRDYRGNTALHIACERGSLRGVGVIVQYSKFQIPSLLQCSNYDGHTCLH
LASSKGFLAIVEHLISLGADVNAQEPCNGRTALHMAVDKQNPDLMFLLLKNGADVNKVTY
QGYSPCQLTWGRNNSQIQQHLLSVTEKSLQYLPESEDEDSSDSESEHSDDEYMYDDCKLM
CQGLN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagcggcgagctcagccctcggcactcactcctctctatatacaccgagcacg
gagcacctaccggactactcatctacacagcatcgtactttccttggattgttgttgttg
aatcgttggagaaggatcaccatgtctgcccgctttgtggattactctgggaatatgggg
gtggatggagatctcaggatacacggcaaggacaagcacttccagaacaccgaggatcgc
accgacagcggcctggactccctgaaagaggaggactatgacagcatcgtcactggcgtc
aagaacatttgtattccgagattggccgagccacaggactacgagcccgagccatggaag
cttcaggccaacgaggatggagatacgcttctccacctcgcaattatccatggggctaaa
gatcttgcaggagaagcaatcaagagatcatacagagatggatattatctgaactgccag
aataaccttcaccagacaccacttcatgtggctacaatcacagaggaagctgaaattgct
gaaaaactcctccaagctggttgcgacccggaagtcagagattaccgcggaaataccgcc
ttacacattgcctgcgagcggggatccctacgcggagttggcgtcatagtacaatacagc
aaattccagattccctctcttctgcagtgctccaattatgatggtcatacatgtctacac
ctagcatccagtaaaggctttcttgccattgtggaacacttgatcagtctgggagcagat
gttaatgctcaggagccttgcaatgggcgcacagctctccacatggctgtggataaacag
aacccagacttgatgtttctgttgctcaagaacggagccgatgtgaacaaagttacatac
caaggctactcgccatgccaacttacctggggaaggaataactctcaaatccagcagcac
ctactgtctgtgaccgagaagagcttacagtaccttccagagagtgaggacgaggacagt
tcggactccgaatcagaacattcagatgatgagtatatgtacgatgactgcaagttgatg
tgccaaggtctgaattag
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